Task 212874

Name 06477147_59_0
Workunit 142178
Created 18 Feb 2018, 21:02:52 UTC
Sent 18 Feb 2018, 21:03:25 UTC
Report deadline 19 Feb 2018, 5:03:25 UTC
Received 18 Feb 2018, 23:15:42 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 339
Run time 25 min 41 sec
CPU time 5 min 28 sec
Validate state Valid
Credit 15.18
Device peak FLOPS 3.02 GFLOPS
Application version boinc2docker v1.11 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 107.94 MB
Peak swap size 3.80 GB
Peak disk usage 2.91 GB

Stderr output

<core_client_version>7.6.33</core_client_version>
<![CDATA[
<stderr_txt>
2018-02-18 17:32:35 (39282): vboxwrapper (7.7.26197): starting
2018-02-18 17:32:35 (39282): Feature: Checkpoint interval offset (513 seconds)
2018-02-18 17:32:35 (39282): Detected: VirtualBox VboxManage Interface (Version: 5.0.2)
2018-02-18 17:32:36 (39282): Detected: Minimum checkpoint interval (600.000000 seconds)
2018-02-18 17:32:36 (39282): Create VM. (boinc_b6524869c990f124, slot#7)
2018-02-18 17:32:36 (39282): Updating drive controller type and model for desired configuration.
2018-02-18 17:32:36 (39282): Setting Memory Size for VM. (3072MB)
2018-02-18 17:32:37 (39282): Setting CPU Count for VM. (1)
2018-02-18 17:32:37 (39282): Setting Chipset Options for VM.
2018-02-18 17:32:37 (39282): Setting Boot Options for VM.
2018-02-18 17:32:38 (39282): Setting Network Configuration for NAT.
2018-02-18 17:32:38 (39282): Enabling VM Network Access.
2018-02-18 17:32:38 (39282): Disabling USB Support for VM.
2018-02-18 17:32:39 (39282): Disabling COM Port Support for VM.
2018-02-18 17:32:39 (39282): Disabling LPT Port Support for VM.
2018-02-18 17:32:39 (39282): Disabling Audio Support for VM.
2018-02-18 17:32:41 (39282): Disabling Clipboard Support for VM.
2018-02-18 17:32:42 (39282): Disabling Drag and Drop Support for VM.
2018-02-18 17:32:42 (39282): Adding storage controller(s) to VM.
2018-02-18 17:32:42 (39282): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2018-02-18 17:32:43 (39282): Adding VirtualBox Guest Additions to VM.
2018-02-18 17:32:43 (39282): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2018-02-18 17:32:43 (39282): Enabling shared directory for VM.
2018-02-18 17:32:45 (39282): Starting VM. (boinc_b6524869c990f124, slot#7)
2018-02-18 17:32:48 (39282): Successfully started VM. (PID = '41157')
2018-02-18 17:32:48 (39282): Reporting VM Process ID to BOINC.
2018-02-18 17:32:50 (39282): Guest Log: BIOS: VirtualBox 5.0.2
2018-02-18 17:32:50 (39282): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2018-02-18 17:32:50 (39282): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2018-02-18 17:32:50 (39282): Guest Log: BIOS: Boot from Hard Disk 0 failed
2018-02-18 17:32:50 (39282): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2018-02-18 17:32:50 (39282): Guest Log: BIOS: Booting from CD-ROM...
2018-02-18 17:32:53 (39282): VM state change detected. (old = 'poweroff', new = 'running')
2018-02-18 17:32:53 (39282): Guest Log: BIOS: KBD: unsupported int 16h function 03
2018-02-18 17:32:53 (39282): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2018-02-18 17:32:56 (39282): Preference change detected
2018-02-18 17:32:56 (39282): Setting CPU throttle for VM. (100%)
2018-02-18 17:32:56 (39282): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 600 seconds))
2018-02-18 17:33:08 (39282): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2018-02-18 17:33:08 (39282): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2018-02-18 17:33:10 (39282): Guest Log: net.ipv4.ip_forward = 1
2018-02-18 17:33:10 (39282): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2018-02-18 17:33:10 (39282): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-02-18 17:33:10 (39282): Guest Log: sysctl: "cannot stat %s" is an unknown key
2018-02-18 17:33:10 (39282): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-02-18 17:33:10 (39282): Guest Log: Segmentation fault
2018-02-18 17:33:10 (39282): Guest Log: automount ...
2018-02-18 17:33:12 (39282): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2018-02-18 17:33:14 (39282): Guest Log: automount over.
