Task 2372294

Name 07225856_116_3
Workunit 1623407
Created 3 Jun 2019, 2:49:04 UTC
Sent 3 Jun 2019, 2:53:42 UTC
Report deadline 8 Jun 2019, 2:53:42 UTC
Received 3 Jun 2019, 6:17:11 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 215
Run time 2 min 35 sec
CPU time 1 min 29 sec
Validate state Valid
Credit 0.27
Device peak FLOPS 2.24 GFLOPS
Application version boinc2docker v1.12 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 93.45 MB
Peak swap size 3.77 GB
Peak disk usage 290.22 MB

Stderr output

<core_client_version>7.4.23</core_client_version>
<![CDATA[
<stderr_txt>
2019-06-03 01:59:46 (15757): vboxwrapper (7.7.26197): starting
2019-06-03 01:59:46 (15757): Feature: Checkpoint interval offset (281 seconds)
2019-06-03 01:59:46 (15757): Detected: VirtualBox VboxManage Interface (Version: 5.1.8)
2019-06-03 01:59:46 (15757): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-06-03 01:59:47 (15757): Create VM. (boinc_0297c7610e80e09e, slot#1)
2019-06-03 01:59:47 (15757): Updating drive controller type and model for desired configuration.
2019-06-03 01:59:52 (15757): Setting Memory Size for VM. (3072MB)
2019-06-03 01:59:52 (15757): Setting CPU Count for VM. (1)
2019-06-03 01:59:53 (15757): Setting Chipset Options for VM.
2019-06-03 01:59:53 (15757): Setting Boot Options for VM.
2019-06-03 01:59:53 (15757): Setting Network Configuration for NAT.
2019-06-03 01:59:53 (15757): Enabling VM Network Access.
2019-06-03 01:59:53 (15757): Disabling USB Support for VM.
2019-06-03 01:59:53 (15757): Disabling COM Port Support for VM.
2019-06-03 01:59:54 (15757): Disabling LPT Port Support for VM.
2019-06-03 01:59:54 (15757): Disabling Audio Support for VM.
2019-06-03 01:59:54 (15757): Disabling Clipboard Support for VM.
2019-06-03 01:59:54 (15757): Disabling Drag and Drop Support for VM.
2019-06-03 01:59:54 (15757): Adding storage controller(s) to VM.
2019-06-03 01:59:54 (15757): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2019-06-03 01:59:54 (15757): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-06-03 01:59:54 (15757): Enabling shared directory for VM.
2019-06-03 01:59:55 (15757): Starting VM. (boinc_0297c7610e80e09e, slot#1)
2019-06-03 01:59:56 (15757): Successfully started VM. (PID = '16583')
2019-06-03 01:59:56 (15757): Reporting VM Process ID to BOINC.
2019-06-03 01:59:56 (15757): Guest Log: BIOS: VirtualBox 5.1.8
2019-06-03 01:59:57 (15757): VM state change detected. (old = 'poweroff', new = 'running')
2019-06-03 01:59:57 (15757): Preference change detected
2019-06-03 01:59:57 (15757): Setting CPU throttle for VM. (75%)
2019-06-03 01:59:58 (15757): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2019-06-03 01:59:58 (15757): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-06-03 01:59:58 (15757): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2019-06-03 01:59:58 (15757): Guest Log: BIOS: Boot from Hard Disk 0 failed
2019-06-03 01:59:58 (15757): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2019-06-03 01:59:58 (15757): Guest Log: BIOS: Booting from CD-ROM...
2019-06-03 02:00:01 (15757): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-06-03 02:00:01 (15757): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2019-06-03 02:00:22 (15757): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-06-03 02:00:22 (15757): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-06-03 02:00:22 (15757): Guest Log: net.ipv4.ip_forward = 1
2019-06-03 02:00:22 (15757): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2019-06-03 02:00:22 (15757): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-06-03 02:00:22 (15757): Guest Log: sysctl: "cannot stat %s" is an unknown key
2019-06-03 02:00:22 (15757): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-06-03 02:00:22 (15757): Guest Log: Segmentation fault
2019-06-03 02:00:23 (15757): Guest Log: automount ...
2019-06-03 02:00:23 (15757): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2019-06-03 02:00:24 (15757): Guest Log: automount over.
2019-06-03 02:00:24 (15757): Guest Log: Setting hostname to boot2docker Done.
