Task 229704

Name 06495004_13_2
Workunit 149638
Created 28 Feb 2018, 0:40:02 UTC
Sent 28 Feb 2018, 0:40:16 UTC
Report deadline 28 Feb 2018, 8:40:16 UTC
Received 28 Feb 2018, 8:42:06 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 361
Run time 2 min 16 sec
CPU time 1 min 3 sec
Validate state Valid
Credit 1.61
Device peak FLOPS 3.40 GFLOPS
Application version boinc2docker v1.11 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 110.36 MB
Peak swap size 3.85 GB
Peak disk usage 264.64 MB

Stderr output

<core_client_version>7.6.31</core_client_version>
<![CDATA[
<stderr_txt>
2018-02-28 09:39:27 (17345): vboxwrapper (7.7.26197): starting
2018-02-28 09:39:27 (17345): Feature: Checkpoint interval offset (45 seconds)
2018-02-28 09:39:27 (17345): Detected: VirtualBox VboxManage Interface (Version: 5.2.6)
2018-02-28 09:39:28 (17345): Detected: Minimum checkpoint interval (600.000000 seconds)
2018-02-28 09:39:28 (17345): Create VM. (boinc_5c795dc4a9b9a0a8, slot#1)
2018-02-28 09:39:28 (17345): Updating drive controller type and model for desired configuration.
2018-02-28 09:39:28 (17345): Setting Memory Size for VM. (3072MB)
2018-02-28 09:39:28 (17345): Setting CPU Count for VM. (1)
2018-02-28 09:39:29 (17345): Setting Chipset Options for VM.
2018-02-28 09:39:29 (17345): Setting Boot Options for VM.
2018-02-28 09:39:29 (17345): Setting Network Configuration for NAT.
2018-02-28 09:39:29 (17345): Enabling VM Network Access.
2018-02-28 09:39:29 (17345): Disabling USB Support for VM.
2018-02-28 09:39:30 (17345): Disabling COM Port Support for VM.
2018-02-28 09:39:30 (17345): Disabling LPT Port Support for VM.
2018-02-28 09:39:30 (17345): Disabling Audio Support for VM.
2018-02-28 09:39:31 (17345): Disabling Clipboard Support for VM.
2018-02-28 09:39:31 (17345): Disabling Drag and Drop Support for VM.
2018-02-28 09:39:31 (17345): Adding storage controller(s) to VM.
2018-02-28 09:39:31 (17345): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2018-02-28 09:39:32 (17345): Adding VirtualBox Guest Additions to VM.
2018-02-28 09:39:32 (17345): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2018-02-28 09:39:32 (17345): Enabling shared directory for VM.
2018-02-28 09:39:33 (17345): Starting VM. (boinc_5c795dc4a9b9a0a8, slot#1)
2018-02-28 09:39:35 (17345): Successfully started VM. (PID = '18012')
2018-02-28 09:39:35 (17345): Reporting VM Process ID to BOINC.
2018-02-28 09:39:35 (17345): Guest Log: BIOS: VirtualBox 5.2.6
2018-02-28 09:39:35 (17345): Guest Log: CPUID EDX: 0x078bfbff
2018-02-28 09:39:35 (17345): VM state change detected. (old = 'poweroff', new = 'running')
2018-02-28 09:39:35 (17345): Preference change detected
2018-02-28 09:39:35 (17345): Setting CPU throttle for VM. (100%)
2018-02-28 09:39:36 (17345): Setting checkpoint interval to 6000 seconds. (Higher value of (Preference: 6000 seconds) or (Vbox_job.xml: 600 seconds))
2018-02-28 09:39:36 (17345): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2018-02-28 09:39:36 (17345): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2018-02-28 09:39:36 (17345): Guest Log: BIOS: Boot from Hard Disk 0 failed
2018-02-28 09:39:36 (17345): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2018-02-28 09:39:36 (17345): Guest Log: BIOS: Booting from CD-ROM...
2018-02-28 09:39:42 (17345): Guest Log: BIOS: KBD: unsupported int 16h function 03
2018-02-28 09:39:42 (17345): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2018-02-28 09:39:57 (17345): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2018-02-28 09:39:57 (17345): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2018-02-28 09:39:57 (17345): Guest Log: net.ipv4.ip_forward = 1
2018-02-28 09:39:57 (17345): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2018-02-28 09:39:57 (17345): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-02-28 09:39:57 (17345): Guest Log: sysctl: "cannot stat %s" is an unknown key
2018-02-28 09:39:57 (17345): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-02-28 09:39:57 (17345): Guest Log: Segmentation fault
2018-02-28 09:39:58 (17345): Guest Log: automount ...
