Task 2691027
| Name | 07252478_02_0 |
| Workunit | 2035094 |
| Created | 15 Jun 2019, 6:44:45 UTC |
| Sent | 15 Jun 2019, 19:08:38 UTC |
| Report deadline | 20 Jun 2019, 19:08:38 UTC |
| Received | 18 Jun 2019, 4:08:45 UTC |
| Server state | Over |
| Outcome | Computation error |
| Client state | Compute error |
| Exit status | 197 (0x000000C5) EXIT_TIME_LIMIT_EXCEEDED |
| Computer ID | 2020 |
| Run time | 3 hours 46 min 49 sec |
| CPU time | 3 hours 38 min 41 sec |
| Validate state | Invalid |
| Credit | 0.00 |
| Device peak FLOPS | 3.41 GFLOPS |
| Application version | boinc2docker v1.12 (vbox64_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.90 GB |
| Peak swap size | 3.71 GB |
| Peak disk usage | 843.25 MB |
Stderr output
<core_client_version>7.9.3</core_client_version>
<![CDATA[
<message>
exceeded elapsed time limit 13604.61 (86400.00G/6.35G)</message>
<stderr_txt>
2019-06-17 18:35:27 (18711): vboxwrapper (7.7.26197): starting
2019-06-17 18:35:27 (18711): Feature: Checkpoint interval offset (375 seconds)
2019-06-17 18:35:27 (18711): Detected: VirtualBox VboxManage Interface (Version: 5.2.18)
2019-06-17 18:35:27 (18711): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-06-17 18:35:27 (18711): Create VM. (boinc_5ecefb46fce0fb7e, slot#1)
2019-06-17 18:35:27 (18711): Updating drive controller type and model for desired configuration.
2019-06-17 18:35:28 (18711): Setting Memory Size for VM. (3072MB)
2019-06-17 18:35:28 (18711): Setting CPU Count for VM. (1)
2019-06-17 18:35:28 (18711): Setting Chipset Options for VM.
2019-06-17 18:35:28 (18711): Setting Boot Options for VM.
2019-06-17 18:35:29 (18711): Setting Network Configuration for NAT.
2019-06-17 18:35:29 (18711): Enabling VM Network Access.
2019-06-17 18:35:29 (18711): Disabling USB Support for VM.
2019-06-17 18:35:29 (18711): Disabling COM Port Support for VM.
2019-06-17 18:35:29 (18711): Disabling LPT Port Support for VM.
2019-06-17 18:35:29 (18711): Disabling Audio Support for VM.
2019-06-17 18:35:29 (18711): Disabling Clipboard Support for VM.
2019-06-17 18:35:30 (18711): Disabling Drag and Drop Support for VM.
2019-06-17 18:35:30 (18711): Adding storage controller(s) to VM.
2019-06-17 18:35:30 (18711): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2019-06-17 18:35:30 (18711): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-06-17 18:35:30 (18711): Enabling shared directory for VM.
2019-06-17 18:35:31 (18711): Starting VM. (boinc_5ecefb46fce0fb7e, slot#1)
2019-06-17 18:35:32 (18711): Successfully started VM. (PID = '19384')
2019-06-17 18:35:32 (18711): Reporting VM Process ID to BOINC.
2019-06-17 18:35:32 (18711): Guest Log: BIOS: VirtualBox 5.2.18
2019-06-17 18:35:32 (18711): Guest Log: CPUID EDX: 0x078bfbff
2019-06-17 18:35:32 (18711): VM state change detected. (old = 'poweroff', new = 'running')
2019-06-17 18:35:32 (18711): Preference change detected
2019-06-17 18:35:32 (18711): Setting CPU throttle for VM. (100%)
2019-06-17 18:35:33 (18711): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2019-06-17 18:35:34 (18711): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-06-17 18:35:34 (18711): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2019-06-17 18:35:34 (18711): Guest Log: BIOS: Boot from Hard Disk 0 failed
2019-06-17 18:35:34 (18711): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2019-06-17 18:35:34 (18711): Guest Log: BIOS: Booting from CD-ROM...
2019-06-17 18:35:35 (18711): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-06-17 18:35:35 (18711): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000
2019-06-17 18:35:45 (18711): Guest Log: net.ipv4.ip_forward = 1
2019-06-17 18:35:45 (18711): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2019-06-17 18:35:45 (18711): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-06-17 18:35:45 (18711): Guest Log: sysctl: "cannot stat %s" is an unknown key
2019-06-17 18:35:45 (18711): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-06-17 18:35:45 (18711): Guest Log: Segmentation fault
2019-06-17 18:35:45 (18711): Guest Log: automount ...