2018-02-18 17:33:14 (39282): Guest Log: Setting hostname to boot2docker Done.
2018-02-18 17:33:14 (39282): Guest Log: Sun Feb 18 17:33:11 UTC 2018 dhcp -------------------------------
2018-02-18 17:33:18 (39282): Guest Log: Sun Feb 18 17:33:16 UTC 2018 dhcp -------------------------------
2018-02-18 17:33:20 (39282): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2018-02-18 17:33:20 (39282): Guest Log: 00:00:00.000144 main     Log opened 2018-02-18T17:33:16.379562000Z
2018-02-18 17:33:20 (39282): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2018-02-18 17:33:20 (39282): Guest Log: 00:00:00.000144 main     Log opened 2018-02-18T17:33:16.379562000Z
2018-02-18 17:33:20 (39282): Guest Log: 00:00:00.004514 main     OS Product: Linux
2018-02-18 17:33:20 (39282): Guest Log: 00:00:00.004571 main     OS Release: 4.1.19-boot2docker
2018-02-18 17:33:20 (39282): Guest Log: 00:00:00.004611 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-02-18 17:33:20 (39282): Guest Log: 00:00:00.004649 main     Executable: /sbin/VBoxService
2018-02-18 17:33:20 (39282): Guest Log: 00:00:00.004651 main     Process ID: 858
2018-02-18 17:33:20 (39282): Guest Log: 00:00:00.004652 main     Package type: LINUX_64BITS_GENERIC
2018-02-18 17:33:20 (39282): Guest Log: 00:00:00.004514 main     OS Product: Linux
2018-02-18 17:33:20 (39282): Guest Log: 00:00:00.004571 main     OS Release: 4.1.19-boot2docker
2018-02-18 17:33:20 (39282): Guest Log: 00:00:00.004611 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-02-18 17:33:20 (39282): Guest Log: 00:00:00.004649 main     Executable: /sbin/VBoxService
2018-02-18 17:33:20 (39282): Guest Log: 00:00:00.004651 main     Process ID: 858
2018-02-18 17:33:20 (39282): Guest Log: 00:00:00.004652 main     Package type: LINUX_64BITS_GENERIC
2018-02-18 17:33:20 (39282): Guest Log: 00:00:00.061651 main     5.0.16 r105871 started. Verbose level = 0
2018-02-18 17:33:20 (39282): Guest Log: 00:00:00.061651 main     5.0.16 r105871 started. Verbose level = 0
2018-02-18 17:33:20 (39282): Guest Log: 00:00:00.143675 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2018-02-18 17:33:20 (39282): Guest Log: 00:00:00.143745 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2018-02-18 17:33:20 (39282): Guest Log: Mounting BOINC shared/...
2018-02-18 17:33:20 (39282): Guest Log: -------------------
2018-02-18 17:33:20 (39282): Guest Log: Sun Feb 18 22:33:19 UTC 2018
2018-02-18 17:33:25 (39282): Guest Log: 00:00:05.183028 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2018-02-18 17:33:25 (39282): Guest Log: Sun Feb 18 22:33:33 UTC 2018
2018-02-18 17:33:25 (39282): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2018-02-18 17:33:25 (39282): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2018-02-18 17:33:25 (39282): Guest Log:     inet 127.0.0.1/8 scope host lo
2018-02-18 17:33:25 (39282): Guest Log:        valid_lft forever preferred_lft forever
2018-02-18 17:33:25 (39282): Guest Log:     inet6 ::1/128 scope host 
2018-02-18 17:33:25 (39282): Guest Log:        valid_lft forever preferred_lft forever
2018-02-18 17:33:25 (39282): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2018-02-18 17:33:25 (39282): Guest Log:     link/ether 7e:87:10:59:17:d1 brd ff:ff:ff:ff:ff:ff
2018-02-18 17:33:25 (39282): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2018-02-18 17:33:25 (39282): Guest Log:     link/ether 08:00:27:41:92:65 brd ff:ff:ff:ff:ff:ff
2018-02-18 17:33:25 (39282): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2018-02-18 17:33:25 (39282): Guest Log:        valid_lft forever preferred_lft forever
2018-02-18 17:33:25 (39282): Guest Log:     inet6 fe80::a00:27ff:fe41:9265/64 scope link 
2018-02-18 17:33:25 (39282): Guest Log:        valid_lft forever preferred_lft forever
2018-02-18 17:33:25 (39282): Guest Log: -------------------
2018-02-18 17:33:25 (39282): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2018-02-18 17:33:25 (39282): Guest Log: Waiting for Docker daemon to start...
