Task 2321022
| Name | 07230017_006_1 |
| Workunit | 1706155 |
| Created | 27 May 2019, 19:32:54 UTC |
| Sent | 27 May 2019, 19:57:54 UTC |
| Report deadline | 1 Jun 2019, 19:57:54 UTC |
| Received | 28 May 2019, 6:25:14 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 983 |
| Run time | 1 min 9 sec |
| CPU time | 31 sec |
| Validate state | Valid |
| Credit | 0.91 |
| Device peak FLOPS | 4.59 GFLOPS |
| Application version | boinc2docker v1.12 (vbox64_mt) x86_64-pc-linux-gnu |
| Peak working set size | 2.29 GB |
| Peak swap size | 3.71 GB |
| Peak disk usage | 290.14 MB |
Stderr output
<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
2019-05-28 02:12:43 (28591): vboxwrapper (7.7.26197): starting
2019-05-28 02:12:43 (28591): Feature: Checkpoint interval offset (249 seconds)
2019-05-28 02:12:43 (28591): Detected: VirtualBox VboxManage Interface (Version: 5.2.18)
2019-05-28 02:12:43 (28591): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-05-28 02:12:43 (28591): Create VM. (boinc_717232d27c8323a2, slot#0)
2019-05-28 02:12:43 (28591): Updating drive controller type and model for desired configuration.
2019-05-28 02:12:43 (28591): Setting Memory Size for VM. (3072MB)
2019-05-28 02:12:43 (28591): Setting CPU Count for VM. (1)
2019-05-28 02:12:43 (28591): Setting Chipset Options for VM.
2019-05-28 02:12:43 (28591): Setting Boot Options for VM.
2019-05-28 02:12:44 (28591): Setting Network Configuration for NAT.
2019-05-28 02:12:44 (28591): Enabling VM Network Access.
2019-05-28 02:12:44 (28591): Disabling USB Support for VM.
2019-05-28 02:12:44 (28591): Disabling COM Port Support for VM.
2019-05-28 02:12:44 (28591): Disabling LPT Port Support for VM.
2019-05-28 02:12:44 (28591): Disabling Audio Support for VM.
2019-05-28 02:12:44 (28591): Disabling Clipboard Support for VM.
2019-05-28 02:12:44 (28591): Disabling Drag and Drop Support for VM.
2019-05-28 02:12:44 (28591): Adding storage controller(s) to VM.
2019-05-28 02:12:44 (28591): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2019-05-28 02:12:44 (28591): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-05-28 02:12:45 (28591): Enabling shared directory for VM.
2019-05-28 02:12:45 (28591): Starting VM. (boinc_717232d27c8323a2, slot#0)
2019-05-28 02:12:46 (28591): Successfully started VM. (PID = '28939')
2019-05-28 02:12:46 (28591): Reporting VM Process ID to BOINC.
2019-05-28 02:12:46 (28591): Guest Log: BIOS: VirtualBox 5.2.18
2019-05-28 02:12:46 (28591): Guest Log: CPUID EDX: 0x078bfbff
2019-05-28 02:12:46 (28591): VM state change detected. (old = 'poweroff', new = 'running')
2019-05-28 02:12:46 (28591): Preference change detected
2019-05-28 02:12:46 (28591): Setting CPU throttle for VM. (100%)
2019-05-28 02:12:46 (28591): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2019-05-28 02:12:48 (28591): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-05-28 02:12:48 (28591): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2019-05-28 02:12:48 (28591): Guest Log: BIOS: Boot from Hard Disk 0 failed
2019-05-28 02:12:48 (28591): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2019-05-28 02:12:48 (28591): Guest Log: BIOS: Booting from CD-ROM...
2019-05-28 02:12:49 (28591): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-05-28 02:12:49 (28591): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000
2019-05-28 02:12:56 (28591): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-05-28 02:12:56 (28591): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-05-28 02:12:56 (28591): Guest Log: net.ipv4.ip_forward = 1
2019-05-28 02:12:56 (28591): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2019-05-28 02:12:56 (28591): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-05-28 02:12:56 (28591): Guest Log: sysctl: "cannot stat %s" is an unknown key
2019-05-28 02:12:56 (28591): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-05-28 02:12:56 (28591): Guest Log: Segmentation fault
2019-05-28 02:12:56 (28591): Guest Log: automount ...
2019-05-28 02:12:56 (28591): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2019-05-28 02:12:56 (28591): Guest Log: automount over.