2019-06-17 18:35:45 (18711): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2019-06-17 18:35:45 (18711): Guest Log: automount over.
2019-06-17 18:35:45 (18711): Guest Log: [1;32mSetting hostname to [1;35mboot2docker[0;39m [1;32mDone.[0;39m
2019-06-17 18:35:45 (18711): Guest Log: Mon Jun 17 18:35:43 UTC 2019 dhcp -------------------------------
2019-06-17 18:35:45 (18711): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-06-17 18:35:45 (18711): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-06-17 18:35:50 (18711): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1055)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00 (1268)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXCPU:00 (1269)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00 (1270)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0 (1271)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0/event0 (1272)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00 (1273)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1 (1274)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1/event1 (1275)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00 (1276)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00 (1277)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00 (1278)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00/power_supply/AC (1279)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00 (1280)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/device:01 (1281)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6 (1282)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6/event5 (1283)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1284)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1285)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1286)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1287)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1288)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1289)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1290)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1291)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1292)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00 (1293)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1294)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1295)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1296)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1297)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1298)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1299)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1300)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1301)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1302)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:02 (1303)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1304)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1305)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1306)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1307)
2019-06-17 18:35:50 (18711): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:01 (1308)
2019-06-17 18:35:51 (18711): Guest Log: Mon Jun 17 18:35:49 UTC 2019 dhcp -------------------------------
2019-06-17 18:35:51 (18711): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log
2019-06-17 18:35:51 (18711): Guest Log: 00:00:00.000132 main Log opened 2019-06-17T18:35:49.682286000Z
2019-06-17 18:35:51 (18711): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log
2019-06-17 18:35:51 (18711): Guest Log: 00:00:00.000132 main Log opened 2019-06-17T18:35:49.682286000Z
2019-06-17 18:35:51 (18711): Guest Log: 00:00:00.001931 main OS Product: Linux
2019-06-17 18:35:51 (18711): Guest Log: 00:00:00.001931 main OS Product: Linux
2019-06-17 18:35:51 (18711): Guest Log: 00:00:00.002506 main OS Release: 4.1.19-boot2docker
2019-06-17 18:35:51 (18711): Guest Log: 00:00:00.002506 main OS Release: 4.1.19-boot2docker
2019-06-17 18:35:51 (18711): Guest Log: 00:00:00.003138 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-06-17 18:35:51 (18711): Guest Log: 00:00:00.003138 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-06-17 18:35:51 (18711): Guest Log: 00:00:00.003893 main Executable: /sbin/VBoxService
2019-06-17 18:35:51 (18711): Guest Log: 00:00:00.003898 main Process ID: 789
2019-06-17 18:35:51 (18711): Guest Log: 00:00:00.003899 main Package type: LINUX_64BITS_GENERIC
2019-06-17 18:35:51 (18711): Guest Log: 00:00:00.003893 main Executable: /sbin/VBoxService
2019-06-17 18:35:51 (18711): Guest Log: 00:00:00.003898 main Process ID: 789
2019-06-17 18:35:51 (18711): Guest Log: 00:00:00.003899 main Package type: LINUX_64BITS_GENERIC
2019-06-17 18:35:51 (18711): Guest Log: 00:00:00.030546 main 5.0.16 r105871 started. Verbose level = 0
2019-06-17 18:35:51 (18711): Guest Log: 00:00:00.030546 main 5.0.16 r105871 started. Verbose level = 0
2019-06-17 18:35:51 (18711): Guest Log: 00:00:00.036744 vminfo rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2019-06-17 18:35:51 (18711): Guest Log: 00:00:00.036818 vminfo Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2019-06-17 18:35:51 (18711): Guest Log: Mounting BOINC shared/...
2019-06-17 18:35:51 (18711): Guest Log: -------------------
2019-06-17 18:35:51 (18711): Guest Log: Mon Jun 17 23:35:51 UTC 2019
2019-06-17 18:35:56 (18711): Guest Log: 00:00:05.038203 vminfo Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2019-06-17 18:35:56 (18711): Guest Log: Mon Jun 17 23:35:56 UTC 2019
2019-06-17 18:35:56 (18711): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default
2019-06-17 18:35:56 (18711): Guest Log: link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2019-06-17 18:35:56 (18711): Guest Log: inet 127.0.0.1/8 scope host lo
2019-06-17 18:35:56 (18711): Guest Log: valid_lft forever preferred_lft forever
2019-06-17 18:35:56 (18711): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default
2019-06-17 18:35:56 (18711): Guest Log: link/ether 6a:2e:da:68:c8:d0 brd ff:ff:ff:ff:ff:ff
2019-06-17 18:35:56 (18711): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2019-06-17 18:35:56 (18711): Guest Log: link/ether 08:00:27:61:cd:d2 brd ff:ff:ff:ff:ff:ff
2019-06-17 18:35:56 (18711): Guest Log: inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2019-06-17 18:35:56 (18711): Guest Log: valid_lft forever preferred_lft forever
2019-06-17 18:35:56 (18711): Guest Log: -------------------
2019-06-17 18:35:56 (18711): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2019-06-17 18:35:56 (18711): Guest Log: Waiting for Docker daemon to start...