2018-02-28 09:39:59 (17345): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2018-02-28 09:39:59 (17345): Guest Log: automount over.
2018-02-28 09:39:59 (17345): Guest Log: Setting hostname to boot2docker Done.
2018-02-28 09:39:59 (17345): Guest Log: Wed Feb 28 09:39:57 UTC 2018 dhcp -------------------------------
2018-02-28 09:40:04 (17345): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2018-02-28 09:40:04 (17345): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1346)
2018-02-28 09:40:06 (17345): Guest Log: Wed Feb 28 09:40:03 UTC 2018 dhcp -------------------------------
2018-02-28 09:40:06 (17345): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2018-02-28 09:40:06 (17345): Guest Log: 00:00:00.000144 main     Log opened 2018-02-28T09:40:03.879876000Z
2018-02-28 09:40:06 (17345): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2018-02-28 09:40:06 (17345): Guest Log: 00:00:00.003811 main     OS Product: Linux
2018-02-28 09:40:06 (17345): Guest Log: 00:00:00.003936 main     OS Release: 4.1.19-boot2docker
2018-02-28 09:40:06 (17345): Guest Log: 00:00:00.003990 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-02-28 09:40:06 (17345): Guest Log: 00:00:00.000144 main     Log opened 2018-02-28T09:40:03.879876000Z
2018-02-28 09:40:06 (17345): Guest Log: 00:00:00.003811 main     OS Product: Linux
2018-02-28 09:40:06 (17345): Guest Log: 00:00:00.003936 main     OS Release: 4.1.19-boot2docker
2018-02-28 09:40:06 (17345): Guest Log: 00:00:00.010028 main     Executable: /sbin/VBoxService
2018-02-28 09:40:06 (17345): Guest Log: 00:00:00.010034 main     Process ID: 835
2018-02-28 09:40:06 (17345): Guest Log: 00:00:00.010035 main     Package type: LINUX_64BITS_GENERIC
2018-02-28 09:40:06 (17345): Guest Log: 00:00:00.003990 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-02-28 09:40:06 (17345): Guest Log: 00:00:00.010028 main     Executable: /sbin/VBoxService
2018-02-28 09:40:06 (17345): Guest Log: 00:00:00.010034 main     Process ID: 835
2018-02-28 09:40:06 (17345): Guest Log: 00:00:00.010035 main     Package type: LINUX_64BITS_GENERIC
2018-02-28 09:40:06 (17345): Guest Log: 00:00:00.021568 main     5.0.16 r105871 started. Verbose level = 0
2018-02-28 09:40:06 (17345): Guest Log: 00:00:00.021568 main     5.0.16 r105871 started. Verbose level = 0
2018-02-28 09:40:06 (17345): Guest Log: 00:00:00.045966 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2018-02-28 09:40:06 (17345): Guest Log: 00:00:00.046067 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2018-02-28 09:40:06 (17345): Guest Log: Mounting BOINC shared/...
2018-02-28 09:40:06 (17345): Guest Log: -------------------
2018-02-28 09:40:06 (17345): Guest Log: Wed Feb 28 08:40:05 UTC 2018
2018-02-28 09:40:11 (17345): Guest Log: 00:00:05.063150 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2018-02-28 09:40:11 (17345): Guest Log: Wed Feb 28 08:40:10 UTC 2018
2018-02-28 09:40:11 (17345): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2018-02-28 09:40:11 (17345): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2018-02-28 09:40:11 (17345): Guest Log:     inet 127.0.0.1/8 scope host lo
2018-02-28 09:40:11 (17345): Guest Log:        valid_lft forever preferred_lft forever
2018-02-28 09:40:11 (17345): Guest Log:     inet6 ::1/128 scope host 
2018-02-28 09:40:11 (17345): Guest Log:        valid_lft forever preferred_lft forever
2018-02-28 09:40:11 (17345): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2018-02-28 09:40:11 (17345): Guest Log:     link/ether 3e:13:b7:75:dd:77 brd ff:ff:ff:ff:ff:ff
2018-02-28 09:40:11 (17345): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2018-02-28 09:40:11 (17345): Guest Log:     link/ether 08:00:27:02:56:ba brd ff:ff:ff:ff:ff:ff
2018-02-28 09:40:11 (17345): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2018-02-28 09:40:11 (17345): Guest Log:        valid_lft forever preferred_lft forever
2018-02-28 09:40:11 (17345): Guest Log:     inet6 fe80::a00:27ff:fe02:56ba/64 scope link 
2018-02-28 09:40:11 (17345): Guest Log:        valid_lft forever preferred_lft forever
2018-02-28 09:40:11 (17345): Guest Log: -------------------
2018-02-28 09:40:11 (17345): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2018-02-28 09:40:11 (17345): Guest Log: Waiting for Docker daemon to start...
