Task 229733

Name	06495005_06_3
Workunit	149974
Created	28 Feb 2018, 0:49:28 UTC
Sent	28 Feb 2018, 0:49:33 UTC
Report deadline	28 Feb 2018, 8:49:33 UTC
Received	28 Feb 2018, 8:55:47 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	361
Run time	10 min 55 sec
CPU time	5 min 1 sec
Validate state	Valid
Credit	7.53
Device peak FLOPS	3.40 GFLOPS
Application version	boinc2docker v1.11 (vbox64_mt) x86_64-pc-linux-gnu
Peak working set size	110.89 MB
Peak swap size	3.59 GB
Peak disk usage	934.81 MB
Stderr output

<core_client_version>7.6.31</core_client_version>
<![CDATA[
<stderr_txt>
2018-02-28 09:43:06 (28539): vboxwrapper (7.7.26197): starting
2018-02-28 09:43:07 (28539): Feature: Checkpoint interval offset (166 seconds)
2018-02-28 09:43:07 (28539): Detected: VirtualBox VboxManage Interface (Version: 5.2.6)
2018-02-28 09:43:07 (28539): Detected: Minimum checkpoint interval (600.000000 seconds)
2018-02-28 09:43:07 (28539): Create VM. (boinc_a709639300aed1ac, slot#6)
2018-02-28 09:43:07 (28539): Updating drive controller type and model for desired configuration.
2018-02-28 09:43:08 (28539): Setting Memory Size for VM. (3072MB)
2018-02-28 09:43:08 (28539): Setting CPU Count for VM. (1)
2018-02-28 09:43:08 (28539): Setting Chipset Options for VM.
2018-02-28 09:43:09 (28539): Setting Boot Options for VM.
2018-02-28 09:43:09 (28539): Setting Network Configuration for NAT.
2018-02-28 09:43:09 (28539): Enabling VM Network Access.
2018-02-28 09:43:09 (28539): Disabling USB Support for VM.
2018-02-28 09:43:09 (28539): Disabling COM Port Support for VM.
2018-02-28 09:43:10 (28539): Disabling LPT Port Support for VM.
2018-02-28 09:43:10 (28539): Disabling Audio Support for VM.
2018-02-28 09:43:10 (28539): Disabling Clipboard Support for VM.
2018-02-28 09:43:10 (28539): Disabling Drag and Drop Support for VM.
2018-02-28 09:43:11 (28539): Adding storage controller(s) to VM.
2018-02-28 09:43:11 (28539): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2018-02-28 09:43:11 (28539): Adding VirtualBox Guest Additions to VM.
2018-02-28 09:43:11 (28539): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2018-02-28 09:43:11 (28539): Enabling shared directory for VM.
2018-02-28 09:43:12 (28539): Starting VM. (boinc_a709639300aed1ac, slot#6)
2018-02-28 09:43:14 (28539): Successfully started VM. (PID = '29294')
2018-02-28 09:43:14 (28539): Reporting VM Process ID to BOINC.
2018-02-28 09:43:14 (28539): Guest Log: BIOS: VirtualBox 5.2.6
2018-02-28 09:43:14 (28539): Guest Log: CPUID EDX: 0x078bfbff
2018-02-28 09:43:14 (28539): VM state change detected. (old = 'poweroff', new = 'running')
2018-02-28 09:43:14 (28539): Preference change detected
2018-02-28 09:43:14 (28539): Setting CPU throttle for VM. (100%)
2018-02-28 09:43:15 (28539): Setting checkpoint interval to 6000 seconds. (Higher value of (Preference: 6000 seconds) or (Vbox_job.xml: 600 seconds))
2018-02-28 09:43:17 (28539): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2018-02-28 09:43:17 (28539): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2018-02-28 09:43:17 (28539): Guest Log: BIOS: Boot from Hard Disk 0 failed
2018-02-28 09:43:17 (28539): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2018-02-28 09:43:17 (28539): Guest Log: BIOS: Booting from CD-ROM...
2018-02-28 09:43:18 (28539): Guest Log: BIOS: KBD: unsupported int 16h function 03
2018-02-28 09:43:18 (28539): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2018-02-28 09:43:31 (28539): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2018-02-28 09:43:31 (28539): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2018-02-28 09:43:40 (28539): Guest Log: net.ipv4.ip_forward = 1
2018-02-28 09:43:40 (28539): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2018-02-28 09:43:40 (28539): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-02-28 09:43:40 (28539): Guest Log: sysctl: "cannot stat %s" is an unknown key
2018-02-28 09:43:40 (28539): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-02-28 09:43:40 (28539): Guest Log: Segmentation fault
2018-02-28 09:43:40 (28539): Guest Log: automount ...
