Task 265442

Name 06674144_014_4
Workunit 167323
Created 18 Jun 2018, 3:16:37 UTC
Sent 18 Jun 2018, 3:21:23 UTC
Report deadline 18 Jun 2018, 11:21:23 UTC
Received 18 Jun 2018, 13:27:26 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 216
Run time 5 hours 24 min 58 sec
CPU time 4 hours 10 min 38 sec
Validate state Valid
Credit 38.80
Device peak FLOPS 2.24 GFLOPS
Application version boinc2docker v1.11 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 92.71 MB
Peak swap size 3.98 GB
Peak disk usage 1.27 GB

Stderr output

<core_client_version>7.4.23</core_client_version>
<![CDATA[
<stderr_txt>
2018-06-18 03:58:57 (10383): vboxwrapper (7.7.26197): starting
2018-06-18 03:58:57 (10383): Feature: Checkpoint interval offset (321 seconds)
2018-06-18 03:58:57 (10383): Detected: VirtualBox VboxManage Interface (Version: 5.1.8)
2018-06-18 03:58:57 (10383): Detected: Minimum checkpoint interval (600.000000 seconds)
2018-06-18 03:58:57 (10383): Create VM. (boinc_076848a5bcc01353, slot#4)
2018-06-18 03:58:57 (10383): Updating drive controller type and model for desired configuration.
2018-06-18 03:59:01 (10383): Setting Memory Size for VM. (3072MB)
2018-06-18 03:59:01 (10383): Setting CPU Count for VM. (1)
2018-06-18 03:59:01 (10383): Setting Chipset Options for VM.
2018-06-18 03:59:01 (10383): Setting Boot Options for VM.
2018-06-18 03:59:01 (10383): Setting Network Configuration for NAT.
2018-06-18 03:59:01 (10383): Enabling VM Network Access.
2018-06-18 03:59:01 (10383): Disabling USB Support for VM.
2018-06-18 03:59:01 (10383): Disabling COM Port Support for VM.
2018-06-18 03:59:02 (10383): Disabling LPT Port Support for VM.
2018-06-18 03:59:02 (10383): Disabling Audio Support for VM.
2018-06-18 03:59:02 (10383): Disabling Clipboard Support for VM.
2018-06-18 03:59:02 (10383): Disabling Drag and Drop Support for VM.
2018-06-18 03:59:02 (10383): Adding storage controller(s) to VM.
2018-06-18 03:59:02 (10383): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2018-06-18 03:59:02 (10383): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2018-06-18 03:59:02 (10383): Enabling shared directory for VM.
2018-06-18 03:59:02 (10383): Starting VM. (boinc_076848a5bcc01353, slot#4)
2018-06-18 03:59:04 (10383): Successfully started VM. (PID = '10986')
2018-06-18 03:59:04 (10383): Reporting VM Process ID to BOINC.
2018-06-18 03:59:04 (10383): Guest Log: BIOS: VirtualBox 5.1.8
2018-06-18 03:59:04 (10383): VM state change detected. (old = 'poweroff', new = 'running')
2018-06-18 03:59:04 (10383): Preference change detected
2018-06-18 03:59:04 (10383): Setting CPU throttle for VM. (75%)
2018-06-18 03:59:05 (10383): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2018-06-18 03:59:06 (10383): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2018-06-18 03:59:06 (10383): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2018-06-18 03:59:06 (10383): Guest Log: BIOS: Boot from Hard Disk 0 failed
2018-06-18 03:59:06 (10383): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2018-06-18 03:59:06 (10383): Guest Log: BIOS: Booting from CD-ROM...
2018-06-18 03:59:08 (10383): Guest Log: BIOS: KBD: unsupported int 16h function 03
2018-06-18 03:59:08 (10383): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2018-06-18 03:59:28 (10383): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2018-06-18 03:59:28 (10383): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2018-06-18 03:59:29 (10383): Guest Log: net.ipv4.ip_forward = 1
2018-06-18 03:59:29 (10383): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2018-06-18 03:59:29 (10383): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-06-18 03:59:29 (10383): Guest Log: sysctl: "cannot stat %s" is an unknown key
2018-06-18 03:59:29 (10383): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-06-18 03:59:29 (10383): Guest Log: Segmentation fault
2018-06-18 03:59:30 (10383): Guest Log: automount ...
2018-06-18 03:59:30 (10383): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2018-06-18 03:59:30 (10383): Guest Log: automount over.
2018-06-18 03:59:31 (10383): Guest Log: Setting hostname to boot2docker Done.
