Task 124526

Name 06424524_002_3
Workunit 89695
Created 14 Jan 2018, 9:57:50 UTC
Sent 14 Jan 2018, 10:01:01 UTC
Report deadline 14 Jan 2018, 18:01:01 UTC
Received 14 Jan 2018, 15:09:41 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 217
Run time 3 min 55 sec
CPU time 2 min 40 sec
Validate state Valid
Credit 1.52
Device peak FLOPS 2.24 GFLOPS
Application version boinc2docker v1.11 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 93.69 MB
Peak swap size 3.60 GB
Peak disk usage 591.37 MB

Stderr output

<core_client_version>7.4.23</core_client_version>
<![CDATA[
<stderr_txt>
2018-01-14 10:05:36 (16747): vboxwrapper (7.7.26197): starting
2018-01-14 10:05:36 (16747): Feature: Checkpoint interval offset (159 seconds)
2018-01-14 10:05:36 (16747): Detected: VirtualBox VboxManage Interface (Version: 5.1.8)
2018-01-14 10:05:36 (16747): Detected: Minimum checkpoint interval (600.000000 seconds)
2018-01-14 10:05:37 (16747): Create VM. (boinc_f4e1ab2ac205067d, slot#4)
2018-01-14 10:05:37 (16747): Updating drive controller type and model for desired configuration.
2018-01-14 10:05:38 (16747): Setting Memory Size for VM. (3072MB)
2018-01-14 10:05:38 (16747): Setting CPU Count for VM. (1)
2018-01-14 10:05:39 (16747): Setting Chipset Options for VM.
2018-01-14 10:05:39 (16747): Setting Boot Options for VM.
2018-01-14 10:05:39 (16747): Setting Network Configuration for NAT.
2018-01-14 10:05:39 (16747): Enabling VM Network Access.
2018-01-14 10:05:39 (16747): Disabling USB Support for VM.
2018-01-14 10:05:39 (16747): Disabling COM Port Support for VM.
2018-01-14 10:05:39 (16747): Disabling LPT Port Support for VM.
2018-01-14 10:05:39 (16747): Disabling Audio Support for VM.
2018-01-14 10:05:39 (16747): Disabling Clipboard Support for VM.
2018-01-14 10:05:39 (16747): Disabling Drag and Drop Support for VM.
2018-01-14 10:05:39 (16747): Adding storage controller(s) to VM.
2018-01-14 10:05:39 (16747): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2018-01-14 10:05:39 (16747): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2018-01-14 10:05:39 (16747): Enabling shared directory for VM.
2018-01-14 10:05:39 (16747): Starting VM. (boinc_f4e1ab2ac205067d, slot#4)
2018-01-14 10:05:41 (16747): Successfully started VM. (PID = '17255')
2018-01-14 10:05:41 (16747): Reporting VM Process ID to BOINC.
2018-01-14 10:05:41 (16747): Guest Log: BIOS: VirtualBox 5.1.8
2018-01-14 10:05:41 (16747): VM state change detected. (old = 'poweroff', new = 'running')
2018-01-14 10:05:41 (16747): Preference change detected
2018-01-14 10:05:41 (16747): Setting CPU throttle for VM. (75%)
2018-01-14 10:05:41 (16747): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2018-01-14 10:05:43 (16747): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2018-01-14 10:05:43 (16747): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2018-01-14 10:05:43 (16747): Guest Log: BIOS: Boot from Hard Disk 0 failed
2018-01-14 10:05:43 (16747): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2018-01-14 10:05:43 (16747): Guest Log: BIOS: Booting from CD-ROM...
2018-01-14 10:05:45 (16747): Guest Log: BIOS: KBD: unsupported int 16h function 03
2018-01-14 10:05:45 (16747): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2018-01-14 10:06:05 (16747): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2018-01-14 10:06:05 (16747): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2018-01-14 10:06:05 (16747): Guest Log: net.ipv4.ip_forward = 1
2018-01-14 10:06:05 (16747): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2018-01-14 10:06:05 (16747): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-01-14 10:06:05 (16747): Guest Log: sysctl: "cannot stat %s" is an unknown key
2018-01-14 10:06:05 (16747): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-01-14 10:06:05 (16747): Guest Log: Segmentation fault
2018-01-14 10:06:06 (16747): Guest Log: automount ...
2018-01-14 10:06:06 (16747): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2018-01-14 10:06:06 (16747): Guest Log: automount over.
2018-01-14 10:06:07 (16747): Guest Log: Setting hostname to boot2docker Done.
