Task 260254

Name 06584156_03_3
Workunit 165360
Created 18 Apr 2018, 21:06:14 UTC
Sent 18 Apr 2018, 21:08:25 UTC
Report deadline 19 Apr 2018, 5:08:25 UTC
Received 19 Apr 2018, 13:47:21 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 218
Run time 16 hours 11 min 59 sec
CPU time 12 hours 24 min
Validate state Task was reported too late to validate
Credit 0.00
Device peak FLOPS 2.16 GFLOPS
Application version boinc2docker v1.11 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 93.64 MB
Peak swap size 3.59 GB
Peak disk usage 218.22 MB

Stderr output

<core_client_version>7.4.23</core_client_version>
<![CDATA[
<stderr_txt>
2018-04-18 17:33:14 (25598): vboxwrapper (7.7.26197): starting
2018-04-18 17:33:14 (25598): Feature: Checkpoint interval offset (471 seconds)
2018-04-18 17:33:14 (25598): Detected: VirtualBox VboxManage Interface (Version: 5.1.8)
2018-04-18 17:33:14 (25598): Detected: Minimum checkpoint interval (600.000000 seconds)
2018-04-18 17:33:14 (25598): Create VM. (boinc_15d11fa2828fc390, slot#4)
2018-04-18 17:33:14 (25598): Updating drive controller type and model for desired configuration.
2018-04-18 17:33:15 (25598): Setting Memory Size for VM. (3072MB)
2018-04-18 17:33:15 (25598): Setting CPU Count for VM. (1)
2018-04-18 17:33:15 (25598): Setting Chipset Options for VM.
2018-04-18 17:33:15 (25598): Setting Boot Options for VM.
2018-04-18 17:33:15 (25598): Setting Network Configuration for NAT.
2018-04-18 17:33:15 (25598): Enabling VM Network Access.
2018-04-18 17:33:15 (25598): Disabling USB Support for VM.
2018-04-18 17:33:15 (25598): Disabling COM Port Support for VM.
2018-04-18 17:33:15 (25598): Disabling LPT Port Support for VM.
2018-04-18 17:33:15 (25598): Disabling Audio Support for VM.
2018-04-18 17:33:15 (25598): Disabling Clipboard Support for VM.
2018-04-18 17:33:15 (25598): Disabling Drag and Drop Support for VM.
2018-04-18 17:33:15 (25598): Adding storage controller(s) to VM.
2018-04-18 17:33:15 (25598): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2018-04-18 17:33:16 (25598): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2018-04-18 17:33:16 (25598): Enabling shared directory for VM.
2018-04-18 17:33:16 (25598): Starting VM. (boinc_15d11fa2828fc390, slot#4)
2018-04-18 17:33:17 (25598): Successfully started VM. (PID = '26005')
2018-04-18 17:33:17 (25598): Reporting VM Process ID to BOINC.
2018-04-18 17:33:18 (25598): Guest Log: BIOS: VirtualBox 5.1.8
2018-04-18 17:33:18 (25598): VM state change detected. (old = 'poweroff', new = 'running')
2018-04-18 17:33:18 (25598): Preference change detected
2018-04-18 17:33:18 (25598): Setting CPU throttle for VM. (75%)
2018-04-18 17:33:18 (25598): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2018-04-18 17:33:20 (25598): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2018-04-18 17:33:20 (25598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2018-04-18 17:33:20 (25598): Guest Log: BIOS: Boot from Hard Disk 0 failed
2018-04-18 17:33:20 (25598): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2018-04-18 17:33:20 (25598): Guest Log: BIOS: Booting from CD-ROM...
2018-04-18 17:33:22 (25598): Guest Log: BIOS: KBD: unsupported int 16h function 03
2018-04-18 17:33:22 (25598): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2018-04-18 17:33:42 (25598): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2018-04-18 17:33:42 (25598): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2018-04-18 17:33:43 (25598): Guest Log: net.ipv4.ip_forward = 1
2018-04-18 17:33:43 (25598): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2018-04-18 17:33:43 (25598): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-04-18 17:33:43 (25598): Guest Log: sysctl: "cannot stat %s" is an unknown key
2018-04-18 17:33:43 (25598): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-04-18 17:33:43 (25598): Guest Log: Segmentation fault
2018-04-18 17:33:44 (25598): Guest Log: automount ...
2018-04-18 17:33:44 (25598): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2018-04-18 17:33:45 (25598): Guest Log: automount over.
2018-04-18 17:33:45 (25598): Guest Log: Setting hostname to boot2docker Done.
2018-04-18 17:33:45 (25598): Guest Log: Wed Apr 18 17:33:42 UTC 2018 dhcp -------------------------------
2018-04-18 17:33:49 (25598): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2018-04-18 17:33:49 (25598): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1318)
2018-04-18 17:33:51 (25598): Guest Log: Wed Apr 18 17:33:48 UTC 2018 dhcp -------------------------------