2019-05-28 02:12:56 (28591): Guest Log: [1;32mSetting hostname to [1;35mboot2docker[0;39m [1;32mDone.[0;39m
2019-05-28 02:12:56 (28591): Guest Log: Tue May 28 02:12:54 UTC 2019 dhcp -------------------------------
2019-05-28 02:13:02 (28591): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1066)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00 (1285)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXCPU:00 (1286)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00 (1287)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0 (1288)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0/event0 (1289)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00 (1290)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1 (1291)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1/event1 (1292)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00 (1293)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00 (1294)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00 (1295)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00/power_supply/AC (1296)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00 (1297)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/device:01 (1298)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6 (1299)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6/event5 (1300)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1301)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1302)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1303)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1304)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1305)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1306)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1307)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1308)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1309)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00 (1310)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1311)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1312)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1313)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1314)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1315)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1316)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1317)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1318)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:02 (1320)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1321)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1322)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1323)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1324)
2019-05-28 02:13:02 (28591): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:01 (1325)
2019-05-28 02:13:03 (28591): Guest Log: Tue May 28 02:13:00 UTC 2019 dhcp -------------------------------
2019-05-28 02:13:03 (28591): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log
2019-05-28 02:13:03 (28591): Guest Log: 00:00:00.000058 main Log opened 2019-05-28T02:13:00.585160000Z
2019-05-28 02:13:03 (28591): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log
2019-05-28 02:13:03 (28591): Guest Log: 00:00:00.000058 main Log opened 2019-05-28T02:13:00.585160000Z
2019-05-28 02:13:03 (28591): Guest Log: 00:00:00.002327 main OS Product: Linux
2019-05-28 02:13:03 (28591): Guest Log: 00:00:00.002362 main OS Release: 4.1.19-boot2docker
2019-05-28 02:13:03 (28591): Guest Log: 00:00:00.002392 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-05-28 02:13:03 (28591): Guest Log: 00:00:00.002421 main Executable: /sbin/VBoxService
2019-05-28 02:13:03 (28591): Guest Log: 00:00:00.002422 main Process ID: 833
2019-05-28 02:13:03 (28591): Guest Log: 00:00:00.002423 main Package type: LINUX_64BITS_GENERIC
2019-05-28 02:13:03 (28591): Guest Log: 00:00:00.002327 main OS Product: Linux
2019-05-28 02:13:03 (28591): Guest Log: 00:00:00.002362 main OS Release: 4.1.19-boot2docker
2019-05-28 02:13:03 (28591): Guest Log: 00:00:00.002392 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-05-28 02:13:03 (28591): Guest Log: 00:00:00.002421 main Executable: /sbin/VBoxService
2019-05-28 02:13:03 (28591): Guest Log: 00:00:00.002422 main Process ID: 833
2019-05-28 02:13:03 (28591): Guest Log: 00:00:00.002423 main Package type: LINUX_64BITS_GENERIC
2019-05-28 02:13:03 (28591): Guest Log: 00:00:00.007818 main 5.0.16 r105871 started. Verbose level = 0
2019-05-28 02:13:03 (28591): Guest Log: 00:00:00.007818 main 5.0.16 r105871 started. Verbose level = 0
2019-05-28 02:13:03 (28591): Guest Log: 00:00:00.012960 vminfo rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2019-05-28 02:13:03 (28591): Guest Log: 00:00:00.013006 vminfo Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2019-05-28 02:13:03 (28591): Guest Log: Mounting BOINC shared/...
2019-05-28 02:13:03 (28591): Guest Log: -------------------
2019-05-28 02:13:03 (28591): Guest Log: Tue May 28 06:13:02 UTC 2019
2019-05-28 02:13:08 (28591): Guest Log: 00:00:05.013542 vminfo Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2019-05-28 02:13:08 (28591): Guest Log: Tue May 28 06:13:07 UTC 2019
2019-05-28 02:13:08 (28591): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default
2019-05-28 02:13:08 (28591): Guest Log: link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2019-05-28 02:13:08 (28591): Guest Log: inet 127.0.0.1/8 scope host lo
2019-05-28 02:13:08 (28591): Guest Log: valid_lft forever preferred_lft forever
2019-05-28 02:13:08 (28591): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default
2019-05-28 02:13:08 (28591): Guest Log: link/ether de:80:d1:bf:ab:be brd ff:ff:ff:ff:ff:ff
2019-05-28 02:13:08 (28591): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2019-05-28 02:13:08 (28591): Guest Log: link/ether 08:00:27:ec:dc:64 brd ff:ff:ff:ff:ff:ff
2019-05-28 02:13:08 (28591): Guest Log: inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2019-05-28 02:13:08 (28591): Guest Log: valid_lft forever preferred_lft forever
2019-05-28 02:13:08 (28591): Guest Log: -------------------
2019-05-28 02:13:08 (28591): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2019-05-28 02:13:08 (28591): Guest Log: Waiting for Docker daemon to start...