2018-01-14 10:06:07 (16747): Guest Log: Sun Jan 14 10:06:04 UTC 2018 dhcp -------------------------------
2018-01-14 10:06:12 (16747): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2018-01-14 10:06:12 (16747): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input5 (1296)
2018-01-14 10:06:12 (16747): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input5/event4 (1297)
2018-01-14 10:06:12 (16747): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1298)
2018-01-14 10:06:12 (16747): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1299)
2018-01-14 10:06:12 (16747): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1300)
2018-01-14 10:06:12 (16747): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1301)
2018-01-14 10:06:12 (16747): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1302)
2018-01-14 10:06:12 (16747): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1303)
2018-01-14 10:06:12 (16747): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1304)
2018-01-14 10:06:12 (16747): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1306)
2018-01-14 10:06:12 (16747): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1308)
2018-01-14 10:06:12 (16747): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1309)
2018-01-14 10:06:12 (16747): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1310)
2018-01-14 10:06:12 (16747): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1311)
2018-01-14 10:06:12 (16747): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1312)
2018-01-14 10:06:12 (16747): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1313)
2018-01-14 10:06:12 (16747): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1314)
2018-01-14 10:06:12 (16747): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1315)
2018-01-14 10:06:12 (16747): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1316)
2018-01-14 10:06:12 (16747): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1318)
2018-01-14 10:06:12 (16747): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1319)
2018-01-14 10:06:12 (16747): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1321)
2018-01-14 10:06:12 (16747): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:01 (1322)
2018-01-14 10:06:13 (16747): Guest Log: Sun Jan 14 10:06:10 UTC 2018 dhcp -------------------------------
2018-01-14 10:06:14 (16747): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2018-01-14 10:06:14 (16747): Guest Log: 00:00:00.000712 main     Log opened 2018-01-14T10:06:11.324624000Z
2018-01-14 10:06:14 (16747): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2018-01-14 10:06:14 (16747): Guest Log: 00:00:00.000712 main     Log opened 2018-01-14T10:06:11.324624000Z
2018-01-14 10:06:14 (16747): Guest Log: 00:00:00.006392 main     OS Product: Linux
2018-01-14 10:06:14 (16747): Guest Log: 00:00:00.006456 main     OS Release: 4.1.19-boot2docker
2018-01-14 10:06:14 (16747): Guest Log: 00:00:00.006513 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-01-14 10:06:14 (16747): Guest Log: 00:00:00.006566 main     Executable: /sbin/VBoxService
2018-01-14 10:06:14 (16747): Guest Log: 00:00:00.006568 main     Process ID: 732
2018-01-14 10:06:14 (16747): Guest Log: 00:00:00.006569 main     Package type: LINUX_64BITS_GENERIC
2018-01-14 10:06:14 (16747): Guest Log: 00:00:00.00639200:00:00.007803 main     5.0.16 r105871 started. Verbose level = 0
2018-01-14 10:06:14 (16747): Guest Log:  main     OS Product: Linux
2018-01-14 10:06:14 (16747): Guest Log: 00:00:00.006456 main     OS Release: 4.1.19-boot2docker
2018-01-14 10:06:14 (16747): Guest Log: 00:00:00.006513 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-01-14 10:06:14 (16747): Guest Log: 00:00:00.006566 main     Executable: /sbin/VBoxService
2018-01-14 10:06:14 (16747): Guest Log: 00:00:00.006568 main     Process ID: 732
2018-01-14 10:06:14 (16747): Guest Log: 00:00:00.006569 main     Package type: LINUX_64BITS_GENERIC
2018-01-14 10:06:14 (16747): Guest Log: 00:00:00.007803 main     5.0.16 r105871 started. Verbose level = 0
2018-01-14 10:06:14 (16747): Guest Log: 00:00:00.093586 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2018-01-14 10:06:14 (16747): Guest Log: 00:00:00.093735 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2018-01-14 10:06:14 (16747): Guest Log: Mounting BOINC shared/...
2018-01-14 10:06:14 (16747): Guest Log: -------------------
2018-01-14 10:06:14 (16747): Guest Log: Sun Jan 14 15:06:13 UTC 2018
2018-01-14 10:06:19 (16747): Guest Log: 00:00:05.098255 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2018-01-14 10:06:19 (16747): Guest Log: Sun Jan 14 15:06:18 UTC 2018
2018-01-14 10:06:19 (16747): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2018-01-14 10:06:19 (16747): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2018-01-14 10:06:19 (16747): Guest Log:     inet 127.0.0.1/8 scope host lo
2018-01-14 10:06:19 (16747): Guest Log:        valid_lft forever preferred_lft forever
2018-01-14 10:06:19 (16747): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2018-01-14 10:06:19 (16747): Guest Log:     link/ether 66:f0:54:4f:ec:60 brd ff:ff:ff:ff:ff:ff
2018-01-14 10:06:19 (16747): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2018-01-14 10:06:19 (16747): Guest Log:     link/ether 08:00:27:c8:ba:04 brd ff:ff:ff:ff:ff:ff
2018-01-14 10:06:19 (16747): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2018-01-14 10:06:19 (16747): Guest Log:        valid_lft forever preferred_lft forever
2018-01-14 10:06:19 (16747): Guest Log: -------------------
2018-01-14 10:06:19 (16747): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2018-01-14 10:06:19 (16747): Guest Log: Waiting for Docker daemon to start...
