Task 266047
| Name | 06674651_01_3 |
| Workunit | 167562 |
| Created | 19 Jun 2018, 10:28:00 UTC |
| Sent | 19 Jun 2018, 10:28:15 UTC |
| Report deadline | 19 Jun 2018, 18:28:15 UTC |
| Received | 19 Jun 2018, 18:56:28 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 426 |
| Run time | 8 hours 16 min 57 sec |
| CPU time | 7 hours 59 min 24 sec |
| Validate state | Valid |
| Credit | 89.77 |
| Device peak FLOPS | 2.64 GFLOPS |
| Application version | boinc2docker v1.11 (vbox64_mt) x86_64-pc-linux-gnu |
| Peak working set size | 119.09 MB |
| Peak swap size | 3.95 GB |
| Peak disk usage | 2.76 GB |
Stderr output
<core_client_version>7.6.31</core_client_version>
<![CDATA[
<stderr_txt>
2018-06-19 04:36:59 (11274): vboxwrapper (7.7.26197): starting
2018-06-19 04:36:59 (11274): Feature: Checkpoint interval offset (209 seconds)
2018-06-19 04:36:59 (11274): Detected: VirtualBox VboxManage Interface (Version: 5.1.26)
2018-06-19 04:36:59 (11274): Detected: Minimum checkpoint interval (600.000000 seconds)
2018-06-19 04:36:59 (11274): Create VM. (boinc_fd70f94cfdc2de50, slot#51)
2018-06-19 04:36:59 (11274): Updating drive controller type and model for desired configuration.
2018-06-19 04:37:08 (11274): Setting Memory Size for VM. (3072MB)
2018-06-19 04:37:08 (11274): Setting CPU Count for VM. (1)
2018-06-19 04:37:08 (11274): Setting Chipset Options for VM.
2018-06-19 04:37:08 (11274): Setting Boot Options for VM.
2018-06-19 04:37:08 (11274): Setting Network Configuration for NAT.
2018-06-19 04:37:08 (11274): Enabling VM Network Access.
2018-06-19 04:37:09 (11274): Disabling USB Support for VM.
2018-06-19 04:37:09 (11274): Disabling COM Port Support for VM.
2018-06-19 04:37:09 (11274): Disabling LPT Port Support for VM.
2018-06-19 04:37:09 (11274): Disabling Audio Support for VM.
2018-06-19 04:37:09 (11274): Disabling Clipboard Support for VM.
2018-06-19 04:37:09 (11274): Disabling Drag and Drop Support for VM.
2018-06-19 04:37:09 (11274): Adding storage controller(s) to VM.
2018-06-19 04:37:09 (11274): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2018-06-19 04:37:10 (11274): Adding VirtualBox Guest Additions to VM.
2018-06-19 04:37:10 (11274): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2018-06-19 04:37:10 (11274): Enabling shared directory for VM.
2018-06-19 04:37:10 (11274): Starting VM. (boinc_fd70f94cfdc2de50, slot#51)
2018-06-19 04:37:12 (11274): Successfully started VM. (PID = '17124')
2018-06-19 04:37:12 (11274): Reporting VM Process ID to BOINC.
2018-06-19 04:37:12 (11274): Guest Log: BIOS: VirtualBox 5.1.26
2018-06-19 04:37:12 (11274): VM state change detected. (old = 'poweroff', new = 'running')
2018-06-19 04:37:12 (11274): Preference change detected
2018-06-19 04:37:12 (11274): Setting CPU throttle for VM. (100%)
2018-06-19 04:37:27 (11274): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 600 seconds))
2018-06-19 04:37:30 (11274): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2018-06-19 04:37:30 (11274): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2018-06-19 04:37:30 (11274): Guest Log: BIOS: Boot from Hard Disk 0 failed
2018-06-19 04:37:30 (11274): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2018-06-19 04:37:30 (11274): Guest Log: BIOS: Booting from CD-ROM...
2018-06-19 04:37:32 (11274): Guest Log: BIOS: KBD: unsupported int 16h function 03
2018-06-19 04:37:32 (11274): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000
2018-06-19 04:37:44 (11274): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2018-06-19 04:37:44 (11274): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2018-06-19 04:37:44 (11274): Guest Log: net.ipv4.ip_forward = 1
2018-06-19 04:37:44 (11274): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2018-06-19 04:37:44 (11274): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-06-19 04:37:44 (11274): Guest Log: sysctl: "cannot stat %s" is an unknown key
2018-06-19 04:37:44 (11274): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-06-19 04:37:44 (11274): Guest Log: Segmentation fault
2018-06-19 04:37:45 (11274): Guest Log: automount ...
2018-06-19 04:37:45 (11274): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2018-06-19 04:37:45 (11274): Guest Log: automount over.