2018-02-18 17:33:25 (39282): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2018-02-18 17:33:25 (39282): Guest Log: Running boinc_app...
2018-02-18 17:33:25 (39282): Guest Log: Importing Docker image from BOINC...
2018-02-18 17:33:25 (39282): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-02-18 17:33:25 (39282): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /
2018-02-18 17:33:25 (39282): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-02-18 17:33:25 (39282): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-02-18 17:33:25 (39282): Guest Log: shared                  432.4G     69.1G    363.3G  16% /root/shared
2018-02-18 17:33:25 (39282): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /var/lib/docker/aufs
2018-02-18 17:33:29 (39282): Guest Log: 00:00:10.354193 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2018-02-18 17:33:52 (39282): Guest Log: doing docker load...
2018-02-18 17:34:09 (39282): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-02-18 17:34:09 (39282): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2018-02-18 17:34:09 (39282): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-02-18 17:34:09 (39282): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-02-18 17:34:09 (39282): Guest Log: shared                  432.4G     68.8G    363.7G  16% /root/shared
2018-02-18 17:34:09 (39282): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /var/lib/docker/aufs
2018-02-18 17:34:09 (39282): Guest Log:               total        used        free      shared  buff/cache   available
2018-02-18 17:34:09 (39282): Guest Log: Mem:           3007          48        2257         663         701        2258
2018-02-18 17:34:09 (39282): Guest Log: Swap:           700           0         700
2018-02-18 17:34:09 (39282): Guest Log: Building apps directory...
2018-02-18 17:34:14 (39282): Guest Log: tar: ./r15/bin/main_mcr/.META/manifest.xml: time stamp 2035-10-29 06:32:22 is 558259078.041467933 s in the future
2018-02-18 17:34:25 (39282): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2018-02-18 17:35:19 (39282): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077_links.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2018-02-18 17:35:19 (39282): Guest Log: mv /root/shared/appsSource/rappture /root/shared/apps/share64/debian7/environ.d
2018-02-18 17:57:21 (39282): Guest Log: Prerun diagnostics...
2018-02-18 17:57:21 (39282): Guest Log: REPOSITORY                    TAG                 IMAGE ID            CREATED             SIZE
2018-02-18 17:57:21 (39282): Guest Log: nanohub_apps_share64_matlab   4                   32c863520615        10 weeks ago        488.2 MB
2018-02-18 17:57:21 (39282): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2018-02-18 17:57:21 (39282): Guest Log: 499.0M	/var/lib/docker
2018-02-18 17:57:21 (39282): Guest Log:               total        used        free      shared  buff/cache   available
2018-02-18 17:57:21 (39282): Guest Log: Mem:           3007          35        2234         663         737        2264
2018-02-18 17:57:21 (39282): Guest Log: Swap:           700           0         700
2018-02-18 17:57:21 (39282): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-02-18 17:57:21 (39282): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2018-02-18 17:57:21 (39282): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-02-18 17:57:21 (39282): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-02-18 17:57:21 (39282): Guest Log: shared                  432.4G     80.4G    352.0G  19% /root/shared
2018-02-18 17:57:21 (39282): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /var/lib/docker/aufs
2018-02-18 17:57:21 (39282): Guest Log: Running... 
2018-02-18 17:57:22 (39282): Guest Log: 06477147_59.boinc
2018-02-18 17:57:22 (39282): Guest Log: 06477147_59.sh
2018-02-18 17:58:08 (39282): Guest Log: boinc_app exited (0)
2018-02-18 17:58:08 (39282): Guest Log: Saving results...
2018-02-18 17:58:08 (39282): Guest Log: 06477147_59_output.tar.gz
2018-02-18 17:58:08 (39282): VM Completion File Detected.
2018-02-18 17:58:08 (39282): Powering off VM.
2018-02-18 17:58:09 (39282): Successfully stopped VM.
2018-02-18 17:58:09 (39282): Deregistering VM. (boinc_b6524869c990f124, slot#7)
2018-02-18 17:58:09 (39282): Removing network bandwidth throttle group from VM.
2018-02-18 17:58:09 (39282): Removing storage controller(s) from VM.
2018-02-18 17:58:09 (39282): Removing VM from VirtualBox.
2018-02-18 17:58:09 (39282): Removing virtual ISO 9660 disk from VirtualBox.
17:58:15 (39282): called boinc_finish(0)

</stderr_txt>
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