Task 243879

Name 06538945_08_2
Workunit 157464
Created 27 Mar 2018, 15:35:03 UTC
Sent 27 Mar 2018, 15:35:42 UTC
Report deadline 27 Mar 2018, 23:35:42 UTC
Received 27 Mar 2018, 19:04:49 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 216
Run time 8 min 39 sec
CPU time 6 min 8 sec
Validate state Valid
Credit 1.64
Device peak FLOPS 2.22 GFLOPS
Application version boinc2docker v1.11 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 93.55 MB
Peak swap size 3.41 GB
Peak disk usage 2.11 GB

Stderr output

<core_client_version>7.4.23</core_client_version>
<![CDATA[
<stderr_txt>
2018-03-27 14:56:02 (5230): vboxwrapper (7.7.26197): starting
2018-03-27 14:56:02 (5230): Feature: Checkpoint interval offset (182 seconds)
2018-03-27 14:56:02 (5230): Detected: VirtualBox VboxManage Interface (Version: 5.1.8)
2018-03-27 14:56:02 (5230): Detected: Minimum checkpoint interval (600.000000 seconds)
2018-03-27 14:56:02 (5230): Create VM. (boinc_86a07c80fd3efae2, slot#3)
2018-03-27 14:56:02 (5230): Updating drive controller type and model for desired configuration.
2018-03-27 14:56:03 (5230): Setting Memory Size for VM. (3072MB)
2018-03-27 14:56:03 (5230): Setting CPU Count for VM. (1)
2018-03-27 14:56:03 (5230): Setting Chipset Options for VM.
2018-03-27 14:56:03 (5230): Setting Boot Options for VM.
2018-03-27 14:56:03 (5230): Setting Network Configuration for NAT.
2018-03-27 14:56:03 (5230): Enabling VM Network Access.
2018-03-27 14:56:03 (5230): Disabling USB Support for VM.
2018-03-27 14:56:04 (5230): Disabling COM Port Support for VM.
2018-03-27 14:56:04 (5230): Disabling LPT Port Support for VM.
2018-03-27 14:56:04 (5230): Disabling Audio Support for VM.
2018-03-27 14:56:04 (5230): Disabling Clipboard Support for VM.
2018-03-27 14:56:04 (5230): Disabling Drag and Drop Support for VM.
2018-03-27 14:56:04 (5230): Adding storage controller(s) to VM.
2018-03-27 14:56:04 (5230): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2018-03-27 14:56:04 (5230): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2018-03-27 14:56:04 (5230): Enabling shared directory for VM.
2018-03-27 14:56:04 (5230): Starting VM. (boinc_86a07c80fd3efae2, slot#3)
2018-03-27 14:56:06 (5230): Successfully started VM. (PID = '5675')
2018-03-27 14:56:06 (5230): Reporting VM Process ID to BOINC.
2018-03-27 14:56:06 (5230): Guest Log: BIOS: VirtualBox 5.1.8
2018-03-27 14:56:06 (5230): VM state change detected. (old = 'poweroff', new = 'running')
2018-03-27 14:56:06 (5230): Preference change detected
2018-03-27 14:56:06 (5230): Setting CPU throttle for VM. (75%)
2018-03-27 14:56:06 (5230): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2018-03-27 14:56:08 (5230): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2018-03-27 14:56:08 (5230): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2018-03-27 14:56:08 (5230): Guest Log: BIOS: Boot from Hard Disk 0 failed
2018-03-27 14:56:08 (5230): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2018-03-27 14:56:08 (5230): Guest Log: BIOS: Booting from CD-ROM...
2018-03-27 14:56:10 (5230): Guest Log: BIOS: KBD: unsupported int 16h function 03
2018-03-27 14:56:10 (5230): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2018-03-27 14:56:31 (5230): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2018-03-27 14:56:31 (5230): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2018-03-27 14:56:32 (5230): Guest Log: net.ipv4.ip_forward = 1
2018-03-27 14:56:32 (5230): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2018-03-27 14:56:32 (5230): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-03-27 14:56:32 (5230): Guest Log: sysctl: "cannot stat %s" is an unknown key
2018-03-27 14:56:32 (5230): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-03-27 14:56:32 (5230): Guest Log: Segmentation fault
2018-03-27 14:56:33 (5230): Guest Log: automount ...
