Task 292119
| Name | 06910380_04_3 |
| Workunit | 184870 |
| Created | 15 Nov 2018, 5:18:18 UTC |
| Sent | 15 Nov 2018, 5:18:26 UTC |
| Report deadline | 15 Nov 2018, 13:18:26 UTC |
| Received | 15 Nov 2018, 15:14:17 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 501 |
| Run time | 4 hours 13 min 47 sec |
| CPU time | 3 hours 36 min 26 sec |
| Validate state | Valid |
| Credit | 30.17 |
| Device peak FLOPS | 4.13 GFLOPS |
| Application version | boinc2docker v1.11 (vbox64_mt) x86_64-pc-linux-gnu |
| Peak working set size | 110.91 MB |
| Peak swap size | 3.90 GB |
| Peak disk usage | 731.76 MB |
Stderr output
<core_client_version>7.10.2</core_client_version>
<![CDATA[
<stderr_txt>
2018-11-15 12:00:19 (7436): vboxwrapper (7.7.26197): starting
2018-11-15 12:00:20 (7436): Feature: Checkpoint interval offset (537 seconds)
2018-11-15 12:00:20 (7436): Detected: VirtualBox VboxManage Interface (Version: 5.2.22)
2018-11-15 12:00:20 (7436): Detected: Minimum checkpoint interval (600.000000 seconds)
2018-11-15 12:00:21 (7436): Create VM. (boinc_83b4194d32cf4552, slot#10)
2018-11-15 12:00:21 (7436): Updating drive controller type and model for desired configuration.
2018-11-15 12:00:22 (7436): Setting Memory Size for VM. (3072MB)
2018-11-15 12:00:23 (7436): Setting CPU Count for VM. (1)
2018-11-15 12:00:23 (7436): Setting Chipset Options for VM.
2018-11-15 12:00:24 (7436): Setting Boot Options for VM.
2018-11-15 12:00:24 (7436): Setting Network Configuration for NAT.
2018-11-15 12:00:25 (7436): Enabling VM Network Access.
2018-11-15 12:00:25 (7436): Disabling USB Support for VM.
2018-11-15 12:00:26 (7436): Disabling COM Port Support for VM.
2018-11-15 12:00:26 (7436): Disabling LPT Port Support for VM.
2018-11-15 12:00:27 (7436): Disabling Audio Support for VM.
2018-11-15 12:00:27 (7436): Disabling Clipboard Support for VM.
2018-11-15 12:00:28 (7436): Disabling Drag and Drop Support for VM.
2018-11-15 12:00:28 (7436): Adding storage controller(s) to VM.
2018-11-15 12:00:29 (7436): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2018-11-15 12:00:29 (7436): Adding VirtualBox Guest Additions to VM.
2018-11-15 12:00:30 (7436): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2018-11-15 12:00:30 (7436): Enabling shared directory for VM.
2018-11-15 12:00:33 (7436): Starting VM. (boinc_83b4194d32cf4552, slot#10)
2018-11-15 12:00:37 (7436): Successfully started VM. (PID = '8446')
2018-11-15 12:00:37 (7436): Reporting VM Process ID to BOINC.
2018-11-15 12:00:39 (7436): Guest Log: BIOS: VirtualBox 5.2.22
2018-11-15 12:00:39 (7436): Guest Log: CPUID EDX: 0x078bfbff
2018-11-15 12:00:39 (7436): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2018-11-15 12:00:39 (7436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2018-11-15 12:00:39 (7436): Guest Log: BIOS: Boot from Hard Disk 0 failed
2018-11-15 12:00:39 (7436): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2018-11-15 12:00:39 (7436): Guest Log: BIOS: Booting from CD-ROM...
2018-11-15 12:00:42 (7436): VM state change detected. (old = 'poweroff', new = 'running')
2018-11-15 12:00:45 (7436): Preference change detected
2018-11-15 12:00:45 (7436): Setting CPU throttle for VM. (100%)
2018-11-15 12:00:46 (7436): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2018-11-15 12:00:48 (7436): Guest Log: BIOS: KBD: unsupported int 16h function 03
2018-11-15 12:00:48 (7436): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000
2018-11-15 12:01:01 (7436): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2018-11-15 12:01:01 (7436): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2018-11-15 12:01:03 (7436): Guest Log: net.ipv4.ip_forward = 1
2018-11-15 12:01:03 (7436): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2018-11-15 12:01:03 (7436): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-11-15 12:01:03 (7436): Guest Log: sysctl: "cannot stat %s" is an unknown key
2018-11-15 12:01:03 (7436): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-11-15 12:01:03 (7436): Guest Log: Segmentation fault
2018-11-15 12:01:03 (7436): Guest Log: automount ...
2018-11-15 12:01:03 (7436): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2018-11-15 12:01:03 (7436): Guest Log: automount over.