2019-06-03 02:00:24 (15757): Guest Log: Mon Jun  3 02:00:21 UTC 2019 dhcp -------------------------------
2019-06-03 02:00:29 (15757): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2019-06-03 02:00:29 (15757): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1301)
2019-06-03 02:00:29 (15757): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1304)
2019-06-03 02:00:29 (15757): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1305)
2019-06-03 02:00:29 (15757): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1306)
2019-06-03 02:00:29 (15757): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1308)
2019-06-03 02:00:29 (15757): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1311)
2019-06-03 02:00:29 (15757): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1313)
2019-06-03 02:00:29 (15757): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1314)
2019-06-03 02:00:29 (15757): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1315)
2019-06-03 02:00:29 (15757): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1316)
2019-06-03 02:00:29 (15757): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1317)
2019-06-03 02:00:29 (15757): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1318)
2019-06-03 02:00:31 (15757): Guest Log: Mon Jun  3 02:00:28 UTC 2019 dhcp -------------------------------
2019-06-03 02:00:31 (15757): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-06-03 02:00:31 (15757): Guest Log: 00:00:00.000785 main     Log opened 2019-06-03T02:00:28.692181000Z
2019-06-03 02:00:31 (15757): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-06-03 02:00:31 (15757): Guest Log: 00:00:00.000785 main     Log opened 2019-06-03T02:00:28.692181000Z
2019-06-03 02:00:31 (15757): Guest Log: 00:00:00.007222 main     OS Product: Linux
2019-06-03 02:00:31 (15757): Guest Log: 00:00:00.007291 main     OS Release: 4.1.19-boot2docker
2019-06-03 02:00:31 (15757): Guest Log: 00:00:00.007352 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-06-03 02:00:31 (15757): Guest Log: 00:00:00.007474 main     Executable: /sbin/VBoxService
2019-06-03 02:00:31 (15757): Guest Log: 00:00:00.007476 main     Process ID: 735
2019-06-03 02:00:31 (15757): Guest Log: 00:00:00.007477 main     Package type: LINUX_64BITS_GENERIC
2019-06-03 02:00:31 (15757): Guest Log: 00:00:00.007222 main     OS Product: Linux
2019-06-03 02:00:31 (15757): Guest Log: 000:00:00.010983 main     5.0.16 r105871 started. Verbose level = 0
2019-06-03 02:00:31 (15757): Guest Log: 0:00:00.007291 main     OS Release: 4.1.19-boot2docker
2019-06-03 02:00:31 (15757): Guest Log: 00:00:00.007352 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-06-03 02:00:31 (15757): Guest Log: 00:00:00.007474 main     Executable: /sbin/VBoxService
2019-06-03 02:00:31 (15757): Guest Log: 00:00:00.007476 main     Process ID: 735
2019-06-03 02:00:31 (15757): Guest Log: 00:00:00.041534 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2019-06-03 02:00:31 (15757): Guest Log: 00:00:00.007477 main     Package type: LINUX_64BITS_GENERIC
2019-06-03 02:00:31 (15757): Guest Log: 00:00:00.010983 main     5.0.16 r105871 started. Verbose level = 0
2019-06-03 02:00:31 (15757): Guest Log: 00:00:00.048929 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2019-06-03 02:00:32 (15757): Guest Log: Mounting BOINC shared/...
2019-06-03 02:00:32 (15757): Guest Log: -------------------
2019-06-03 02:00:32 (15757): Guest Log: Mon Jun  3 06:00:31 UTC 2019
2019-06-03 02:00:36 (15757): Guest Log: 00:00:05.050729 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2019-06-03 02:00:37 (15757): Guest Log: Mon Jun  3 06:00:36 UTC 2019
2019-06-03 02:00:37 (15757): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2019-06-03 02:00:37 (15757): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2019-06-03 02:00:37 (15757): Guest Log:     inet 127.0.0.1/8 scope host lo
2019-06-03 02:00:37 (15757): Guest Log:        valid_lft forever preferred_lft forever
2019-06-03 02:00:37 (15757): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2019-06-03 02:00:37 (15757): Guest Log:     link/ether ae:4d:c5:2c:b1:c8 brd ff:ff:ff:ff:ff:ff
2019-06-03 02:00:37 (15757): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2019-06-03 02:00:37 (15757): Guest Log:     link/ether 08:00:27:4c:16:a0 brd ff:ff:ff:ff:ff:ff
2019-06-03 02:00:37 (15757): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2019-06-03 02:00:37 (15757): Guest Log:        valid_lft forever preferred_lft forever
2019-06-03 02:00:37 (15757): Guest Log: -------------------
2019-06-03 02:00:37 (15757): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2019-06-03 02:00:37 (15757): Guest Log: Waiting for Docker daemon to start...
