Task 124289

Name	06424524_002_2
Workunit	89695
Created	14 Jan 2018, 6:53:39 UTC
Sent	14 Jan 2018, 7:39:51 UTC
Report deadline	14 Jan 2018, 15:39:51 UTC
Received	14 Jan 2018, 9:57:46 UTC
Server state	Over
Outcome	Computation error
Client state	Compute error
Exit status	194 (0x000000C2) EXIT_ABORTED_BY_CLIENT
Computer ID	218
Run time	7 min 35 sec
CPU time	3 min 1 sec
Validate state	Invalid
Credit	0.00
Device peak FLOPS	2.24 GFLOPS
Application version	boinc2docker v1.11 (vbox64_mt) x86_64-pc-linux-gnu
Peak working set size	93.56 MB
Peak swap size	3.66 GB
Peak disk usage	1.69 GB
Stderr output

<core_client_version>7.4.23</core_client_version>
<![CDATA[
<message>
finish file present too long
</message>
<stderr_txt>
2018-01-14 04:38:54 (5607): vboxwrapper (7.7.26197): starting
2018-01-14 04:38:54 (5607): Feature: Checkpoint interval offset (247 seconds)
2018-01-14 04:38:54 (5607): Detected: VirtualBox VboxManage Interface (Version: 5.1.8)
2018-01-14 04:38:54 (5607): Detected: Minimum checkpoint interval (600.000000 seconds)
2018-01-14 04:38:54 (5607): Create VM. (boinc_8e5db00e2336d9f0, slot#6)
2018-01-14 04:38:54 (5607): Updating drive controller type and model for desired configuration.
2018-01-14 04:39:02 (5607): Setting Memory Size for VM. (3072MB)
2018-01-14 04:39:02 (5607): Setting CPU Count for VM. (1)
2018-01-14 04:39:03 (5607): Setting Chipset Options for VM.
2018-01-14 04:39:03 (5607): Setting Boot Options for VM.
2018-01-14 04:39:03 (5607): Setting Network Configuration for NAT.
2018-01-14 04:39:03 (5607): Enabling VM Network Access.
2018-01-14 04:39:04 (5607): Disabling USB Support for VM.
2018-01-14 04:39:04 (5607): Disabling COM Port Support for VM.
2018-01-14 04:39:04 (5607): Disabling LPT Port Support for VM.
2018-01-14 04:39:05 (5607): Disabling Audio Support for VM.
2018-01-14 04:39:05 (5607): Disabling Clipboard Support for VM.
2018-01-14 04:39:05 (5607): Disabling Drag and Drop Support for VM.
2018-01-14 04:39:06 (5607): Adding storage controller(s) to VM.
2018-01-14 04:39:06 (5607): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2018-01-14 04:39:06 (5607): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2018-01-14 04:39:06 (5607): Enabling shared directory for VM.
2018-01-14 04:39:07 (5607): Starting VM. (boinc_8e5db00e2336d9f0, slot#6)
2018-01-14 04:39:09 (5607): Successfully started VM. (PID = '6353')
2018-01-14 04:39:09 (5607): Reporting VM Process ID to BOINC.
2018-01-14 04:39:09 (5607): Guest Log: BIOS: VirtualBox 5.1.8
2018-01-14 04:39:09 (5607): VM state change detected. (old = 'poweroff', new = 'running')
2018-01-14 04:39:09 (5607): Preference change detected
2018-01-14 04:39:09 (5607): Setting CPU throttle for VM. (75%)
2018-01-14 04:39:10 (5607): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2018-01-14 04:39:10 (5607): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2018-01-14 04:39:10 (5607): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2018-01-14 04:39:10 (5607): Guest Log: BIOS: Boot from Hard Disk 0 failed
2018-01-14 04:39:10 (5607): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2018-01-14 04:39:10 (5607): Guest Log: BIOS: Booting from CD-ROM...
2018-01-14 04:39:23 (5607): Guest Log: BIOS: KBD: unsupported int 16h function 03
2018-01-14 04:39:23 (5607): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2018-01-14 04:39:43 (5607): Guest Log: net.ipv4.ip_forward = 1
2018-01-14 04:39:43 (5607): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2018-01-14 04:39:43 (5607): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-01-14 04:39:43 (5607): Guest Log: sysctl: "cannot stat %s" is an unknown key
2018-01-14 04:39:43 (5607): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-01-14 04:39:43 (5607): Guest Log: Segmentation fault
2018-01-14 04:39:44 (5607): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2018-01-14 04:39:44 (5607): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2018-01-14 04:39:44 (5607): Guest Log: automount ...
