Task 5981818

Name	07513856_109_0
Workunit	4879725
Created	6 Oct 2019, 10:27:28 UTC
Sent	6 Oct 2019, 10:27:37 UTC
Report deadline	11 Oct 2019, 10:27:37 UTC
Received	6 Oct 2019, 10:56:13 UTC
Server state	Over
Outcome	Computation error
Client state	Compute error
Exit status	194 (0x000000C2) EXIT_ABORTED_BY_CLIENT
Computer ID	3706
Run time	3 min 57 sec
CPU time	1 min 51 sec
Validate state	Invalid
Credit	0.00
Device peak FLOPS	5.03 GFLOPS
Application version	boinc2docker v1.12 (vbox64_mt) x86_64-pc-linux-gnu
Peak working set size	1.90 GB
Peak swap size	3.64 GB
Peak disk usage	1.21 GB
Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<message>
finish file present too long</message>
<stderr_txt>
2019-10-06 11:37:29 (63111): vboxwrapper (7.7.26197): starting
2019-10-06 11:37:29 (63111): Feature: Checkpoint interval offset (108 seconds)
2019-10-06 11:37:29 (63111): Detected: VirtualBox VboxManage Interface (Version: 5.2.32)
2019-10-06 11:37:29 (63111): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-10-06 11:37:29 (63111): Create VM. (boinc_3f153e98eff0c666, slot#17)
2019-10-06 11:37:29 (63111): Updating drive controller type and model for desired configuration.
2019-10-06 11:37:37 (63111): Setting Memory Size for VM. (3072MB)
2019-10-06 11:37:58 (63111): Setting CPU Count for VM. (1)
2019-10-06 11:37:58 (63111): Setting Chipset Options for VM.
2019-10-06 11:37:58 (63111): Setting Boot Options for VM.
2019-10-06 11:37:59 (63111): Setting Network Configuration for NAT.
2019-10-06 11:37:59 (63111): Enabling VM Network Access.
2019-10-06 11:37:59 (63111): Disabling USB Support for VM.
2019-10-06 11:37:59 (63111): Disabling COM Port Support for VM.
2019-10-06 11:37:59 (63111): Disabling LPT Port Support for VM.
2019-10-06 11:38:00 (63111): Disabling Audio Support for VM.
2019-10-06 11:38:00 (63111): Disabling Clipboard Support for VM.
2019-10-06 11:38:00 (63111): Disabling Drag and Drop Support for VM.
2019-10-06 11:38:00 (63111): Adding storage controller(s) to VM.
2019-10-06 11:38:04 (63111): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2019-10-06 11:38:04 (63111): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-10-06 11:38:12 (63111): Enabling shared directory for VM.
2019-10-06 11:38:12 (63111): Starting VM. (boinc_3f153e98eff0c666, slot#17)
2019-10-06 11:38:13 (63111): Successfully started VM. (PID = '65384')
2019-10-06 11:38:13 (63111): Reporting VM Process ID to BOINC.
2019-10-06 11:38:13 (63111): Guest Log: BIOS: VirtualBox 5.2.32
2019-10-06 11:38:13 (63111): Guest Log: CPUID EDX: 0x078bfbff
2019-10-06 11:38:14 (63111): VM state change detected. (old = 'poweroff', new = 'running')
2019-10-06 11:38:14 (63111): Preference change detected
2019-10-06 11:38:14 (63111): Setting CPU throttle for VM. (100%)
2019-10-06 11:38:14 (63111): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 600 seconds))
2019-10-06 11:38:16 (63111): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-10-06 11:38:16 (63111): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2019-10-06 11:38:16 (63111): Guest Log: BIOS: Boot from Hard Disk 0 failed
2019-10-06 11:38:16 (63111): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2019-10-06 11:38:16 (63111): Guest Log: BIOS: Booting from CD-ROM...
2019-10-06 11:38:39 (63111): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-10-06 11:38:39 (63111): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2019-10-06 11:38:47 (63111): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-10-06 11:38:47 (63111): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-10-06 11:39:00 (63111): Guest Log: net.ipv4.ip_forward = 1
2019-10-06 11:39:00 (63111): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2019-10-06 11:39:00 (63111): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-10-06 11:39:00 (63111): Guest Log: sysctl: "cannot stat %s" is an unknown key
2019-10-06 11:39:00 (63111): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-10-06 11:39:00 (63111): Guest Log: Segmentation fault
2019-10-06 11:39:00 (63111): Guest Log: automount ...
