Task 212853
| Name | 06477147_38_0 |
| Workunit | 142157 |
| Created | 18 Feb 2018, 21:02:52 UTC |
| Sent | 18 Feb 2018, 21:03:25 UTC |
| Report deadline | 19 Feb 2018, 5:03:25 UTC |
| Received | 18 Feb 2018, 23:15:42 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 339 |
| Run time | 26 min 11 sec |
| CPU time | 5 min 53 sec |
| Validate state | Valid |
| Credit | 16.94 |
| Device peak FLOPS | 3.02 GFLOPS |
| Application version | boinc2docker v1.11 (vbox64_mt) x86_64-pc-linux-gnu |
| Peak working set size | 110.19 MB |
| Peak swap size | 3.87 GB |
| Peak disk usage | 2.87 GB |
Stderr output
<core_client_version>7.6.33</core_client_version>
<![CDATA[
<stderr_txt>
2018-02-18 17:32:38 (39770): vboxwrapper (7.7.26197): starting
2018-02-18 17:32:38 (39770): Feature: Checkpoint interval offset (145 seconds)
2018-02-18 17:32:38 (39770): Detected: VirtualBox VboxManage Interface (Version: 5.0.2)
2018-02-18 17:32:39 (39770): Detected: Minimum checkpoint interval (600.000000 seconds)
2018-02-18 17:32:39 (39770): Create VM. (boinc_c276a458efcca088, slot#21)
2018-02-18 17:32:39 (39770): Updating drive controller type and model for desired configuration.
2018-02-18 17:32:42 (39770): Setting Memory Size for VM. (3072MB)
2018-02-18 17:32:42 (39770): Setting CPU Count for VM. (1)
2018-02-18 17:32:42 (39770): Setting Chipset Options for VM.
2018-02-18 17:32:43 (39770): Setting Boot Options for VM.
2018-02-18 17:32:43 (39770): Setting Network Configuration for NAT.
2018-02-18 17:32:43 (39770): Enabling VM Network Access.
2018-02-18 17:32:43 (39770): Disabling USB Support for VM.
2018-02-18 17:32:44 (39770): Disabling COM Port Support for VM.
2018-02-18 17:32:44 (39770): Disabling LPT Port Support for VM.
2018-02-18 17:32:44 (39770): Disabling Audio Support for VM.
2018-02-18 17:32:45 (39770): Disabling Clipboard Support for VM.
2018-02-18 17:32:45 (39770): Disabling Drag and Drop Support for VM.
2018-02-18 17:32:46 (39770): Adding storage controller(s) to VM.
2018-02-18 17:32:46 (39770): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2018-02-18 17:32:47 (39770): Adding VirtualBox Guest Additions to VM.
2018-02-18 17:32:47 (39770): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2018-02-18 17:32:48 (39770): Enabling shared directory for VM.
2018-02-18 17:32:49 (39770): Starting VM. (boinc_c276a458efcca088, slot#21)
2018-02-18 17:32:54 (39770): Successfully started VM. (PID = '41552')
2018-02-18 17:32:54 (39770): Reporting VM Process ID to BOINC.
2018-02-18 17:32:56 (39770): Guest Log: BIOS: VirtualBox 5.0.2
2018-02-18 17:32:56 (39770): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2018-02-18 17:32:56 (39770): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2018-02-18 17:32:56 (39770): Guest Log: BIOS: Boot from Hard Disk 0 failed
2018-02-18 17:32:56 (39770): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2018-02-18 17:32:56 (39770): Guest Log: BIOS: Booting from CD-ROM...
2018-02-18 17:32:57 (39770): VM state change detected. (old = 'poweroff', new = 'running')
2018-02-18 17:32:59 (39770): Preference change detected
2018-02-18 17:32:59 (39770): Setting CPU throttle for VM. (100%)
2018-02-18 17:32:59 (39770): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 600 seconds))
2018-02-18 17:33:02 (39770): Guest Log: BIOS: KBD: unsupported int 16h function 03
2018-02-18 17:33:02 (39770): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000
2018-02-18 17:33:18 (39770): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2018-02-18 17:33:18 (39770): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2018-02-18 17:33:18 (39770): Guest Log: net.ipv4.ip_forward = 1
2018-02-18 17:33:18 (39770): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2018-02-18 17:33:18 (39770): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-02-18 17:33:18 (39770): Guest Log: sysctl: "cannot stat %s" is an unknown key
2018-02-18 17:33:18 (39770): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-02-18 17:33:18 (39770): Guest Log: Segmentation fault
2018-02-18 17:33:18 (39770): Guest Log: automount ...
2018-02-18 17:33:18 (39770): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2018-02-18 17:33:18 (39770): Guest Log: automount over.