2018-01-14 04:39:46 (5607): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2018-01-14 04:39:47 (5607): Guest Log: automount over.
2018-01-14 04:39:47 (5607): Guest Log: [1;32mSetting hostname to [1;35mboot2docker[0;39m [1;32mDone.[0;39m
2018-01-14 04:39:47 (5607): Guest Log: Sun Jan 14 04:39:45 UTC 2018 dhcp -------------------------------
2018-01-14 04:39:52 (5607): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2018-01-14 04:39:52 (5607): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1314)
2018-01-14 04:39:53 (5607): Guest Log: Sun Jan 14 04:39:51 UTC 2018 dhcp -------------------------------
2018-01-14 04:39:54 (5607): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2018-01-14 04:39:54 (5607): Guest Log: 00:00:00.000814 main     Log opened 2018-01-14T04:39:52.749381000Z
2018-01-14 04:39:54 (5607): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2018-01-14 04:39:54 (5607): Guest Log: 00:00:00.000814 main     Log opened 2018-01-14T04:39:52.749381000Z
2018-01-14 04:39:54 (5607): Guest Log: 00:00:00.007061 main     OS Product: Linux
2018-01-14 04:39:54 (5607): Guest Log: 00:00:00.007061 main     OS Product: Linux
2018-01-14 04:39:54 (5607): Guest Log: 00:00:00.009116 main     OS Release: 4.1.19-boot2docker
2018-01-14 04:39:54 (5607): Guest Log: 00:00:00.009181 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-01-14 04:39:54 (5607): Guest Log: 00:00:00.009241 main     Executable: /sbin/VBoxService
2018-01-14 04:39:54 (5607): Guest Log: 00:00:00.009243 main     Process ID: 733
2018-01-14 04:39:54 (5607): Guest Log: 00:00:00.009244 main     Package type: LINUX_64BITS_GENERIC
2018-01-14 04:39:54 (5607): Guest Log: 00:00:00.009116 main     OS Release: 4.1.19-boot2docker
2018-01-14 04:39:54 (5607): Guest Log: 00:00:00.009181 main     OS Ver00:00:00.039013 main     5.0.16 r105871 started. Verbose level = 0
2018-01-14 04:39:54 (5607): Guest Log: sion: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-01-14 04:39:54 (5607): Guest Log: 00:00:00.009241 main     Executable: /sbin/VBoxService
2018-01-14 04:39:54 (5607): Guest Log: 00:00:00.009243 main     Process ID: 733
2018-01-14 04:39:54 (5607): Guest Log: 00:00:00.009244 main     Package type: LINUX_64BITS_GENERIC
2018-01-14 04:39:54 (5607): Guest Log: 00:00:00.039013 main     5.0.16 r105871 started. Verbose level = 0
2018-01-14 04:39:54 (5607): Guest Log: 00:00:00.062896 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2018-01-14 04:39:54 (5607): Guest Log: 00:00:00.063168 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2018-01-14 04:39:55 (5607): Guest Log: Mounting BOINC shared/...
2018-01-14 04:39:55 (5607): Guest Log: -------------------
2018-01-14 04:39:55 (5607): Guest Log: Sun Jan 14 09:39:54 UTC 2018
2018-01-14 04:39:59 (5607): Guest Log: 00:00:05.064493 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2018-01-14 04:40:00 (5607): Guest Log: Sun Jan 14 09:39:59 UTC 2018
2018-01-14 04:40:00 (5607): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2018-01-14 04:40:00 (5607): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2018-01-14 04:40:00 (5607): Guest Log:     inet 127.0.0.1/8 scope host lo
2018-01-14 04:40:00 (5607): Guest Log:        valid_lft forever preferred_lft forever
2018-01-14 04:40:00 (5607): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2018-01-14 04:40:00 (5607): Guest Log:     link/ether 9e:a7:03:36:6a:d8 brd ff:ff:ff:ff:ff:ff
2018-01-14 04:40:00 (5607): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2018-01-14 04:40:00 (5607): Guest Log:     link/ether 08:00:27:ce:48:f3 brd ff:ff:ff:ff:ff:ff
2018-01-14 04:40:00 (5607): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2018-01-14 04:40:00 (5607): Guest Log:        valid_lft forever preferred_lft forever
2018-01-14 04:40:00 (5607): Guest Log: -------------------
2018-01-14 04:40:00 (5607): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2018-01-14 04:40:00 (5607): Guest Log: Waiting for Docker daemon to start...