2018-02-28 09:43:40 (28539): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2018-02-28 09:43:40 (28539): Guest Log: automount over.
2018-02-28 09:43:40 (28539): Guest Log: [1;32mSetting hostname to [1;35mboot2docker[0;39m [1;32mDone.[0;39m
2018-02-28 09:43:40 (28539): Guest Log: Wed Feb 28 09:43:38 UTC 2018 dhcp -------------------------------
2018-02-28 09:43:45 (28539): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2018-02-28 09:43:45 (28539): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1348)
2018-02-28 09:43:46 (28539): Guest Log: Wed Feb 28 09:43:44 UTC 2018 dhcp -------------------------------
2018-02-28 09:43:46 (28539): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2018-02-28 09:43:46 (28539): Guest Log: 00:00:00.000128 main     Log opened 2018-02-28T09:43:44.659287000Z
2018-02-28 09:43:46 (28539): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2018-02-28 09:43:46 (28539): Guest Log: 00:00:00.000128 main     Log opened 2018-02-28T09:43:44.659287000Z
2018-02-28 09:43:46 (28539): Guest Log: 00:00:00.003939 main     OS Product: Linux
2018-02-28 09:43:46 (28539): Guest Log: 00:00:00.004032 main     OS Release: 4.1.19-boot2docker
2018-02-28 09:43:46 (28539): Guest Log: 00:00:00.004080 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-02-28 09:43:46 (28539): Guest Log: 00:00:00.004123 main     Executable: /sbin/VBoxService
2018-02-28 09:43:46 (28539): Guest Log: 00:00:00.004125 main     Process ID: 854
2018-02-28 09:43:46 (28539): Guest Log: 00:00:00.004126 main     Package type: LINUX_64BITS_GENERIC
2018-02-28 09:43:46 (28539): Guest Log: 00:00:00.003939 main     OS Product: Linux
2018-02-28 09:43:46 (28539): Guest Log: 00:00:00.004032 main     OS Release: 4.1.19-boot2docker
2018-02-28 09:43:46 (28539): Guest Log: 00:00:00.004080 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-02-28 09:43:46 (28539): Guest Log: 00:00:00.004123 main     Executable: /sbin/VBoxService
2018-02-28 09:43:46 (28539): Guest Log: 00:00:00.004125 main     Process ID: 854
2018-02-28 09:43:46 (28539): Guest Log: 00:00:00.004126 main     Package type: LINUX_64BITS_GENERIC
2018-02-28 09:43:46 (28539): Guest Log: 00:00:00.013516 main     5.0.16 r105871 started. Verbose level = 0
2018-02-28 09:43:46 (28539): Guest Log: 00:00:00.013516 main     5.0.16 r105871 started. Verbose level = 0
2018-02-28 09:43:46 (28539): Guest Log: 00:00:00.029838 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2018-02-28 09:43:46 (28539): Guest Log: 00:00:00.029941 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2018-02-28 09:43:46 (28539): Guest Log: Mounting BOINC shared/...
2018-02-28 09:43:46 (28539): Guest Log: -------------------
2018-02-28 09:43:46 (28539): Guest Log: Wed Feb 28 08:43:46 UTC 2018
2018-02-28 09:43:51 (28539): Guest Log: 00:00:05.032565 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2018-02-28 09:43:51 (28539): Guest Log: Wed Feb 28 08:43:51 UTC 2018
2018-02-28 09:43:51 (28539): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2018-02-28 09:43:51 (28539): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2018-02-28 09:43:51 (28539): Guest Log:     inet 127.0.0.1/8 scope host lo
2018-02-28 09:43:51 (28539): Guest Log:        valid_lft forever preferred_lft forever
2018-02-28 09:43:51 (28539): Guest Log:     inet6 ::1/128 scope host 
2018-02-28 09:43:51 (28539): Guest Log:        valid_lft forever preferred_lft forever
2018-02-28 09:43:51 (28539): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2018-02-28 09:43:51 (28539): Guest Log:     link/ether 2e:92:6f:83:cf:9f brd ff:ff:ff:ff:ff:ff
2018-02-28 09:43:51 (28539): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2018-02-28 09:43:51 (28539): Guest Log:     link/ether 08:00:27:2e:6a:79 brd ff:ff:ff:ff:ff:ff
2018-02-28 09:43:51 (28539): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2018-02-28 09:43:51 (28539): Guest Log:        valid_lft forever preferred_lft forever
2018-02-28 09:43:51 (28539): Guest Log:     inet6 fe80::a00:27ff:fe2e:6a79/64 scope link 
2018-02-28 09:43:51 (28539): Guest Log:        valid_lft forever preferred_lft forever
2018-02-28 09:43:51 (28539): Guest Log: -------------------
2018-02-28 09:43:51 (28539): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2018-02-28 09:43:51 (28539): Guest Log: Waiting for Docker daemon to start...