2018-06-19 04:37:45 (11274): Guest Log: [1;32mSetting hostname to [1;35mboot2docker[0;39m [1;32mDone.[0;39m
2018-06-19 04:37:45 (11274): Guest Log: Tue Jun 19 04:37:42 UTC 2018 dhcp -------------------------------
2018-06-19 04:37:50 (11274): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1081)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00 (1307)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXCPU:00 (1308)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00 (1309)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0 (1310)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0/event0 (1311)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00 (1312)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1 (1313)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1/event1 (1314)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00 (1316)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00 (1317)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00/power_supply/AC (1318)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00 (1319)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/device:01 (1320)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6 (1321)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6/event5 (1322)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1323)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1324)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1325)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1326)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1327)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1328)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1329)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1330)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1331)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00 (1332)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1333)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1334)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1335)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1336)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1337)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1338)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1339)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1340)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1341)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:02 (1342)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1343)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1344)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1345)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1346)
2018-06-19 04:37:50 (11274): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:01 (1347)
2018-06-19 04:37:51 (11274): Guest Log: Tue Jun 19 04:37:48 UTC 2018 dhcp -------------------------------
2018-06-19 04:37:51 (11274): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log
2018-06-19 04:37:51 (11274): Guest Log: 00:00:00.000182 main Log opened 2018-06-19T04:37:49.082412000Z
2018-06-19 04:37:51 (11274): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log
2018-06-19 04:37:51 (11274): Guest Log: 00:00:00.000182 main Log opened 2018-06-19T04:37:49.082412000Z
2018-06-19 04:37:51 (11274): Guest Log: 00:00:000:00:00.008640 main 5.0.16 r105871 started. Verbose level = 0
2018-06-19 04:37:51 (11274): Guest Log: 0.005458 main OS Release: 4.1.19-boot2docker
2018-06-19 04:37:51 (11274): Guest Log: 00:00:00.005524 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-06-19 04:37:51 (11274): Guest Log: 00:00:00.005587 main Executable: /sbin/VBoxService
2018-06-19 04:37:51 (11274): Guest Log: 00:00:00.005590 main Process ID: 845
2018-06-19 04:37:51 (11274): Guest Log: 00:00:00.000:00:00.021387 vminfo rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2018-06-19 04:37:51 (11274): Guest Log: 00:00:00.021505 vminfo Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2018-06-19 04:37:51 (11274): Guest Log: 05591 main Package type: LINUX_64BITS_GENERIC
2018-06-19 04:37:51 (11274): Guest Log: 00:00:00.008640 main 5.0.16 r105871 started. Verbose level = 0
2018-06-19 04:37:51 (11274): Guest Log: Mounting BOINC shared/...
2018-06-19 04:37:51 (11274): Guest Log: -------------------
2018-06-19 04:37:51 (11274): Guest Log: Tue Jun 19 10:37:50 UTC 2018
2018-06-19 04:37:56 (11274): Guest Log: 00:00:05.022311 vminfo Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2018-06-19 04:37:56 (11274): Guest Log: Tue Jun 19 10:37:55 UTC 2018
2018-06-19 04:37:56 (11274): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default
2018-06-19 04:37:56 (11274): Guest Log: link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2018-06-19 04:37:56 (11274): Guest Log: inet 127.0.0.1/8 scope host lo
2018-06-19 04:37:56 (11274): Guest Log: valid_lft forever preferred_lft forever
2018-06-19 04:37:56 (11274): Guest Log: inet6 ::1/128 scope host
2018-06-19 04:37:56 (11274): Guest Log: valid_lft forever preferred_lft forever
2018-06-19 04:37:56 (11274): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default
2018-06-19 04:37:56 (11274): Guest Log: link/ether 36:75:30:cc:80:ec brd ff:ff:ff:ff:ff:ff
2018-06-19 04:37:56 (11274): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2018-06-19 04:37:56 (11274): Guest Log: link/ether 08:00:27:5a:66:14 brd ff:ff:ff:ff:ff:ff
2018-06-19 04:37:56 (11274): Guest Log: inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2018-06-19 04:37:56 (11274): Guest Log: valid_lft forever preferred_lft forever
2018-06-19 04:37:56 (11274): Guest Log: inet6 fe80::a00:27ff:fe5a:6614/64 scope link
2018-06-19 04:37:56 (11274): Guest Log: valid_lft forever preferred_lft forever
2018-06-19 04:37:56 (11274): Guest Log: -------------------
2018-06-19 04:37:56 (11274): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2018-06-19 04:37:56 (11274): Guest Log: Waiting for Docker daemon to start...
2018-06-19 04:37:57 (11274): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE
2018-06-19 04:37:57 (11274): Guest Log: Running boinc_app...
2018-06-19 04:37:57 (11274): Guest Log: Importing Docker image from BOINC...