2018-03-27 14:56:34 (5230): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2018-03-27 14:56:34 (5230): Guest Log: automount over.
2018-03-27 14:56:34 (5230): Guest Log: Setting hostname to boot2docker Done.
2018-03-27 14:56:34 (5230): Guest Log: Tue Mar 27 14:56:32 UTC 2018 dhcp -------------------------------
2018-03-27 14:56:40 (5230): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2018-03-27 14:56:40 (5230): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1316)
2018-03-27 14:56:41 (5230): Guest Log: Tue Mar 27 14:56:38 UTC 2018 dhcp -------------------------------
2018-03-27 14:56:42 (5230): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2018-03-27 14:56:42 (5230): Guest Log: 00:00:00.000962 main     Log opened 2018-03-27T14:56:39.470462000Z
2018-03-27 14:56:42 (5230): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2018-03-27 14:56:42 (5230): Guest Log: 00:00:00.000962 main     Log opened 2018-03-27T14:56:39.470462000Z
2018-03-27 14:56:42 (5230): Guest Log: 00:00:00.032440 main     OS Product: Linux
2018-03-27 14:56:42 (5230): Guest Log: 00:00:00.032642 main     OS Release: 4.1.19-boot2docker
2018-03-27 14:56:42 (5230): Guest Log: 00:00:00.032704 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-03-27 14:56:42 (5230): Guest Log: 00:00:00.032761 main     Executable: /sbin/VBoxService
2018-03-27 14:56:42 (5230): Guest Log: 00:00:00.032763 main     Process ID: 746
2018-03-27 14:56:42 (5230): Guest Log: 00:00:00.032764 main     Package type: LINUX_64BITS_GENERIC
2018-03-27 14:56:42 (5230): Guest Log: 000:00:00.034840 main     5.0.16 r105871 started. Verbose level = 0
2018-03-27 14:56:42 (5230): Guest Log: 0:00:00.032440 main     OS Product: Linux
2018-03-27 14:56:42 (5230): Guest Log: 00:00:00.032642 main     OS Release: 4.1.19-boot2docker
2018-03-27 14:56:42 (5230): Guest Log: 00:00:00.032704 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-03-27 14:56:42 (5230): Guest Log: 00:00:00.032761 main     Executable: /sbin/VBoxService
2018-03-27 14:56:42 (5230): Guest Log: 00:00:00.032763 main     Process ID: 746
2018-03-27 14:56:42 (5230): Guest Log: 00:00:00.032764 main     Package type: LINUX_64BITS_GENERIC
2018-03-27 14:56:42 (5230): Guest Log: 00:00:00.034840 main     5.0.16 r105871 started. Verbose level = 0
2018-03-27 14:56:42 (5230): Guest Log: 00:00:00.079676 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2018-03-27 14:56:42 (5230): Guest Log: 00:00:00.079893 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2018-03-27 14:56:42 (5230): Guest Log: Mounting BOINC shared/...
2018-03-27 14:56:42 (5230): Guest Log: -------------------
2018-03-27 14:56:42 (5230): Guest Log: Tue Mar 27 18:56:42 UTC 2018
2018-03-27 14:56:47 (5230): Guest Log: 00:00:05.081080 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2018-03-27 14:56:47 (5230): Guest Log: Tue Mar 27 18:56:47 UTC 2018
2018-03-27 14:56:47 (5230): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2018-03-27 14:56:47 (5230): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2018-03-27 14:56:47 (5230): Guest Log:     inet 127.0.0.1/8 scope host lo
2018-03-27 14:56:47 (5230): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2018-03-27 14:56:47 (5230): Guest Log:     link/ether 42:48:4e:e2:d1:da brd ff:ff:ff:ff:ff:ff
2018-03-27 14:56:47 (5230): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2018-03-27 14:56:47 (5230): Guest Log:     link/ether 08:00:27:df:92:87 brd ff:ff:ff:ff:ff:ff
2018-03-27 14:56:47 (5230): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2018-03-27 14:56:47 (5230): Guest Log:        valid_lft forever preferred_lft forever
2018-03-27 14:56:47 (5230): Guest Log: -------------------
2018-03-27 14:56:47 (5230): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2018-03-27 14:56:47 (5230): Guest Log: Waiting for Docker daemon to start...
2018-03-27 14:56:50 (5230): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2018-03-27 14:56:50 (5230): Guest Log: Running boinc_app...
