Task 153159

Name 06434939_114_1
Workunit 108432
Created 24 Jan 2018, 15:36:33 UTC
Sent 24 Jan 2018, 15:36:40 UTC
Report deadline 24 Jan 2018, 23:36:40 UTC
Received 24 Jan 2018, 18:32:03 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 215
Run time 3 min 42 sec
CPU time 2 min 25 sec
Validate state Valid
Credit 1.26
Device peak FLOPS 2.24 GFLOPS
Application version boinc2docker v1.11 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 1.85 GB
Peak swap size 3.37 GB
Peak disk usage 463.94 MB

Stderr output

<core_client_version>7.4.23</core_client_version>
<![CDATA[
<stderr_txt>
2018-01-24 13:28:08 (10519): vboxwrapper (7.7.26197): starting
2018-01-24 13:28:08 (10519): Feature: Checkpoint interval offset (465 seconds)
2018-01-24 13:28:08 (10519): Detected: VirtualBox VboxManage Interface (Version: 5.1.8)
2018-01-24 13:28:08 (10519): Detected: Minimum checkpoint interval (600.000000 seconds)
2018-01-24 13:28:08 (10519): Create VM. (boinc_6a7269bc1d792cb5, slot#1)
2018-01-24 13:28:08 (10519): Updating drive controller type and model for desired configuration.
2018-01-24 13:28:09 (10519): Setting Memory Size for VM. (3072MB)
2018-01-24 13:28:10 (10519): Setting CPU Count for VM. (1)
2018-01-24 13:28:10 (10519): Setting Chipset Options for VM.
2018-01-24 13:28:10 (10519): Setting Boot Options for VM.
2018-01-24 13:28:10 (10519): Setting Network Configuration for NAT.
2018-01-24 13:28:10 (10519): Enabling VM Network Access.
2018-01-24 13:28:10 (10519): Disabling USB Support for VM.
2018-01-24 13:28:10 (10519): Disabling COM Port Support for VM.
2018-01-24 13:28:10 (10519): Disabling LPT Port Support for VM.
2018-01-24 13:28:10 (10519): Disabling Audio Support for VM.
2018-01-24 13:28:10 (10519): Disabling Clipboard Support for VM.
2018-01-24 13:28:10 (10519): Disabling Drag and Drop Support for VM.
2018-01-24 13:28:10 (10519): Adding storage controller(s) to VM.
2018-01-24 13:28:10 (10519): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2018-01-24 13:28:10 (10519): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2018-01-24 13:28:11 (10519): Enabling shared directory for VM.
2018-01-24 13:28:11 (10519): Starting VM. (boinc_6a7269bc1d792cb5, slot#1)
2018-01-24 13:28:12 (10519): Successfully started VM. (PID = '11002')
2018-01-24 13:28:12 (10519): Reporting VM Process ID to BOINC.
2018-01-24 13:28:13 (10519): Guest Log: BIOS: VirtualBox 5.1.8
2018-01-24 13:28:13 (10519): VM state change detected. (old = 'poweroff', new = 'running')
2018-01-24 13:28:13 (10519): Preference change detected
2018-01-24 13:28:13 (10519): Setting CPU throttle for VM. (75%)
2018-01-24 13:28:13 (10519): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2018-01-24 13:28:15 (10519): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2018-01-24 13:28:15 (10519): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2018-01-24 13:28:15 (10519): Guest Log: BIOS: Boot from Hard Disk 0 failed
2018-01-24 13:28:15 (10519): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2018-01-24 13:28:15 (10519): Guest Log: BIOS: Booting from CD-ROM...
2018-01-24 13:28:17 (10519): Guest Log: BIOS: KBD: unsupported int 16h function 03
2018-01-24 13:28:17 (10519): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2018-01-24 13:28:36 (10519): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2018-01-24 13:28:36 (10519): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2018-01-24 13:28:37 (10519): Guest Log: net.ipv4.ip_forward = 1
2018-01-24 13:28:37 (10519): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2018-01-24 13:28:37 (10519): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-01-24 13:28:37 (10519): Guest Log: sysctl: "cannot stat %s" is an unknown key
2018-01-24 13:28:37 (10519): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-01-24 13:28:37 (10519): Guest Log: Segmentation fault
2018-01-24 13:28:38 (10519): Guest Log: automount ...
2018-01-24 13:28:38 (10519): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2018-01-24 13:28:38 (10519): Guest Log: automount over.
2018-01-24 13:28:38 (10519): Guest Log: Setting hostname to boot2docker Done.