2018-02-28 09:43:54 (28539): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2018-02-28 09:43:54 (28539): Guest Log: Running boinc_app...
2018-02-28 09:43:54 (28539): Guest Log: Importing Docker image from BOINC...
2018-02-28 09:43:54 (28539): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-02-28 09:43:54 (28539): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /
2018-02-28 09:43:54 (28539): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-02-28 09:43:54 (28539): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-02-28 09:43:54 (28539): Guest Log: shared                  277.7G     46.0G    231.6G  17% /root/shared
2018-02-28 09:43:54 (28539): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /var/lib/docker/aufs
2018-02-28 09:43:56 (28539): Guest Log: 00:00:10.034932 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2018-02-28 09:44:06 (28539): Guest Log: doing docker load...
2018-02-28 09:44:22 (28539): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-02-28 09:44:22 (28539): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2018-02-28 09:44:22 (28539): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-02-28 09:44:22 (28539): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-02-28 09:44:22 (28539): Guest Log: shared                  277.7G     44.8G    232.9G  16% /root/shared
2018-02-28 09:44:22 (28539): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /var/lib/docker/aufs
2018-02-28 09:44:22 (28539): Guest Log:               total        used        free      shared  buff/cache   available
2018-02-28 09:44:22 (28539): Guest Log: Mem:           3007          48        2256         663         702        2256
2018-02-28 09:44:22 (28539): Guest Log: Swap:           700           0         700
2018-02-28 09:44:22 (28539): Guest Log: Building apps directory...
2018-02-28 09:44:22 (28539): Guest Log: tar: ./r15/bin/main_mcr/.META/manifest.xml: time stamp 2035-10-29 06:32:22 is 557444879.690561642 s in the future
2018-02-28 09:44:27 (28539): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2018-02-28 09:44:37 (28539): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077_links.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2018-02-28 09:44:37 (28539): Guest Log: mv /root/shared/appsSource/rappture /root/shared/apps/share64/debian7/environ.d
2018-02-28 09:52:58 (28539): Guest Log: Prerun diagnostics...
2018-02-28 09:52:58 (28539): Guest Log: REPOSITORY                    TAG                 IMAGE ID            CREATED             SIZE
2018-02-28 09:52:58 (28539): Guest Log: nanohub_apps_share64_matlab   4                   32c863520615        12 weeks ago        488.2 MB
2018-02-28 09:52:58 (28539): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2018-02-28 09:52:58 (28539): Guest Log: 499.0M	/var/lib/docker
2018-02-28 09:52:58 (28539): Guest Log:               total        used        free      shared  buff/cache   available
2018-02-28 09:52:58 (28539): Guest Log: Mem:           3007          36        2232         663         737        2262
2018-02-28 09:52:58 (28539): Guest Log: Swap:           700           0         700
2018-02-28 09:52:58 (28539): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-02-28 09:52:58 (28539): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2018-02-28 09:52:58 (28539): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-02-28 09:52:58 (28539): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-02-28 09:52:58 (28539): Guest Log: shared                  277.7G     47.7G    230.0G  17% /root/shared
2018-02-28 09:52:58 (28539): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /var/lib/docker/aufs
2018-02-28 09:52:58 (28539): Guest Log: Running... 
2018-02-28 09:52:58 (28539): Guest Log: 06495005_06.boinc
2018-02-28 09:52:58 (28539): Guest Log: 06495005_06.sh
2018-02-28 09:54:06 (28539): Guest Log: boinc_app exited (0)
2018-02-28 09:54:06 (28539): Guest Log: Saving results...
2018-02-28 09:54:06 (28539): Guest Log: 06495005_06_output.tar.gz
2018-02-28 09:54:06 (28539): VM Completion File Detected.
2018-02-28 09:54:06 (28539): Powering off VM.
2018-02-28 09:54:06 (28539): Successfully stopped VM.
2018-02-28 09:54:06 (28539): Deregistering VM. (boinc_a709639300aed1ac, slot#6)
2018-02-28 09:54:06 (28539): Removing network bandwidth throttle group from VM.
2018-02-28 09:54:07 (28539): Removing storage controller(s) from VM.
2018-02-28 09:54:07 (28539): Removing VM from VirtualBox.
2018-02-28 09:54:07 (28539): Removing virtual ISO 9660 disk from VirtualBox.
09:54:12 (28539): called boinc_finish(0)

</stderr_txt>
]]>