2018-04-18 17:33:51 (25598): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2018-04-18 17:33:51 (25598): Guest Log: 00:00:00.000837 main     Log opened 2018-04-18T17:33:49.299317000Z
2018-04-18 17:33:51 (25598): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2018-04-18 17:33:51 (25598): Guest Log: 00:00:00.000837 main   00:00:00.004922 main     OS Product: Linux
2018-04-18 17:33:51 (25598): Guest Log: 00:00:00.004994 main     OS Release: 4.1.19-boot2docker
2018-04-18 17:33:51 (25598): Guest Log: 00:00:00.005054 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-04-18 17:33:51 (25598): Guest Log: 00:00:00.005111 main     Executable: /sbin/VBoxService
2018-04-18 17:33:51 (25598): Guest Log: 00:00:00.005113 main     Process ID: 760
2018-04-18 17:33:51 (25598): Guest Log: 00:00:00.005114 main     Package type: LINUX_64BITS_GENERIC
2018-04-18 17:33:51 (25598): Guest Log:   Log opened 2018-04-18T17:33:49.299317000Z
2018-04-18 17:33:51 (25598): Guest Log: 00:00:00.004922 main     OS Product: Linux
2018-04-18 17:33:51 (25598): Guest Log: 00:00:00.004994 main     OS Release: 4.1.19-boot2docker
2018-04-18 17:33:51 (25598): Guest Log: 00:00:00.005054 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-04-18 17:33:51 (25598): Guest Log: 00:00:00.005111 main     Executable: /sbin/VBoxService
2018-04-18 17:33:51 (25598): Guest Log: 00:00:00.005113 main     Process ID: 760
2018-04-18 17:33:51 (25598): Guest Log: 00:00:00.005114 main     Package type: LINUX_64BITS_GENERIC
2018-04-18 17:33:51 (25598): Guest Log: 00:00:00.057269 main     5.0.16 r105871 started. Verbose level = 0
2018-04-18 17:33:51 (25598): Guest Log: 00:00:00.057269 main     5.0.16 r105871 started. Verbose level = 0
2018-04-18 17:33:51 (25598): Guest Log: 00:00:00.085746 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2018-04-18 17:33:51 (25598): Guest Log: 00:00:00.085987 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2018-04-18 17:33:52 (25598): Guest Log: Mounting BOINC shared/...
2018-04-18 17:33:52 (25598): Guest Log: -------------------
2018-04-18 17:33:52 (25598): Guest Log: Wed Apr 18 21:33:52 UTC 2018
2018-04-18 17:33:56 (25598): Guest Log: 00:00:05.096067 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2018-04-18 17:33:58 (25598): Guest Log: Wed Apr 18 21:33:57 UTC 2018
2018-04-18 17:33:58 (25598): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2018-04-18 17:33:58 (25598): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2018-04-18 17:33:58 (25598): Guest Log:     inet 127.0.0.1/8 scope host lo
2018-04-18 17:33:58 (25598): Guest Log:        valid_lft forever preferred_lft forever
2018-04-18 17:33:58 (25598): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2018-04-18 17:33:58 (25598): Guest Log:     link/ether 2a:5a:2a:73:e8:f9 brd ff:ff:ff:ff:ff:ff
2018-04-18 17:33:58 (25598): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2018-04-18 17:33:58 (25598): Guest Log:     link/ether 08:00:27:59:85:25 brd ff:ff:ff:ff:ff:ff
2018-04-18 17:33:58 (25598): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2018-04-18 17:33:58 (25598): Guest Log:        valid_lft forever preferred_lft forever
2018-04-18 17:33:58 (25598): Guest Log: -------------------
2018-04-18 17:33:58 (25598): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2018-04-18 17:33:58 (25598): Guest Log: Waiting for Docker daemon to start...
2018-04-18 17:34:00 (25598): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2018-04-18 17:34:00 (25598): Guest Log: Running boinc_app...
2018-04-18 17:34:00 (25598): Guest Log: Importing Docker image from BOINC...
2018-04-18 17:34:00 (25598): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-04-18 17:34:00 (25598): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /
2018-04-18 17:34:00 (25598): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-04-18 17:34:00 (25598): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-04-18 17:34:00 (25598): Guest Log: shared                  916.3G     79.4G    836.9G   9% /root/shared
2018-04-18 17:34:00 (25598): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /var/lib/docker/aufs
2018-04-18 17:34:01 (25598): Guest Log: 00:00:10.118810 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2018-04-18 17:34:17 (25598): Guest Log: doing docker load...
2018-04-18 17:34:41 (25598): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-04-18 17:34:41 (25598): Guest Log: tmpfs                     2.6G    631.8M      2.0G  23% /