2019-05-28 02:13:09 (28591): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE
2019-05-28 02:13:09 (28591): Guest Log: Running boinc_app...
2019-05-28 02:13:09 (28591): Guest Log: Importing Docker image from BOINC...
2019-05-28 02:13:09 (28591): Guest Log: Filesystem Size Used Available Use% Mounted on
2019-05-28 02:13:09 (28591): Guest Log: tmpfs 2.6G 164.1M 2.5G 6% /
2019-05-28 02:13:09 (28591): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2019-05-28 02:13:09 (28591): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2019-05-28 02:13:09 (28591): Guest Log: shared 457.0G 54.5G 402.4G 12% /root/shared
2019-05-28 02:13:09 (28591): Guest Log: tmpfs 2.6G 164.1M 2.5G 6% /var/lib/docker/aufs
2019-05-28 02:13:13 (28591): Guest Log: 00:00:10.014881 vminfo Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2019-05-28 02:13:18 (28591): Guest Log: doing docker load...
2019-05-28 02:13:28 (28591): Guest Log: Filesystem Size Used Available Use% Mounted on
2019-05-28 02:13:28 (28591): Guest Log: tmpfs 2.6G 803.4M 1.9G 30% /
2019-05-28 02:13:28 (28591): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2019-05-28 02:13:28 (28591): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2019-05-28 02:13:28 (28591): Guest Log: shared 457.0G 54.9G 402.1G 12% /root/shared
2019-05-28 02:13:28 (28591): Guest Log: tmpfs 2.6G 803.4M 1.9G 30% /var/lib/docker/aufs
2019-05-28 02:13:28 (28591): Guest Log: total used free shared buff/cache available
2019-05-28 02:13:28 (28591): Guest Log: Mem: 3007 50 2106 803 849 2110
2019-05-28 02:13:28 (28591): Guest Log: Swap: 700 0 700
2019-05-28 02:13:28 (28591): Guest Log: Building apps directory...
2019-05-28 02:13:33 (28591): Guest Log: Prerun diagnostics...
2019-05-28 02:13:33 (28591): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE
2019-05-28 02:13:33 (28591): Guest Log: nanohub_apps_scipy 4 1c97f9c9808f 17 months ago 627.2 MB
2019-05-28 02:13:33 (28591): Guest Log: CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
2019-05-28 02:13:33 (28591): Guest Log: 639.3M /var/lib/docker
2019-05-28 02:13:33 (28591): Guest Log: total used free shared buff/cache available
2019-05-28 02:13:33 (28591): Guest Log: Mem: 3007 50 2105 803 851 2109
2019-05-28 02:13:33 (28591): Guest Log: Swap: 700 0 700
2019-05-28 02:13:33 (28591): Guest Log: Filesystem Size Used Available Use% Mounted on
2019-05-28 02:13:33 (28591): Guest Log: tmpfs 2.6G 803.4M 1.9G 30% /
2019-05-28 02:13:33 (28591): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2019-05-28 02:13:33 (28591): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2019-05-28 02:13:33 (28591): Guest Log: shared 457.0G 55.1G 401.8G 12% /root/shared
2019-05-28 02:13:33 (28591): Guest Log: tmpfs 2.6G 803.4M 1.9G 30% /var/lib/docker/aufs
2019-05-28 02:13:33 (28591): Guest Log: Running...
2019-05-28 02:13:33 (28591): Guest Log: 07230017_006.boinc
2019-05-28 02:13:33 (28591): Guest Log: 07230017_006.sh
2019-05-28 02:13:44 (28591): Guest Log: boinc_app exited (0)
2019-05-28 02:13:44 (28591): Guest Log: Saving results...
2019-05-28 02:13:44 (28591): Guest Log: 07230017_006_output.tar.gz
2019-05-28 02:13:44 (28591): VM Completion File Detected.
2019-05-28 02:13:44 (28591): Powering off VM.
2019-05-28 02:13:45 (28591): Successfully stopped VM.
2019-05-28 02:13:45 (28591): Deregistering VM. (boinc_717232d27c8323a2, slot#0)
2019-05-28 02:13:45 (28591): Removing network bandwidth throttle group from VM.
2019-05-28 02:13:45 (28591): Removing storage controller(s) from VM.
2019-05-28 02:13:45 (28591): Removing VM from VirtualBox.
2019-05-28 02:13:45 (28591): Removing virtual ISO 9660 disk from VirtualBox.
02:13:50 (28591): called boinc_finish(0)
</stderr_txt>
]]>
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