2018-02-18 17:33:18 (39770): Guest Log: [1;32mSetting hostname to [1;35mboot2docker[0;39m [1;32mDone.[0;39m
2018-02-18 17:33:18 (39770): Guest Log: Sun Feb 18 17:33:14 UTC 2018 dhcp -------------------------------
2018-02-18 17:33:22 (39770): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1071)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00 (1296)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXCPU:00 (1297)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00 (1298)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0 (1299)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0/event0 (1300)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00 (1301)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1 (1302)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1/event1 (1303)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00 (1304)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00 (1305)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00 (1306)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00/power_supply/AC (1307)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00 (1308)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/device:01 (1309)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6 (1310)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6/event5 (1311)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1312)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1313)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1314)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1315)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1316)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00 (1317)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1318)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1319)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1320)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1321)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1322)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1323)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0400:00 (1324)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1325)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1326)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1327)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:02 (1328)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1329)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1330)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1331)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1332)
2018-02-18 17:33:22 (39770): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:01 (1333)
2018-02-18 17:33:23 (39770): Guest Log: Sun Feb 18 17:33:20 UTC 2018 dhcp -------------------------------
2018-02-18 17:33:23 (39770): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log
2018-02-18 17:33:23 (39770): Guest Log: 00:00:00.000144 main Log opened 2018-02-18T17:33:20.444315000Z
2018-02-18 17:33:23 (39770): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log
2018-02-18 17:33:23 (39770): Guest Log: 00:00:00.000144 main Log opened 2018-02-18T17:33:20.444315000Z
2018-02-18 17:33:23 (39770): Guest Log: 00:00:00.004445 main OS Product: Linux
2018-02-18 17:33:23 (39770): Guest Log: 00:00:00.004513 main OS Release: 4.1.19-boot2docker
2018-02-18 17:33:23 (39770): Guest Log: 00:00:00.004560 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-02-18 17:33:23 (39770): Guest Log: 00:00:00.004608 main Executable: /sbin/VBoxService
2018-02-18 17:33:23 (39770): Guest Log: 00:00:00.004611 main Process ID: 850
2018-02-18 17:33:23 (39770): Guest Log: 00:00:00.004612 main Package type: LINUX_64BITS_GENERIC
2018-02-18 17:33:23 (39770): Guest Log: 00:00:00.004445 main OS Product: Linux
2018-02-18 17:33:23 (39770): Guest Log: 00:00:00.004513 main OS Release: 4.1.19-boot2docker
2018-02-18 17:33:23 (39770): Guest Log: 00:00:00.004560 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-02-18 17:33:23 (39770): Guest Log: 00:00:00.004608 main Executable: /sbin/VBoxService
2018-02-18 17:33:23 (39770): Guest Log: 00:00:00.004611 main Process ID: 850
2018-02-18 17:33:23 (39770): Guest Log: 00:00:00.004612 main Package type: LINUX_64BITS_GENERIC
2018-02-18 17:33:23 (39770): Guest Log: 00:00:00.054349 main 5.0.16 r105871 started. Verbose level = 0
2018-02-18 17:33:23 (39770): Guest Log: 00:00:00.054349 main 5.0.16 r105871 started. Verbose level = 0
2018-02-18 17:33:24 (39770): Guest Log: Mounting BOINC shared/...
2018-02-18 17:33:24 (39770): Guest Log: -------------------
2018-02-18 17:33:24 (39770): Guest Log: Sun Feb 18 22:33:23 UTC 2018
2018-02-18 17:33:24 (39770): Guest Log: 00:00:00.175884 vminfo rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2018-02-18 17:33:24 (39770): Guest Log: 00:00:00.175966 vminfo Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2018-02-18 17:33:29 (39770): Guest Log: Sun Feb 18 22:33:38 UTC 2018
2018-02-18 17:33:29 (39770): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default
2018-02-18 17:33:29 (39770): Guest Log: link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2018-02-18 17:33:29 (39770): Guest Log: inet 127.0.0.1/8 scope host lo
2018-02-18 17:33:29 (39770): Guest Log: valid_lft forever preferred_lft forever
2018-02-18 17:33:29 (39770): Guest Log: inet6 ::1/128 scope host
2018-02-18 17:33:29 (39770): Guest Log: valid_lft forever preferred_lft forever
2018-02-18 17:33:29 (39770): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default
2018-02-18 17:33:29 (39770): Guest Log: link/ether aa:c8:d7:9f:bd:0f brd ff:ff:ff:ff:ff:ff
2018-02-18 17:33:29 (39770): Guest Log: 3: eth0: <BROADCAST,M00:00:05.199301 vminfo Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2018-02-18 17:33:29 (39770): Guest Log: ULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2018-02-18 17:33:29 (39770): Guest Log: link/ether 08:00:27:80:7e:fe brd ff:ff:ff:ff:ff:ff
2018-02-18 17:33:29 (39770): Guest Log: inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2018-02-18 17:33:29 (39770): Guest Log: valid_lft forever preferred_lft forever
2018-02-18 17:33:29 (39770): Guest Log: inet6 fe80::a00:27ff:fe80:7efe/64 scope link
2018-02-18 17:33:29 (39770): Guest Log: valid_lft forever preferred_lft forever
2018-02-18 17:33:29 (39770): Guest Log: -------------------
2018-02-18 17:33:29 (39770): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2018-02-18 17:33:29 (39770): Guest Log: Waiting for Docker daemon to start...