2018-11-15 12:01:03 (7436): Guest Log: [1;32mSetting hostname to [1;35mboot2docker[0;39m [1;32mDone.[0;39m
2018-11-15 12:01:03 (7436): Guest Log: Thu Nov 15 12:01:01 UTC 2018 dhcp -------------------------------
2018-11-15 12:01:09 (7436): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1079)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00 (1304)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXCPU:00 (1305)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00 (1306)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0 (1307)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0/event0 (1308)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00 (1309)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1 (1310)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1/event1 (1311)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00 (1312)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00 (1313)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00 (1314)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00/power_supply/AC (1315)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00 (1316)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/device:01 (1317)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input7 (1318)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input7/event6 (1319)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1320)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1321)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1322)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1323)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1324)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1325)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1326)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1327)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1328)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00 (1329)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1330)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1331)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1332)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1333)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1334)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1335)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1336)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1337)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1338)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:02 (1339)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1340)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1341)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1342)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1343)
2018-11-15 12:01:09 (7436): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:01 (1344)
2018-11-15 12:01:09 (7436): Guest Log: Thu Nov 15 12:01:07 UTC 2018 dhcp -------------------------------
2018-11-15 12:01:09 (7436): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log
2018-11-15 12:01:09 (7436): Guest Log: 00:00:00.000125 main Log opened 2018-11-15T12:01:07.589232000Z
2018-11-15 12:01:09 (7436): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log
2018-11-15 12:01:09 (7436): Guest Log: 00:00:00.000125 main Log opened 2018-11-15T12:01:07.589232000Z
2018-11-15 12:01:09 (7436): Guest Log: 00:00:00.003071 main OS Product: Linux
2018-11-15 12:01:09 (7436): Guest Log: 00:00:00.003071 main OS Product: Linux
2018-11-15 12:01:09 (7436): Guest Log: 00:00:00.020528 main OS Release: 4.1.19-boot2docker
2018-11-15 12:01:09 (7436): Guest Log: 00:00:00.020630 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-11-15 12:01:09 (7436): Guest Log: 00:00:00.020671 main Executable: /sbin/VBoxService
2018-11-15 12:01:09 (7436): Guest Log: 00:00:00.020672 main Process ID: 833
2018-11-15 12:01:09 (7436): Guest Log: 00:00:00.020673 main Package type: LINUX_64BITS_GENERIC
2018-11-15 12:01:09 (7436): Guest Log: 00:00:00.020528 main OS Release: 4.1.19-boot2docker
2018-11-15 12:01:09 (7436): Guest Log: 00:00:00.020630 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-11-15 12:01:09 (7436): Guest Log: 00:00:00.020671 main Executable: /sbin/VBoxService
2018-11-15 12:01:09 (7436): Guest Log: 00:00:00.020672 main Process ID: 833
2018-11-15 12:01:09 (7436): Guest Log: 00:00:00.020673 main Package type: LINUX_64BITS_GENERIC
2018-11-15 12:01:09 (7436): Guest Log: 00:00:00.061338 main 5.0.16 r105871 started. Verbose level = 0
2018-11-15 12:01:09 (7436): Guest Log: 00:00:00.061338 main 5.0.16 r105871 started. Verbose level = 0
2018-11-15 12:01:09 (7436): Guest Log: 00:00:00.071981 vminfo rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2018-11-15 12:01:09 (7436): Guest Log: 00:00:00.072050 vminfo Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2018-11-15 12:01:09 (7436): Guest Log: Mounting BOINC shared/...
2018-11-15 12:01:09 (7436): Guest Log: -------------------
2018-11-15 12:01:09 (7436): Guest Log: Thu Nov 15 11:01:09 UTC 2018
2018-11-15 12:01:15 (7436): Guest Log: 00:00:05.076013 vminfo Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2018-11-15 12:01:15 (7436): Guest Log: Thu Nov 15 11:01:14 UTC 2018
2018-11-15 12:01:15 (7436): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default
2018-11-15 12:01:15 (7436): Guest Log: link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2018-11-15 12:01:15 (7436): Guest Log: inet 127.0.0.1/8 scope host lo
2018-11-15 12:01:15 (7436): Guest Log: valid_lft forever preferred_lft forever
2018-11-15 12:01:15 (7436): Guest Log: inet6 ::1/128 scope host
2018-11-15 12:01:15 (7436): Guest Log: valid_lft forever preferred_lft forever
2018-11-15 12:01:15 (7436): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default
2018-11-15 12:01:15 (7436): Guest Log: link/ether 1e:c9:bb:57:27:bb brd ff:ff:ff:ff:ff:ff
2018-11-15 12:01:15 (7436): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2018-11-15 12:01:15 (7436): Guest Log: link/ether 08:00:27:0f:9f:9d brd ff:ff:ff:ff:ff:ff
2018-11-15 12:01:15 (7436): Guest Log: inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2018-11-15 12:01:15 (7436): Guest Log: valid_lft forever preferred_lft forever
2018-11-15 12:01:15 (7436): Guest Log: inet6 fe80::a00:27ff:fe0f:9f9d/64 scope link
2018-11-15 12:01:15 (7436): Guest Log: valid_lft forever preferred_lft forever
2018-11-15 12:01:15 (7436): Guest Log: -------------------
2018-11-15 12:01:15 (7436): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2018-11-15 12:01:15 (7436): Guest Log: Waiting for Docker daemon to start...