2018-04-18 17:34:41 (25598): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-04-18 17:34:41 (25598): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-04-18 17:34:41 (25598): Guest Log: shared                  916.3G     79.2G    837.0G   9% /root/shared
2018-04-18 17:34:41 (25598): Guest Log: tmpfs                     2.6G    631.8M      2.0G  23% /var/lib/docker/aufs
2018-04-18 17:34:41 (25598): Guest Log:               total        used        free      shared  buff/cache   available
2018-04-18 17:34:41 (25598): Guest Log: Mem:           3007          48        2289         631         669        2289
2018-04-18 17:34:41 (25598): Guest Log: Swap:           701           0         701
2018-04-18 17:34:41 (25598): Guest Log: Building apps directory...
2018-04-18 17:34:45 (25598): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2018-04-18 17:34:54 (25598): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077_links.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2018-04-18 17:34:54 (25598): Guest Log: mv /root/shared/appsSource/rappture /root/shared/apps/share64/debian7/environ.d
2018-04-18 17:34:54 (25598): Guest Log: Prerun diagnostics...
2018-04-18 17:34:54 (25598): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2018-04-18 17:34:54 (25598): Guest Log: nanohub_apps_base   11                  42db2bf7db3d        4 months ago        458.1 MB
2018-04-18 17:34:55 (25598): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2018-04-18 17:34:55 (25598): Guest Log: 467.8M	/var/lib/docker
2018-04-18 17:34:55 (25598): Guest Log:               total        used        free      shared  buff/cache   available
2018-04-18 17:34:55 (25598): Guest Log: Mem:           3007          48        2288         631         670        2289
2018-04-18 17:34:55 (25598): Guest Log: Swap:           701           0         701
2018-04-18 17:34:55 (25598): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-04-18 17:34:55 (25598): Guest Log: tmpfs                     2.6G    631.9M      2.0G  23% /
2018-04-18 17:34:55 (25598): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-04-18 17:34:55 (25598): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-04-18 17:34:55 (25598): Guest Log: shared                  916.3G     79.3G    837.0G   9% /root/shared
2018-04-18 17:34:55 (25598): Guest Log: tmpfs                     2.6G    631.9M      2.0G  23% /var/lib/docker/aufs
2018-04-18 17:34:55 (25598): Guest Log: Running... 
2018-04-18 17:34:56 (25598): Guest Log: 06584156_03.boinc
2018-04-18 17:34:56 (25598): Guest Log: 06584156_03.sh
2018-04-18 19:12:21 (25598): Status Report: Elapsed Time: '6000.548587'
2018-04-18 19:12:21 (25598): Status Report: CPU Time: '4596.380000'
2018-04-18 20:51:22 (25598): Status Report: Elapsed Time: '12000.621586'
2018-04-18 20:51:22 (25598): Status Report: CPU Time: '9180.540000'
2018-04-18 22:30:23 (25598): Status Report: Elapsed Time: '18000.790533'
2018-04-18 22:30:23 (25598): Status Report: CPU Time: '13712.280000'
2018-04-19 00:09:24 (25598): Status Report: Elapsed Time: '24000.790533'
2018-04-19 00:09:24 (25598): Status Report: CPU Time: '18247.380000'
2018-04-19 01:48:24 (25598): Status Report: Elapsed Time: '30000.790533'
2018-04-19 01:48:24 (25598): Status Report: CPU Time: '22791.570000'
2018-04-19 03:27:25 (25598): Status Report: Elapsed Time: '36000.790533'
2018-04-19 03:27:25 (25598): Status Report: CPU Time: '27340.150000'
2018-04-19 05:06:25 (25598): Status Report: Elapsed Time: '42000.790533'
2018-04-19 05:06:25 (25598): Status Report: CPU Time: '31899.710000'
2018-04-19 06:45:26 (25598): Status Report: Elapsed Time: '48000.790533'
2018-04-19 06:45:26 (25598): Status Report: CPU Time: '36426.070000'
2018-04-19 08:24:26 (25598): Status Report: Elapsed Time: '54000.790533'
2018-04-19 08:24:26 (25598): Status Report: CPU Time: '40958.130000'
2018-04-19 09:45:05 (25598): Guest Log: boinc_app exited (0)
2018-04-19 09:45:05 (25598): Guest Log: Saving results...
2018-04-19 09:45:05 (25598): Guest Log: 06584156_03_output.tar.gz
2018-04-19 09:45:05 (25598): VM Completion File Detected.
2018-04-19 09:45:05 (25598): Powering off VM.
2018-04-19 09:45:05 (25598): Successfully stopped VM.
2018-04-19 09:45:05 (25598): Deregistering VM. (boinc_15d11fa2828fc390, slot#4)
2018-04-19 09:45:06 (25598): Removing network bandwidth throttle group from VM.
2018-04-19 09:45:06 (25598): Removing storage controller(s) from VM.
2018-04-19 09:45:06 (25598): Removing VM from VirtualBox.
2018-04-19 09:45:06 (25598): Removing virtual ISO 9660 disk from VirtualBox.
09:45:11 (25598): called boinc_finish(0)

</stderr_txt>
]]>


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