2018-01-14 04:40:03 (5607): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2018-01-14 04:40:03 (5607): Guest Log: Running boinc_app...
2018-01-14 04:40:03 (5607): Guest Log: Importing Docker image from BOINC...
2018-01-14 04:40:03 (5607): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-01-14 04:40:03 (5607): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /
2018-01-14 04:40:03 (5607): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-01-14 04:40:03 (5607): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-01-14 04:40:03 (5607): Guest Log: shared                  916.3G     79.3G    836.9G   9% /root/shared
2018-01-14 04:40:03 (5607): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /var/lib/docker/aufs
2018-01-14 04:40:04 (5607): Guest Log: 00:00:10.066562 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2018-01-14 04:40:38 (5607): Guest Log: doing docker load...
2018-01-14 04:41:08 (5607): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-01-14 04:41:08 (5607): Guest Log: tmpfs                     2.6G    721.5M      1.9G  27% /
2018-01-14 04:41:08 (5607): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-01-14 04:41:08 (5607): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-01-14 04:41:08 (5607): Guest Log: shared                  916.3G     79.9G    836.4G   9% /root/shared
2018-01-14 04:41:08 (5607): Guest Log: tmpfs                     2.6G    721.5M      1.9G  27% /var/lib/docker/aufs
2018-01-14 04:41:08 (5607): Guest Log:               total        used        free      shared  buff/cache   available
2018-01-14 04:41:08 (5607): Guest Log: Mem:           3007          49        2195         721         761        2196
2018-01-14 04:41:08 (5607): Guest Log: Swap:           702           0         702
2018-01-14 04:41:08 (5607): Guest Log: Building apps directory...
2018-01-14 04:41:13 (5607): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2018-01-14 04:41:22 (5607): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077_links.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2018-01-14 04:41:22 (5607): Guest Log: mv /root/shared/appsSource/rappture /root/shared/apps/share64/debian7/environ.d
2018-01-14 04:47:42 (5607): Guest Log: Prerun diagnostics...
2018-01-14 04:47:42 (5607): Guest Log: REPOSITORY                    TAG                 IMAGE ID            CREATED             SIZE
2018-01-14 04:47:42 (5607): Guest Log: nanohub_apps_share64_octave   5                   a3c939485731        5 weeks ago         547 MB
2018-01-14 04:47:42 (5607): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2018-01-14 04:47:42 (5607): Guest Log: 557.4M	/var/lib/docker
2018-01-14 04:47:42 (5607): Guest Log:               total        used        free      shared  buff/cache   available
2018-01-14 04:47:42 (5607): Guest Log: Mem:           3007          51        2190         721         765        2194
2018-01-14 04:47:42 (5607): Guest Log: Swap:           702           0         702
2018-01-14 04:47:42 (5607): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-01-14 04:47:42 (5607): Guest Log: tmpfs                     2.6G    721.5M      1.9G  27% /
2018-01-14 04:47:42 (5607): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-01-14 04:47:42 (5607): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-01-14 04:47:42 (5607): Guest Log: shared                  916.3G     83.2G    833.0G   9% /root/shared
2018-01-14 04:47:42 (5607): Guest Log: tmpfs                     2.6G    721.5M      1.9G  27% /var/lib/docker/aufs
2018-01-14 04:47:42 (5607): Guest Log: Running... 
2018-01-14 04:47:43 (5607): Guest Log: 06424524_002.boinc
2018-01-14 04:47:44 (5607): Guest Log: 06424524_002.sh
2018-01-14 04:48:31 (5607): Guest Log: boinc_app exited (0)
2018-01-14 04:48:31 (5607): Guest Log: Saving results...
2018-01-14 04:48:31 (5607): Guest Log: 06424524_002_output.tar.gz
2018-01-14 04:48:31 (5607): VM Completion File Detected.
2018-01-14 04:48:31 (5607): Powering off VM.
2018-01-14 04:48:35 (5607): Status Report: virtualbox/vboxheadless is no longer running.
2018-01-14 04:48:35 (5607): Successfully stopped VM.
2018-01-14 04:48:35 (5607): Deregistering VM. (boinc_8e5db00e2336d9f0, slot#6)
2018-01-14 04:48:35 (5607): Removing network bandwidth throttle group from VM.
2018-01-14 04:48:36 (5607): Removing storage controller(s) from VM.
2018-01-14 04:48:37 (5607): Removing VM from VirtualBox.
2018-01-14 04:48:38 (5607): Removing virtual ISO 9660 disk from VirtualBox.
04:48:43 (5607): called boinc_finish(0)

</stderr_txt>
]]>