2019-06-17 18:35:58 (18711): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE
2019-06-17 18:35:58 (18711): Guest Log: Running boinc_app...
2019-06-17 18:35:58 (18711): Guest Log: Importing Docker image from BOINC...
2019-06-17 18:35:58 (18711): Guest Log: Filesystem Size Used Available Use% Mounted on
2019-06-17 18:35:58 (18711): Guest Log: tmpfs 2.6G 164.2M 2.5G 6% /
2019-06-17 18:35:58 (18711): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2019-06-17 18:35:58 (18711): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2019-06-17 18:35:58 (18711): Guest Log: shared 227.7G 28.0G 199.8G 12% /root/shared
2019-06-17 18:35:58 (18711): Guest Log: tmpfs 2.6G 164.2M 2.5G 6% /var/lib/docker/aufs
2019-06-17 18:36:02 (18711): Guest Log: 00:00:10.042143 vminfo Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2019-06-17 18:36:08 (18711): Guest Log: doing docker load...
2019-06-17 18:36:25 (18711): Guest Log: Filesystem Size Used Available Use% Mounted on
2019-06-17 18:36:25 (18711): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /
2019-06-17 18:36:25 (18711): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2019-06-17 18:36:25 (18711): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2019-06-17 18:36:25 (18711): Guest Log: shared 227.7G 27.5G 200.2G 12% /root/shared
2019-06-17 18:36:25 (18711): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /var/lib/docker/aufs
2019-06-17 18:36:25 (18711): Guest Log: total used free shared buff/cache available
2019-06-17 18:36:25 (18711): Guest Log: Mem: 3007 50 2255 663 701 2255
2019-06-17 18:36:25 (18711): Guest Log: Swap: 701 0 701
2019-06-17 18:36:25 (18711): Guest Log: Building apps directory...
2019-06-17 18:37:25 (18711): Guest Log: Prerun diagnostics...
2019-06-17 18:37:25 (18711): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE
2019-06-17 18:37:25 (18711): Guest Log: nanohub_apps_share64_matlab 4 32c863520615 18 months ago 488.2 MB
2019-06-17 18:37:25 (18711): Guest Log: CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
2019-06-17 18:37:25 (18711): Guest Log: 499.0M /var/lib/docker
2019-06-17 18:37:25 (18711): Guest Log: total used free shared buff/cache available
2019-06-17 18:37:25 (18711): Guest Log: Mem: 3007 53 2240 663 713 2250
2019-06-17 18:37:25 (18711): Guest Log: Swap: 701 0 701
2019-06-17 18:37:25 (18711): Guest Log: Filesystem Size Used Available Use% Mounted on
2019-06-17 18:37:25 (18711): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /
2019-06-17 18:37:25 (18711): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2019-06-17 18:37:25 (18711): Guest Log: Running...
2019-06-17 18:37:25 (18711): Guest Log: 07252478_02.boinc
2019-06-17 18:37:25 (18711): Guest Log: 07252478_02.sh
2019-06-17 20:15:31 (18711): Status Report: Elapsed Time: '6001.068056'
2019-06-17 20:15:31 (18711): Status Report: CPU Time: '5737.450000'
2019-06-17 21:55:34 (18711): Status Report: Elapsed Time: '12003.783690'
2019-06-17 21:55:34 (18711): Status Report: CPU Time: '11519.850000'
2019-06-17 22:23:11 (18711): Powering off VM.
2019-06-17 22:23:23 (18711): Successfully stopped VM.
2019-06-17 22:23:23 (18711): Deregistering VM. (boinc_5ecefb46fce0fb7e, slot#1)
2019-06-17 22:23:24 (18711): Removing network bandwidth throttle group from VM.
2019-06-17 22:24:07 (18711): Removing storage controller(s) from VM.
2019-06-17 22:24:08 (18711): Removing VM from VirtualBox.
2019-06-17 22:24:08 (18711): Removing virtual ISO 9660 disk from VirtualBox.
</stderr_txt>
]]>
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