2019-10-06 11:39:00 (63111): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2019-10-06 11:39:00 (63111): Guest Log: automount over.
2019-10-06 11:39:00 (63111): Guest Log: [1;32mSetting hostname to [1;35mboot2docker[0;39m [1;32mDone.[0;39m
2019-10-06 11:39:00 (63111): Guest Log: Sun Oct  6 11:38:58 UTC 2019 dhcp -------------------------------
2019-10-06 11:39:06 (63111): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2019-10-06 11:39:06 (63111): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1316)
2019-10-06 11:39:07 (63111): Guest Log: Sun Oct  6 11:39:04 UTC 2019 dhcp -------------------------------
2019-10-06 11:39:07 (63111): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-10-06 11:39:07 (63111): Guest Log: 00:00:00.000090 main     Log opened 2019-10-06T11:39:04.740280000Z
2019-10-06 11:39:07 (63111): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-10-06 11:39:07 (63111): Guest Log: 00:00:00.000090 main     Log opened 2019-10-06T11:39:04.740280000Z
2019-10-06 11:39:07 (63111): Guest Log: 00:00:00.002788 main     OS Product: Linux
2019-10-06 11:39:07 (63111): Guest Log: 00:00:00.002788 main     OS Product: Linux
2019-10-06 11:39:07 (63111): Guest Log: 00:00:00.003733 main     OS Release: 4.1.19-boot2docker
2019-10-06 11:39:07 (63111): Guest Log: 00:00:00.003775 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-10-06 11:39:07 (63111): Guest Log: 00:00:00.003811 main     Executable: /sbin/VBoxService
2019-10-06 11:39:07 (63111): Guest Log: 00:00:00.003812 main     Process ID: 834
2019-10-06 11:39:07 (63111): Guest Log: 00:00:00.003813 main     Package type: LINUX_64BITS_GENERIC
2019-10-06 11:39:07 (63111): Guest Log: 00:00:00.003733 main     OS Release: 4.1.19-boot2docker
2019-10-06 11:39:07 (63111): Guest Log: 00:00:00.003775 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-10-06 11:39:07 (63111): Guest Log: 00:00:00.003811 main     Executable: /sbin/VBoxService
2019-10-06 11:39:07 (63111): Guest Log: 00:00:00.003812 main     Process ID: 834
2019-10-06 11:39:07 (63111): Guest Log: 00:00:00.003813 main     Package type: LINUX_64BITS_GENERIC
2019-10-06 11:39:07 (63111): Guest Log: 00:00:00.028604 main     5.0.16 r105871 started. Verbose level = 0
2019-10-06 11:39:07 (63111): Guest Log: 00:00:00.028604 main     5.0.16 r105871 started. Verbose level = 0
2019-10-06 11:39:07 (63111): Guest Log: 00:00:00.033455 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2019-10-06 11:39:07 (63111): Guest Log: 00:00:00.033513 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2019-10-06 11:39:07 (63111): Guest Log: Mounting BOINC shared/...
2019-10-06 11:39:07 (63111): Guest Log: -------------------
2019-10-06 11:39:07 (63111): Guest Log: Sun Oct  6 10:39:06 UTC 2019
2019-10-06 11:39:12 (63111): Guest Log: 00:00:05.033914 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2019-10-06 11:39:12 (63111): Guest Log: Sun Oct  6 10:39:11 UTC 2019
2019-10-06 11:39:12 (63111): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2019-10-06 11:39:12 (63111): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2019-10-06 11:39:12 (63111): Guest Log:     inet 127.0.0.1/8 scope host lo
2019-10-06 11:39:12 (63111): Guest Log:        valid_lft forever preferred_lft forever
2019-10-06 11:39:12 (63111): Guest Log:     inet6 ::1/128 scope host 
2019-10-06 11:39:12 (63111): Guest Log:        valid_lft forever preferred_lft forever
2019-10-06 11:39:12 (63111): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2019-10-06 11:39:12 (63111): Guest Log:        valid_lft forever preferred_lft forever
2019-10-06 11:39:12 (63111): Guest Log:     inet6 fe80::a00:27ff:fea1:d1e3/64 scope link 
2019-10-06 11:39:12 (63111): Guest Log:        valid_lft forever preferred_lft forever
2019-10-06 11:39:12 (63111): Guest Log: -------------------
2019-10-06 11:39:12 (63111): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2019-10-06 11:39:12 (63111): Guest Log: Waiting for Docker daemon to start...