2018-06-18 03:59:31 (10383): Guest Log: Mon Jun 18 03:59:28 UTC 2018 dhcp -------------------------------
2018-06-18 03:59:36 (10383): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2018-06-18 03:59:36 (10383): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1318)
2018-06-18 03:59:37 (10383): Guest Log: Mon Jun 18 03:59:35 UTC 2018 dhcp -------------------------------
2018-06-18 03:59:38 (10383): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2018-06-18 03:59:38 (10383): Guest Log: 00:00:00.001024 main     Log opened 2018-06-18T03:59:36.061005000Z
2018-06-18 03:59:38 (10383): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2018-06-18 03:59:38 (10383): Guest Log: 00:00:00.001024 main     Log opened 2018-06-18T03:59:36.061005000Z
2018-06-18 03:59:38 (10383): Guest Log: 00:00:00.007078 main     OS Product: Linux
2018-06-18 03:59:38 (10383): Guest Log: 00:00:00.007151 main     OS Release: 4.1.19-boot2docker
2018-06-18 03:59:38 (10383): Guest Log: 00:00:00.007213 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-06-18 03:59:38 (10383): Guest Log: 00:00:00.007273 main     Executable: /sbin/VBoxService
2018-06-18 03:59:38 (10383): Guest Log: 00:00:00.007275 main     Process ID: 746
2018-06-18 03:59:38 (10383): Guest Log: 00:00:00.007276 main     Package type: LINUX_64BITS_GENERIC
2018-06-18 03:59:38 (10383): Guest Log: 00:00:00.007078 main     OS Product: Linux
2018-06-18 03:59:38 (10383): Guest Log: 00:00:00.007151 00:00:00.010676 main     5.0.16 r105871 started. Verbose level = 0
2018-06-18 03:59:38 (10383): Guest Log: main     OS Release: 4.1.19-boot2docker
2018-06-18 03:59:38 (10383): Guest Log: 00:00:00.061519 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2018-06-18 03:59:38 (10383): Guest Log: 00:00:00.061713 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2018-06-18 03:59:38 (10383): Guest Log: 00:00:00.007213 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-06-18 03:59:38 (10383): Guest Log: 00:00:00.007273 main     Executable: /sbin/VBoxService
2018-06-18 03:59:38 (10383): Guest Log: 00:00:00.007275 main     Process ID: 746
2018-06-18 03:59:38 (10383): Guest Log: 00:00:00.007276 main     Package type: LINUX_64BITS_GENERIC
2018-06-18 03:59:38 (10383): Guest Log: 00:00:00.010676 main     5.0.16 r105871 started. Verbose level = 0
2018-06-18 03:59:38 (10383): Guest Log: Mounting BOINC shared/...
2018-06-18 03:59:38 (10383): Guest Log: -------------------
2018-06-18 03:59:38 (10383): Guest Log: Mon Jun 18 07:59:38 UTC 2018
2018-06-18 03:59:43 (10383): Guest Log: 00:00:05.062728 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2018-06-18 03:59:43 (10383): Guest Log: Mon Jun 18 07:59:43 UTC 2018
2018-06-18 03:59:43 (10383): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2018-06-18 03:59:43 (10383): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2018-06-18 03:59:44 (10383): Guest Log:     inet 127.0.0.1/8 scope host lo
2018-06-18 03:59:44 (10383): Guest Log:        valid_lft forever preferred_lft forever
2018-06-18 03:59:44 (10383): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2018-06-18 03:59:44 (10383): Guest Log:     link/ether 12:db:ad:d6:b8:77 brd ff:ff:ff:ff:ff:ff
2018-06-18 03:59:44 (10383): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2018-06-18 03:59:44 (10383): Guest Log:     link/ether 08:00:27:52:77:91 brd ff:ff:ff:ff:ff:ff
2018-06-18 03:59:44 (10383): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2018-06-18 03:59:44 (10383): Guest Log:        valid_lft forever preferred_lft forever
2018-06-18 03:59:44 (10383): Guest Log: -------------------
2018-06-18 03:59:44 (10383): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2018-06-18 03:59:44 (10383): Guest Log: Waiting for Docker daemon to start...
2018-06-18 03:59:46 (10383): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2018-06-18 03:59:46 (10383): Guest Log: Running boinc_app...
2018-06-18 03:59:46 (10383): Guest Log: Importing Docker image from BOINC...