2018-06-19 04:37:57 (11274): Guest Log: Filesystem Size Used Available Use% Mounted on
2018-06-19 04:37:57 (11274): Guest Log: tmpfs 2.6G 164.2M 2.5G 6% /
2018-06-19 04:37:57 (11274): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2018-06-19 04:37:57 (11274): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2018-06-19 04:37:57 (11274): Guest Log: shared 166.2G 49.7G 116.5G 30% /root/shared
2018-06-19 04:37:57 (11274): Guest Log: tmpfs 2.6G 164.2M 2.5G 6% /var/lib/docker/aufs
2018-06-19 04:38:00 (11274): Guest Log: 00:00:10.024102 vminfo Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2018-06-19 04:38:10 (11274): Guest Log: doing docker load...
2018-06-19 04:38:29 (11274): Guest Log: Filesystem Size Used Available Use% Mounted on
2018-06-19 04:38:29 (11274): Guest Log: tmpfs 2.6G 631.9M 2.0G 23% /
2018-06-19 04:38:29 (11274): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2018-06-19 04:38:29 (11274): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2018-06-19 04:38:29 (11274): Guest Log: shared 166.2G 48.1G 118.1G 29% /root/shared
2018-06-19 04:38:29 (11274): Guest Log: tmpfs 2.6G 631.9M 2.0G 23% /var/lib/docker/aufs
2018-06-19 04:38:29 (11274): Guest Log: total used free shared buff/cache available
2018-06-19 04:38:29 (11274): Guest Log: Mem: 3007 51 2286 631 669 2286
2018-06-19 04:38:29 (11274): Guest Log: Swap: 700 0 700
2018-06-19 04:38:29 (11274): Guest Log: Building apps directory...
2018-06-19 04:38:33 (11274): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2018-06-19 04:38:41 (11274): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077_links.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2018-06-19 04:38:41 (11274): Guest Log: mv /root/shared/appsSource/rappture /root/shared/apps/share64/debian7/environ.d
2018-06-19 04:45:41 (11274): Guest Log: Prerun diagnostics...
2018-06-19 04:45:41 (11274): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE
2018-06-19 04:45:41 (11274): Guest Log: nanohub_apps_base 11 42db2bf7db3d 6 months ago 458.1 MB
2018-06-19 04:45:41 (11274): Guest Log: CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
2018-06-19 04:45:41 (11274): Guest Log: 467.8M /var/lib/docker
2018-06-19 04:45:41 (11274): Guest Log: total used free shared buff/cache available
2018-06-19 04:45:41 (11274): Guest Log: Mem: 3007 53 2270 631 684 2282
2018-06-19 04:45:41 (11274): Guest Log: Swap: 700 0 700
2018-06-19 04:45:41 (11274): Guest Log: Filesystem Size Used Available Use% Mounted on
2018-06-19 04:45:41 (11274): Guest Log: tmpfs 2.6G 631.9M 2.0G 23% /
2018-06-19 04:45:41 (11274): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2018-06-19 04:45:41 (11274): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2018-06-19 04:45:41 (11274): Guest Log: shared 166.2G 72.8G 93.4G 44% /root/shared
2018-06-19 04:45:41 (11274): Guest Log: tmpfs 2.6G 631.9M 2.0G 23% /var/lib/docker/aufs
2018-06-19 04:45:41 (11274): Guest Log: Running...
2018-06-19 04:45:41 (11274): Guest Log: 06674651_01.boinc
2018-06-19 04:45:41 (11274): Guest Log: 06674651_01.sh
2018-06-19 06:17:14 (11274): Status Report: Elapsed Time: '6002.373254'
2018-06-19 06:17:14 (11274): Status Report: CPU Time: '5513.920000'
2018-06-19 07:57:17 (11274): Status Report: Elapsed Time: '12004.775681'
2018-06-19 07:57:17 (11274): Status Report: CPU Time: '11279.650000'
2018-06-19 09:37:19 (11274): Status Report: Elapsed Time: '18007.160436'
2018-06-19 09:37:19 (11274): Status Report: CPU Time: '17090.840000'
2018-06-19 11:17:21 (11274): Status Report: Elapsed Time: '24008.807257'
2018-06-19 11:17:21 (11274): Status Report: CPU Time: '22904.910000'
2018-06-19 12:56:02 (11274): Guest Log: boinc_app exited (0)
2018-06-19 12:56:02 (11274): Guest Log: Saving results...
2018-06-19 12:56:02 (11274): Guest Log: 06674651_01_output.tar.gz
2018-06-19 12:56:02 (11274): VM Completion File Detected.
2018-06-19 12:56:02 (11274): Powering off VM.
2018-06-19 12:56:03 (11274): Successfully stopped VM.
2018-06-19 12:56:03 (11274): Deregistering VM. (boinc_fd70f94cfdc2de50, slot#51)
2018-06-19 12:56:03 (11274): Removing network bandwidth throttle group from VM.
2018-06-19 12:56:03 (11274): Removing storage controller(s) from VM.
2018-06-19 12:56:04 (11274): Removing VM from VirtualBox.
2018-06-19 12:56:04 (11274): Removing virtual ISO 9660 disk from VirtualBox.
12:56:09 (11274): called boinc_finish(0)
</stderr_txt>
]]>
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