2019-10-06 11:39:13 (63111): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2019-10-06 11:39:13 (63111): Guest Log: Running boinc_app...
2019-10-06 11:39:13 (63111): Guest Log: Importing Docker image from BOINC...
2019-10-06 11:39:13 (63111): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-10-06 11:39:13 (63111): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /
2019-10-06 11:39:13 (63111): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-10-06 11:39:13 (63111): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-10-06 11:39:13 (63111): Guest Log: shared                  221.3G     43.7G    177.6G  20% /root/shared
2019-10-06 11:39:13 (63111): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /var/lib/docker/aufs
2019-10-06 11:39:17 (63111): Guest Log: 00:00:10.034867 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2019-10-06 11:39:19 (63111): Guest Log: doing docker load...
2019-10-06 11:39:31 (63111): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-10-06 11:39:31 (63111): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2019-10-06 11:39:31 (63111): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-10-06 11:39:31 (63111): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-10-06 11:39:31 (63111): Guest Log: shared                  221.3G     42.9G    178.4G  19% /root/shared
2019-10-06 11:39:31 (63111): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /var/lib/docker/aufs
2019-10-06 11:39:31 (63111): Guest Log:               total        used        free      shared  buff/cache   available
2019-10-06 11:39:31 (63111): Guest Log: Mem:           3007          50        2254         663         702        2255
2019-10-06 11:39:31 (63111): Guest Log: Swap:           700           0         700
2019-10-06 11:39:31 (63111): Guest Log: Building apps directory...
2019-10-06 11:48:24 (63111): Guest Log: Prerun diagnostics...
2019-10-06 11:48:27 (63111): Guest Log: REPOSITORY                    TAG                 IMAGE ID            CREATED             SIZE
2019-10-06 11:48:27 (63111): Guest Log: nanohub_apps_share64_matlab   4                   32c863520615        22 months ago       488.2 MB
2019-10-06 11:48:27 (63111): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2019-10-06 11:48:27 (63111): Guest Log: 499.0M	/var/lib/docker
2019-10-06 11:48:27 (63111): Guest Log:               total        used        free      shared  buff/cache   available
2019-10-06 11:48:27 (63111): Guest Log: Mem:           3007          38        2255         663         713        2265
2019-10-06 11:48:27 (63111): Guest Log: Swap:           700           0         700
2019-10-06 11:48:27 (63111): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-10-06 11:48:27 (63111): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2019-10-06 11:48:27 (63111): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-10-06 11:48:27 (63111): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-10-06 11:48:27 (63111): Guest Log: shared                  221.3G     55.0G    166.3G  25% /root/shared
2019-10-06 11:48:27 (63111): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /var/lib/docker/aufs
2019-10-06 11:48:27 (63111): Guest Log: Running... 
2019-10-06 11:48:28 (63111): Guest Log: 07513856_109.boinc
2019-10-06 11:48:28 (63111): Guest Log: 07513856_109.sh
2019-10-06 11:53:51 (63111): Guest Log: boinc_app exited (0)
2019-10-06 11:53:51 (63111): Guest Log: Saving results...
2019-10-06 11:53:51 (63111): Guest Log: 07513856_109_output.tar.gz
2019-10-06 11:53:51 (63111): VM Completion File Detected.
2019-10-06 11:53:51 (63111): Powering off VM.
2019-10-06 11:53:53 (63111): Status Report: virtualbox/vboxheadless is no longer running.
2019-10-06 11:53:53 (63111): Successfully stopped VM.
2019-10-06 11:53:53 (63111): Deregistering VM. (boinc_3f153e98eff0c666, slot#17)
2019-10-06 11:53:53 (63111): Removing network bandwidth throttle group from VM.
2019-10-06 11:53:54 (63111): Removing storage controller(s) from VM.
2019-10-06 11:53:54 (63111): Removing VM from VirtualBox.
2019-10-06 11:53:55 (63111): Removing virtual ISO 9660 disk from VirtualBox.
11:54:00 (63111): called boinc_finish(0)

</stderr_txt>
]]>