2018-01-14 10:06:22 (16747): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2018-01-14 10:06:22 (16747): Guest Log: Running boinc_app...
2018-01-14 10:06:22 (16747): Guest Log: Importing Docker image from BOINC...
2018-01-14 10:06:22 (16747): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-01-14 10:06:22 (16747): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /
2018-01-14 10:06:22 (16747): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-01-14 10:06:22 (16747): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-01-14 10:06:22 (16747): Guest Log: shared                  916.3G     89.4G    826.8G  10% /root/shared
2018-01-14 10:06:22 (16747): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /var/lib/docker/aufs
2018-01-14 10:06:24 (16747): Guest Log: 00:00:10.102333 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2018-01-14 10:06:41 (16747): Guest Log: doing docker load...
2018-01-14 10:07:05 (16747): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-01-14 10:07:05 (16747): Guest Log: tmpfs                     2.6G    721.5M      1.9G  27% /
2018-01-14 10:07:05 (16747): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-01-14 10:07:05 (16747): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-01-14 10:07:05 (16747): Guest Log: shared                  916.3G     89.2G    827.0G  10% /root/shared
2018-01-14 10:07:05 (16747): Guest Log: tmpfs                     2.6G    721.5M      1.9G  27% /var/lib/docker/aufs
2018-01-14 10:07:05 (16747): Guest Log:               total        used        free      shared  buff/cache   available
2018-01-14 10:07:05 (16747): Guest Log: Mem:           3007          50        2195         721         761        2196
2018-01-14 10:07:05 (16747): Guest Log: Swap:           702           0         702
2018-01-14 10:07:05 (16747): Guest Log: Building apps directory...
2018-01-14 10:07:09 (16747): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2018-01-14 10:07:16 (16747): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077_links.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2018-01-14 10:07:16 (16747): Guest Log: mv /root/shared/appsSource/rappture /root/shared/apps/share64/debian7/environ.d
2018-01-14 10:09:00 (16747): Guest Log: Prerun diagnostics...
2018-01-14 10:09:00 (16747): Guest Log: REPOSITORY                    TAG                 IMAGE ID            CREATED             SIZE
2018-01-14 10:09:00 (16747): Guest Log: nanohub_apps_share64_octave   5                   a3c939485731        5 weeks ago         547 MB
2018-01-14 10:09:00 (16747): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2018-01-14 10:09:01 (16747): Guest Log: 557.4M	/var/lib/docker
2018-01-14 10:09:01 (16747): Guest Log:               total        used        free      shared  buff/cache   available
2018-01-14 10:09:01 (16747): Guest Log: Mem:           3007          52        2188         721         765        2193
2018-01-14 10:09:01 (16747): Guest Log: Swap:           702           0         702
2018-01-14 10:09:01 (16747): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-01-14 10:09:01 (16747): Guest Log: tmpfs                     2.6G    721.5M      1.9G  27% /
2018-01-14 10:09:01 (16747): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-01-14 10:09:01 (16747): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-01-14 10:09:01 (16747): Guest Log: shared                  916.3G     90.1G    826.1G  10% /root/shared
2018-01-14 10:09:01 (16747): Guest Log: tmpfs                     2.6G    721.5M      1.9G  27% /var/lib/docker/aufs
2018-01-14 10:09:01 (16747): Guest Log: Running... 
2018-01-14 10:09:01 (16747): Guest Log: 06424524_002.boinc
2018-01-14 10:09:01 (16747): Guest Log: 06424524_002.sh
2018-01-14 10:09:23 (16747): Guest Log: boinc_app exited (0)
2018-01-14 10:09:23 (16747): Guest Log: Saving results...
2018-01-14 10:09:23 (16747): Guest Log: 06424524_002_output.tar.gz
2018-01-14 10:09:23 (16747): VM Completion File Detected.
2018-01-14 10:09:23 (16747): Powering off VM.
2018-01-14 10:09:24 (16747): Successfully stopped VM.
2018-01-14 10:09:24 (16747): Deregistering VM. (boinc_f4e1ab2ac205067d, slot#4)
2018-01-14 10:09:24 (16747): Removing network bandwidth throttle group from VM.
2018-01-14 10:09:24 (16747): Removing storage controller(s) from VM.
2018-01-14 10:09:24 (16747): Removing VM from VirtualBox.
2018-01-14 10:09:24 (16747): Removing virtual ISO 9660 disk from VirtualBox.
10:09:29 (16747): called boinc_finish(0)

</stderr_txt>
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