2019-06-03 02:00:40 (15757): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2019-06-03 02:00:40 (15757): Guest Log: Running boinc_app...
2019-06-03 02:00:40 (15757): Guest Log: Importing Docker image from BOINC...
2019-06-03 02:00:40 (15757): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-06-03 02:00:40 (15757): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /
2019-06-03 02:00:40 (15757): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-06-03 02:00:40 (15757): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-06-03 02:00:40 (15757): Guest Log: shared                  886.1G     88.3G    797.7G  10% /root/shared
2019-06-03 02:00:40 (15757): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /var/lib/docker/aufs
2019-06-03 02:00:41 (15757): Guest Log: 00:00:10.053832 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2019-06-03 02:01:01 (15757): Guest Log: doing docker load...
2019-06-03 02:01:32 (15757): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-06-03 02:01:32 (15757): Guest Log: tmpfs                     2.6G    803.4M      1.9G  30% /
2019-06-03 02:01:32 (15757): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-06-03 02:01:32 (15757): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-06-03 02:01:32 (15757): Guest Log: shared                  886.1G     88.1G    797.9G  10% /root/shared
2019-06-03 02:01:32 (15757): Guest Log: tmpfs                     2.6G    803.4M      1.9G  30% /var/lib/docker/aufs
2019-06-03 02:01:32 (15757): Guest Log:               total        used        free      shared  buff/cache   available
2019-06-03 02:01:32 (15757): Guest Log: Mem:           3007          51        2106         803         849        2109
2019-06-03 02:01:32 (15757): Guest Log: Swap:           702           0         702
2019-06-03 02:01:32 (15757): Guest Log: Building apps directory...
2019-06-03 02:01:47 (15757): Guest Log: Prerun diagnostics...
2019-06-03 02:01:47 (15757): Guest Log: REPOSITORY           TAG                 IMAGE ID            CREATED             SIZE
2019-06-03 02:01:47 (15757): Guest Log: nanohub_apps_scipy   4                   1c97f9c9808f        18 months ago       627.2 MB
2019-06-03 02:01:47 (15757): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2019-06-03 02:01:47 (15757): Guest Log: 639.3M	/var/lib/docker
2019-06-03 02:01:47 (15757): Guest Log:               total        used        free      shared  buff/cache   available
2019-06-03 02:01:47 (15757): Guest Log: Mem:           3007          54        2102         803         850        2106
2019-06-03 02:01:47 (15757): Guest Log: Swap:           702           0         702
2019-06-03 02:01:47 (15757): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-06-03 02:01:47 (15757): Guest Log: tmpfs                     2.6G    803.4M      1.9G  30% /
2019-06-03 02:01:47 (15757): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-06-03 02:01:47 (15757): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-06-03 02:01:47 (15757): Guest Log: shared                  886.1G     88.2G    797.8G  10% /root/shared
2019-06-03 02:01:47 (15757): Guest Log: tmpfs                     2.6G    803.4M      1.9G  30% /var/lib/docker/aufs
2019-06-03 02:01:47 (15757): Guest Log: Running... 
2019-06-03 02:01:48 (15757): Guest Log: 07225856_116.boinc
2019-06-03 02:01:48 (15757): Guest Log: 07225856_116.sh
2019-06-03 02:02:13 (15757): Guest Log: boinc_app exited (0)
2019-06-03 02:02:13 (15757): Guest Log: Saving results...
2019-06-03 02:02:13 (15757): Guest Log: 07225856_116_output.tar.gz
2019-06-03 02:02:13 (15757): VM Completion File Detected.
2019-06-03 02:02:13 (15757): Powering off VM.
2019-06-03 02:02:14 (15757): Successfully stopped VM.
2019-06-03 02:02:14 (15757): Deregistering VM. (boinc_0297c7610e80e09e, slot#1)
2019-06-03 02:02:14 (15757): Removing network bandwidth throttle group from VM.
2019-06-03 02:02:14 (15757): Removing storage controller(s) from VM.
2019-06-03 02:02:14 (15757): Removing VM from VirtualBox.
2019-06-03 02:02:14 (15757): Removing virtual ISO 9660 disk from VirtualBox.
02:02:19 (15757): called boinc_finish(0)

</stderr_txt>
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