2018-01-24 13:28:38 (10519): Guest Log: Wed Jan 24 13:28:35 UTC 2018 dhcp -------------------------------
2018-01-24 13:28:43 (10519): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2018-01-24 13:28:43 (10519): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6 (1298)
2018-01-24 13:28:43 (10519): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6/event5 (1299)
2018-01-24 13:28:43 (10519): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1300)
2018-01-24 13:28:43 (10519): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1301)
2018-01-24 13:28:43 (10519): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1302)
2018-01-24 13:28:43 (10519): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1303)
2018-01-24 13:28:43 (10519): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1305)
2018-01-24 13:28:43 (10519): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1307)
2018-01-24 13:28:43 (10519): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1308)
2018-01-24 13:28:43 (10519): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1310)
2018-01-24 13:28:43 (10519): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1311)
2018-01-24 13:28:43 (10519): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1312)
2018-01-24 13:28:43 (10519): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1315)
2018-01-24 13:28:43 (10519): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1316)
2018-01-24 13:28:43 (10519): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1317)
2018-01-24 13:28:43 (10519): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1321)
2018-01-24 13:28:44 (10519): Guest Log: Wed Jan 24 13:28:41 UTC 2018 dhcp -------------------------------
2018-01-24 13:28:45 (10519): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2018-01-24 13:28:45 (10519): Guest Log: 00:00:00.000637 main     Log opened 2018-01-24T13:28:42.359915000Z
2018-01-24 13:28:45 (10519): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2018-01-24 13:28:45 (10519): Guest Log: 00:00:00.000637 main     Log opened 2018-01-24T13:28:42.359915000Z
2018-01-24 13:28:45 (10519): Guest Log: 00:00:00.006329 main     OS Product: Linux
2018-01-24 13:28:45 (10519): Guest Log: 00:00:00.006408 main     OS Release: 4.1.19-boot2docker
2018-01-24 13:28:45 (10519): Guest Log: 00:00:00.006484 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-01-24 13:28:45 (10519): Guest Log: 00:00:00.006558 main     Executable: /sbin/VBoxService
2018-01-24 13:28:45 (10519): Guest Log: 00:00:00.006560 main     Process ID: 732
2018-01-24 13:28:45 (10519): Guest Log: 00:00:00.006561 main     Package type: LINUX_64BITS_GENERIC
2018-01-24 13:28:45 (10519): Guest Log: 00:00:00:00.007554 main     5.0.16 r105871 started. Verbose level = 0
2018-01-24 13:28:45 (10519): Guest Log: 00:00.006329 main     OS Product: Linux
2018-01-24 13:28:45 (10519): Guest Log: 00:00:00.006408 main     OS Release: 4.1.19-boot2docker
2018-01-24 13:28:45 (10519): Guest Log: 00:00:00.006484 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-01-24 13:28:45 (10519): Guest Log: 00:00:00.006558 main     Executable: /sbin/VBoxService
2018-01-24 13:28:45 (10519): Guest Log: 00:00:00.006560 main     Process ID: 732
2018-01-24 13:28:45 (10519): Guest Log: 00:00:00.006561 main     Package type: LINUX_64BITS_GENERIC
2018-01-24 13:28:45 (10519): Guest Log: 00:00:00.007554 main     5.0.16 r105871 started. Verbose level = 0
2018-01-24 13:28:45 (10519): Guest Log: 00:00:00.097967 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2018-01-24 13:28:45 (10519): Guest Log: 00:00:00.098163 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2018-01-24 13:28:45 (10519): Guest Log: Mounting BOINC shared/...
2018-01-24 13:28:45 (10519): Guest Log: -------------------
2018-01-24 13:28:45 (10519): Guest Log: Wed Jan 24 18:28:45 UTC 2018
2018-01-24 13:28:50 (10519): Guest Log: 00:00:05.108155 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2018-01-24 13:28:50 (10519): Guest Log: Wed Jan 24 18:28:50 UTC 2018
2018-01-24 13:28:50 (10519): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2018-01-24 13:28:50 (10519): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2018-01-24 13:28:50 (10519): Guest Log:     inet 127.0.0.1/8 scope host lo
2018-01-24 13:28:50 (10519): Guest Log:        valid_lft forever preferred_lft forever
2018-01-24 13:28:50 (10519): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2018-01-24 13:28:50 (10519): Guest Log:     link/ether e2:91:16:6f:b6:67 brd ff:ff:ff:ff:ff:ff
2018-01-24 13:28:50 (10519): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2018-01-24 13:28:50 (10519): Guest Log:     link/ether 08:00:27:61:b8:16 brd ff:ff:ff:ff:ff:ff
2018-01-24 13:28:50 (10519): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2018-01-24 13:28:50 (10519): Guest Log:        valid_lft forever preferred_lft forever
2018-01-24 13:28:50 (10519): Guest Log: -------------------
2018-01-24 13:28:50 (10519): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2018-01-24 13:28:50 (10519): Guest Log: Waiting for Docker daemon to start...