2018-02-28 09:40:12 (17345): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2018-02-28 09:40:12 (17345): Guest Log: Running boinc_app...
2018-02-28 09:40:12 (17345): Guest Log: Importing Docker image from BOINC...
2018-02-28 09:40:12 (17345): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-02-28 09:40:12 (17345): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /
2018-02-28 09:40:12 (17345): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-02-28 09:40:12 (17345): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-02-28 09:40:12 (17345): Guest Log: shared                  277.7G     45.8G    231.9G  16% /root/shared
2018-02-28 09:40:12 (17345): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /var/lib/docker/aufs
2018-02-28 09:40:17 (17345): Guest Log: 00:00:10.064146 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2018-02-28 09:40:34 (17345): Guest Log: doing docker load...
2018-02-28 09:40:58 (17345): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-02-28 09:40:58 (17345): Guest Log: tmpfs                     2.6G    774.3M      1.9G  29% /
2018-02-28 09:40:58 (17345): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-02-28 09:40:58 (17345): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-02-28 09:40:58 (17345): Guest Log: shared                  277.7G     45.6G    232.1G  16% /root/shared
2018-02-28 09:40:58 (17345): Guest Log: tmpfs                     2.6G    774.3M      1.9G  29% /var/lib/docker/aufs
2018-02-28 09:40:58 (17345): Guest Log:               total        used        free      shared  buff/cache   available
2018-02-28 09:40:58 (17345): Guest Log: Mem:           3007          52        2138         774         816        2140
2018-02-28 09:40:58 (17345): Guest Log: Swap:           700           0         700
2018-02-28 09:40:58 (17345): Guest Log: Building apps directory...
2018-02-28 09:41:02 (17345): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2018-02-28 09:41:11 (17345): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077_links.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2018-02-28 09:41:11 (17345): Guest Log: mv /root/shared/appsSource/rappture /root/shared/apps/share64/debian7/environ.d
2018-02-28 09:41:11 (17345): Guest Log: Prerun diagnostics...
2018-02-28 09:41:11 (17345): Guest Log: REPOSITORY            TAG                 IMAGE ID            CREATED             SIZE
2018-02-28 09:41:11 (17345): Guest Log: nanohub_apps_octave   4                   e3b06620cce8        12 weeks ago        599.1 MB
2018-02-28 09:41:11 (17345): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2018-02-28 09:41:11 (17345): Guest Log: 610.2M	/var/lib/docker
2018-02-28 09:41:11 (17345): Guest Log:               total        used        free      shared  buff/cache   available
2018-02-28 09:41:11 (17345): Guest Log: Swap:           700           0         700
2018-02-28 09:41:11 (17345): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-02-28 09:41:11 (17345): Guest Log: tmpfs                     2.6G    774.4M      1.9G  29% /
2018-02-28 09:41:11 (17345): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-02-28 09:41:11 (17345): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-02-28 09:41:11 (17345): Guest Log: shared                  277.7G     45.6G    232.0G  16% /root/shared
2018-02-28 09:41:11 (17345): Guest Log: tmpfs                     2.6G    774.4M      1.9G  29% /var/lib/docker/aufs
2018-02-28 09:41:11 (17345): Guest Log: Running... 
2018-02-28 09:41:11 (17345): Guest Log: 06495004_13.boinc
2018-02-28 09:41:11 (17345): Guest Log: 06495004_13.sh
2018-02-28 09:41:35 (17345): Guest Log: boinc_app exited (0)
2018-02-28 09:41:35 (17345): Guest Log: Saving results...
2018-02-28 09:41:35 (17345): Guest Log: 06495004_13_output.tar.gz
2018-02-28 09:41:35 (17345): VM Completion File Detected.
2018-02-28 09:41:35 (17345): Powering off VM.
2018-02-28 09:41:36 (17345): Successfully stopped VM.
2018-02-28 09:41:36 (17345): Deregistering VM. (boinc_5c795dc4a9b9a0a8, slot#1)
2018-02-28 09:41:36 (17345): Removing network bandwidth throttle group from VM.
2018-02-28 09:41:36 (17345): Removing storage controller(s) from VM.
2018-02-28 09:41:36 (17345): Removing VM from VirtualBox.
2018-02-28 09:41:36 (17345): Removing virtual ISO 9660 disk from VirtualBox.
09:41:42 (17345): called boinc_finish(0)

</stderr_txt>
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