2018-03-27 14:56:50 (5230): Guest Log: Importing Docker image from BOINC...
2018-03-27 14:56:50 (5230): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-03-27 14:56:50 (5230): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /
2018-03-27 14:56:50 (5230): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-03-27 14:56:50 (5230): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-03-27 14:56:50 (5230): Guest Log: shared                  140.1G     31.5G    108.5G  23% /root/shared
2018-03-27 14:56:50 (5230): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /var/lib/docker/aufs
2018-03-27 14:56:52 (5230): Guest Log: 00:00:10.084221 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2018-03-27 14:57:09 (5230): Guest Log: doing docker load...
2018-03-27 14:57:33 (5230): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-03-27 14:57:33 (5230): Guest Log: tmpfs                     2.6G    631.8M      2.0G  23% /
2018-03-27 14:57:33 (5230): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-03-27 14:57:33 (5230): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-03-27 14:57:33 (5230): Guest Log: shared                  140.1G     31.4G    108.7G  22% /root/shared
2018-03-27 14:57:33 (5230): Guest Log: tmpfs                     2.6G    631.8M      2.0G  23% /var/lib/docker/aufs
2018-03-27 14:57:33 (5230): Guest Log:               total        used        free      shared  buff/cache   available
2018-03-27 14:57:33 (5230): Guest Log: Mem:           3007          50        2287         631         669        2287
2018-03-27 14:57:33 (5230): Guest Log: Swap:           701           0         701
2018-03-27 14:57:33 (5230): Guest Log: Building apps directory...
2018-03-27 14:57:38 (5230): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2018-03-27 14:57:45 (5230): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077_links.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2018-03-27 14:57:45 (5230): Guest Log: mv /root/shared/appsSource/rappture /root/shared/apps/share64/debian7/environ.d
2018-03-27 15:03:13 (5230): Guest Log: Prerun diagnostics...
2018-03-27 15:03:13 (5230): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2018-03-27 15:03:13 (5230): Guest Log: nanohub_apps_base   11                  42db2bf7db3d        3 months ago        458.1 MB
2018-03-27 15:03:13 (5230): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2018-03-27 15:03:13 (5230): Guest Log: 467.8M	/var/lib/docker
2018-03-27 15:03:13 (5230): Guest Log:               total        used        free      shared  buff/cache   available
2018-03-27 15:03:13 (5230): Guest Log: Mem:           3007          52        2270         631         683        2282
2018-03-27 15:03:13 (5230): Guest Log: Swap:           701           0         701
2018-03-27 15:03:13 (5230): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-03-27 15:03:13 (5230): Guest Log: tmpfs                     2.6G    631.9M      2.0G  23% /
2018-03-27 15:03:13 (5230): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-03-27 15:03:13 (5230): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-03-27 15:03:13 (5230): Guest Log: shared                  140.1G     33.4G    106.7G  24% /root/shared
2018-03-27 15:03:13 (5230): Guest Log: tmpfs                     2.6G    631.9M      2.0G  23% /var/lib/docker/aufs
2018-03-27 15:03:13 (5230): Guest Log: Running... 
2018-03-27 15:03:15 (5230): Guest Log: 06538945_08.boinc
2018-03-27 15:03:15 (5230): Guest Log: 06538945_08.sh
2018-03-27 15:04:32 (5230): Guest Log: boinc_app exited (0)
2018-03-27 15:04:32 (5230): Guest Log: Saving results...
2018-03-27 15:04:32 (5230): Guest Log: 06538945_08_output.tar.gz
2018-03-27 15:04:32 (5230): VM Completion File Detected.
2018-03-27 15:04:32 (5230): Powering off VM.
2018-03-27 15:04:33 (5230): Successfully stopped VM.
2018-03-27 15:04:33 (5230): Deregistering VM. (boinc_86a07c80fd3efae2, slot#3)
2018-03-27 15:04:33 (5230): Removing network bandwidth throttle group from VM.
2018-03-27 15:04:33 (5230): Removing storage controller(s) from VM.
2018-03-27 15:04:33 (5230): Removing VM from VirtualBox.
2018-03-27 15:04:33 (5230): Removing virtual ISO 9660 disk from VirtualBox.
15:04:38 (5230): called boinc_finish(0)

</stderr_txt>
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