2018-01-24 13:28:53 (10519): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2018-01-24 13:28:53 (10519): Guest Log: Running boinc_app...
2018-01-24 13:28:53 (10519): Guest Log: Importing Docker image from BOINC...
2018-01-24 13:28:53 (10519): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-01-24 13:28:53 (10519): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /
2018-01-24 13:28:53 (10519): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-01-24 13:28:53 (10519): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-01-24 13:28:53 (10519): Guest Log: shared                  886.1G     88.6G    797.4G  10% /root/shared
2018-01-24 13:28:53 (10519): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /var/lib/docker/aufs
2018-01-24 13:28:55 (10519): Guest Log: 00:00:10.109757 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2018-01-24 13:29:10 (10519): Guest Log: doing docker load...
2018-01-24 13:29:33 (10519): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-01-24 13:29:33 (10519): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2018-01-24 13:29:33 (10519): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-01-24 13:29:33 (10519): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-01-24 13:29:33 (10519): Guest Log: shared                  886.1G     88.5G    797.6G  10% /root/shared
2018-01-24 13:29:33 (10519): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /var/lib/docker/aufs
2018-01-24 13:29:33 (10519): Guest Log:               total        used        free      shared  buff/cache   available
2018-01-24 13:29:33 (10519): Guest Log: Mem:           3007          51        2253         663         701        2254
2018-01-24 13:29:33 (10519): Guest Log: Swap:           702           0         702
2018-01-24 13:29:33 (10519): Guest Log: Building apps directory...
2018-01-24 13:29:37 (10519): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2018-01-24 13:29:46 (10519): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077_links.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2018-01-24 13:29:46 (10519): Guest Log: mv /root/shared/appsSource/rappture /root/shared/apps/share64/debian7/environ.d
2018-01-24 13:31:16 (10519): Guest Log: Prerun diagnostics...
2018-01-24 13:31:16 (10519): Guest Log: REPOSITORY                    TAG                 IMAGE ID            CREATED             SIZE
2018-01-24 13:31:16 (10519): Guest Log: nanohub_apps_share64_matlab   4                   32c863520615        7 weeks ago         488.2 MB
2018-01-24 13:31:17 (10519): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2018-01-24 13:31:17 (10519): Guest Log: 499.0M	/var/lib/docker
2018-01-24 13:31:17 (10519): Guest Log:               total        used        free      shared  buff/cache   available
2018-01-24 13:31:17 (10519): Guest Log: Mem:           3007          54        2240         663         713        2249
2018-01-24 13:31:17 (10519): Guest Log: Swap:           702           0         702
2018-01-24 13:31:17 (10519): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-01-24 13:31:17 (10519): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2018-01-24 13:31:17 (10519): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-01-24 13:31:17 (10519): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-01-24 13:31:17 (10519): Guest Log: shared                  886.1G     89.1G    797.0G  10% /root/shared
2018-01-24 13:31:17 (10519): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /var/lib/docker/aufs
2018-01-24 13:31:17 (10519): Guest Log: Running... 
2018-01-24 13:31:18 (10519): Guest Log: 06434939_114.boinc
2018-01-24 13:31:18 (10519): Guest Log: 06434939_114.sh
2018-01-24 13:31:38 (10519): Guest Log: boinc_app exited (0)
2018-01-24 13:31:38 (10519): Guest Log: Saving results...
2018-01-24 13:31:38 (10519): Guest Log: 06434939_114_output.tar.gz
2018-01-24 13:31:38 (10519): VM Completion File Detected.
2018-01-24 13:31:38 (10519): Powering off VM.
2018-01-24 13:31:43 (10519): Successfully stopped VM.
2018-01-24 13:31:43 (10519): Deregistering VM. (boinc_6a7269bc1d792cb5, slot#1)
2018-01-24 13:31:43 (10519): Removing network bandwidth throttle group from VM.
2018-01-24 13:31:43 (10519): Removing storage controller(s) from VM.
2018-01-24 13:31:43 (10519): Removing VM from VirtualBox.
2018-01-24 13:31:43 (10519): Removing virtual ISO 9660 disk from VirtualBox.
13:31:48 (10519): called boinc_finish(0)

</stderr_txt>
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