2018-02-18 17:33:30 (39770): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE
2018-02-18 17:33:30 (39770): Guest Log: Running boinc_app...
2018-02-18 17:33:30 (39770): Guest Log: Importing Docker image from BOINC...
2018-02-18 17:33:30 (39770): Guest Log: Filesystem Size Used Available Use% Mounted on
2018-02-18 17:33:30 (39770): Guest Log: tmpfs 2.6G 164.2M 2.5G 6% /
2018-02-18 17:33:30 (39770): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2018-02-18 17:33:30 (39770): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2018-02-18 17:33:30 (39770): Guest Log: shared 432.4G 69.2G 363.3G 16% /root/shared
2018-02-18 17:33:30 (39770): Guest Log: tmpfs 2.6G 164.2M 2.5G 6% /var/lib/docker/aufs
2018-02-18 17:33:34 (39770): Guest Log: 00:00:10.362804 vminfo Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2018-02-18 17:34:05 (39770): Guest Log: doing docker load...
2018-02-18 17:34:22 (39770): Guest Log: Filesystem Size Used Available Use% Mounted on
2018-02-18 17:34:22 (39770): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /
2018-02-18 17:34:22 (39770): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2018-02-18 17:34:22 (39770): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2018-02-18 17:34:22 (39770): Guest Log: shared 432.4G 68.9G 363.5G 16% /root/shared
2018-02-18 17:34:22 (39770): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /var/lib/docker/aufs
2018-02-18 17:34:22 (39770): Guest Log: total used free shared buff/cache available
2018-02-18 17:34:22 (39770): Guest Log: Mem: 3007 52 2253 663 701 2253
2018-02-18 17:34:22 (39770): Guest Log: Swap: 700 0 700
2018-02-18 17:34:22 (39770): Guest Log: Building apps directory...
2018-02-18 17:34:29 (39770): Guest Log: tar: ./r15/bin/main_mcr/.META/manifest.xml: time stamp 2035-10-29 06:32:22 is 558259063.921704829 s in the future
2018-02-18 17:34:38 (39770): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2018-02-18 17:35:38 (39770): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077_links.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2018-02-18 17:35:40 (39770): Guest Log: mv /root/shared/appsSource/rappture /root/shared/apps/share64/debian7/environ.d
2018-02-18 17:57:23 (39770): Guest Log: Prerun diagnostics...
2018-02-18 17:57:23 (39770): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE
2018-02-18 17:57:23 (39770): Guest Log: nanohub_apps_share64_matlab 4 32c863520615 10 weeks ago 488.2 MB
2018-02-18 17:57:23 (39770): Guest Log: CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
2018-02-18 17:57:23 (39770): Guest Log: 499.0M /var/lib/docker
2018-02-18 17:57:23 (39770): Guest Log: total used free shared buff/cache available
2018-02-18 17:57:23 (39770): Guest Log: Mem: 3007 36 2232 663 737 2262
2018-02-18 17:57:23 (39770): Guest Log: Swap: 700 0 700
2018-02-18 17:57:23 (39770): Guest Log: Filesystem Size Used Available Use% Mounted on
2018-02-18 17:57:23 (39770): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /
2018-02-18 17:57:23 (39770): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2018-02-18 17:57:23 (39770): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2018-02-18 17:57:23 (39770): Guest Log: shared 432.4G 79.4G 353.0G 18% /root/shared
2018-02-18 17:57:23 (39770): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /var/lib/docker/aufs
2018-02-18 17:57:23 (39770): Guest Log: Running...
2018-02-18 17:57:23 (39770): Guest Log: 06477147_38.boinc
2018-02-18 17:57:24 (39770): Guest Log: 06477147_38.sh
2018-02-18 17:58:39 (39770): Guest Log: boinc_app exited (0)
2018-02-18 17:58:39 (39770): Guest Log: Saving results...
2018-02-18 17:58:39 (39770): Guest Log: 06477147_38_output.tar.gz
2018-02-18 17:58:39 (39770): VM Completion File Detected.
2018-02-18 17:58:39 (39770): Powering off VM.
2018-02-18 17:58:40 (39770): Successfully stopped VM.
2018-02-18 17:58:40 (39770): Deregistering VM. (boinc_c276a458efcca088, slot#21)
2018-02-18 17:58:40 (39770): Removing network bandwidth throttle group from VM.
2018-02-18 17:58:41 (39770): Removing storage controller(s) from VM.
2018-02-18 17:58:41 (39770): Removing VM from VirtualBox.
2018-02-18 17:58:41 (39770): Removing virtual ISO 9660 disk from VirtualBox.
17:58:46 (39770): called boinc_finish(0)
</stderr_txt>
]]>
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