2018-06-18 03:59:46 (10383): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-06-18 03:59:46 (10383): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /
2018-06-18 03:59:46 (10383): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-06-18 03:59:46 (10383): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-06-18 03:59:46 (10383): Guest Log: shared                  140.1G     42.0G     98.0G  30% /root/shared
2018-06-18 03:59:46 (10383): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /var/lib/docker/aufs
2018-06-18 03:59:48 (10383): Guest Log: 00:00:10.067074 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2018-06-18 04:00:06 (10383): Guest Log: doing docker load...
2018-06-18 04:00:32 (10383): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-06-18 04:00:32 (10383): Guest Log: tmpfs                     2.6G    721.5M      1.9G  27% /
2018-06-18 04:00:32 (10383): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-06-18 04:00:32 (10383): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-06-18 04:00:32 (10383): Guest Log: shared                  140.1G     41.9G     98.2G  30% /root/shared
2018-06-18 04:00:32 (10383): Guest Log: tmpfs                     2.6G    721.5M      1.9G  27% /var/lib/docker/aufs
2018-06-18 04:00:32 (10383): Guest Log:               total        used        free      shared  buff/cache   available
2018-06-18 04:00:32 (10383): Guest Log: Mem:           3007          51        2194         721         761        2194
2018-06-18 04:00:32 (10383): Guest Log: Swap:           701           0         701
2018-06-18 04:00:32 (10383): Guest Log: Building apps directory...
2018-06-18 04:00:36 (10383): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2018-06-18 04:00:44 (10383): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077_links.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2018-06-18 04:00:44 (10383): Guest Log: mv /root/shared/appsSource/rappture /root/shared/apps/share64/debian7/environ.d
2018-06-18 04:03:17 (10383): Guest Log: Prerun diagnostics...
2018-06-18 04:03:18 (10383): Guest Log: REPOSITORY                    TAG                 IMAGE ID            CREATED             SIZE
2018-06-18 04:03:18 (10383): Guest Log: nanohub_apps_share64_octave   5                   a3c939485731        6 months ago        547 MB
2018-06-18 04:03:18 (10383): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2018-06-18 04:03:18 (10383): Guest Log: 557.4M	/var/lib/docker
2018-06-18 04:03:18 (10383): Guest Log:               total        used        free      shared  buff/cache   available
2018-06-18 04:03:18 (10383): Guest Log: Mem:           3007          54        2186         721         766        2191
2018-06-18 04:03:18 (10383): Guest Log: Swap:           701           0         701
2018-06-18 04:03:18 (10383): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-06-18 04:03:18 (10383): Guest Log: tmpfs                     2.6G    721.5M      1.9G  27% /
2018-06-18 04:03:18 (10383): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-06-18 04:03:18 (10383): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-06-18 04:03:18 (10383): Guest Log: shared                  140.1G     42.8G     97.3G  31% /root/shared
2018-06-18 04:03:18 (10383): Guest Log: tmpfs                     2.6G    721.5M      1.9G  27% /var/lib/docker/aufs
2018-06-18 04:03:18 (10383): Guest Log: Running... 
2018-06-18 04:03:19 (10383): Guest Log: 06674144_014.boinc
2018-06-18 04:03:19 (10383): Guest Log: 06674144_014.sh
2018-06-18 05:38:08 (10383): Status Report: Elapsed Time: '6000.853096'
2018-06-18 05:38:08 (10383): Status Report: CPU Time: '4542.730000'
2018-06-18 07:17:11 (10383): Status Report: Elapsed Time: '12001.346675'
2018-06-18 07:17:11 (10383): Status Report: CPU Time: '9130.350000'
2018-06-18 08:56:14 (10383): Status Report: Elapsed Time: '18001.779947'
2018-06-18 08:56:14 (10383): Status Report: CPU Time: '13704.220000'
2018-06-18 09:25:06 (10383): Guest Log: boinc_app exited (0)
2018-06-18 09:25:06 (10383): Guest Log: Saving results...
2018-06-18 09:25:06 (10383): Guest Log: 06674144_014_output.tar.gz
2018-06-18 09:25:06 (10383): VM Completion File Detected.
2018-06-18 09:25:06 (10383): Powering off VM.
2018-06-18 09:25:07 (10383): Successfully stopped VM.
2018-06-18 09:25:07 (10383): Deregistering VM. (boinc_076848a5bcc01353, slot#4)
2018-06-18 09:25:07 (10383): Removing network bandwidth throttle group from VM.
2018-06-18 09:25:07 (10383): Removing storage controller(s) from VM.
2018-06-18 09:25:07 (10383): Removing VM from VirtualBox.
2018-06-18 09:25:07 (10383): Removing virtual ISO 9660 disk from VirtualBox.
09:25:12 (10383): called boinc_finish(0)

</stderr_txt>
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