2018-11-15 12:01:18 (7436): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE
2018-11-15 12:01:18 (7436): Guest Log: Running boinc_app...
2018-11-15 12:01:18 (7436): Guest Log: Importing Docker image from BOINC...
2018-11-15 12:01:18 (7436): Guest Log: Filesystem Size Used Available Use% Mounted on
2018-11-15 12:01:18 (7436): Guest Log: tmpfs 2.6G 164.2M 2.5G 6% /
2018-11-15 12:01:18 (7436): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2018-11-15 12:01:18 (7436): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2018-11-15 12:01:18 (7436): Guest Log: shared 437.2G 43.8G 393.5G 10% /root/shared
2018-11-15 12:01:18 (7436): Guest Log: tmpfs 2.6G 164.2M 2.5G 6% /var/lib/docker/aufs
2018-11-15 12:01:20 (7436): Guest Log: 00:00:10.078083 vminfo Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2018-11-15 12:01:32 (7436): Guest Log: doing docker load...
2018-11-15 12:01:45 (7436): Guest Log: Filesystem Size Used Available Use% Mounted on
2018-11-15 12:01:45 (7436): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /
2018-11-15 12:01:45 (7436): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2018-11-15 12:01:45 (7436): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2018-11-15 12:01:45 (7436): Guest Log: shared 437.2G 43.6G 393.6G 10% /root/shared
2018-11-15 12:01:45 (7436): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /var/lib/docker/aufs
2018-11-15 12:01:45 (7436): Guest Log: total used free shared buff/cache available
2018-11-15 12:01:45 (7436): Guest Log: Mem: 3007 49 2256 663 701 2256
2018-11-15 12:01:45 (7436): Guest Log: Swap: 703 0 703
2018-11-15 12:01:45 (7436): Guest Log: Building apps directory...
2018-11-15 12:03:13 (7436): Guest Log: Prerun diagnostics...
2018-11-15 12:03:13 (7436): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE
2018-11-15 12:03:13 (7436): Guest Log: nanohub_apps_share64_matlab 4 32c863520615 11 months ago 488.2 MB
2018-11-15 12:03:13 (7436): Guest Log: CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
2018-11-15 12:03:13 (7436): Guest Log: 499.0M /var/lib/docker
2018-11-15 12:03:13 (7436): Guest Log: total used free shared buff/cache available
2018-11-15 12:03:13 (7436): Guest Log: Mem: 3007 53 2240 663 713 2250
2018-11-15 12:03:13 (7436): Guest Log: Swap: 703 0 703
2018-11-15 12:03:13 (7436): Guest Log: Filesystem Size Used Available Use% Mounted on
2018-11-15 12:03:13 (7436): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /
2018-11-15 12:03:13 (7436): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2018-11-15 12:03:13 (7436): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2018-11-15 12:03:13 (7436): Guest Log: shared 437.2G 44.0G 393.2G 10% /root/shared
2018-11-15 12:03:13 (7436): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /var/lib/docker/aufs
2018-11-15 12:03:13 (7436): Guest Log: Running...
2018-11-15 12:03:13 (7436): Guest Log: 06910380_04.boinc
2018-11-15 12:03:13 (7436): Guest Log: 06910380_04.sh
2018-11-15 13:40:45 (7436): Status Report: Elapsed Time: '6000.748817'
2018-11-15 13:40:45 (7436): Status Report: CPU Time: '4329.340000'
2018-11-15 15:20:46 (7436): Status Report: Elapsed Time: '12001.648285'
2018-11-15 15:20:46 (7436): Status Report: CPU Time: '9926.840000'
2018-11-15 16:13:58 (7436): Guest Log: boinc_app exited (0)
2018-11-15 16:13:58 (7436): Guest Log: Saving results...
2018-11-15 16:13:58 (7436): Guest Log: 06910380_04_output.tar.gz
2018-11-15 16:13:58 (7436): VM Completion File Detected.
2018-11-15 16:13:58 (7436): Powering off VM.
2018-11-15 16:13:58 (7436): Successfully stopped VM.
2018-11-15 16:13:58 (7436): Deregistering VM. (boinc_83b4194d32cf4552, slot#10)
2018-11-15 16:13:59 (7436): Removing network bandwidth throttle group from VM.
2018-11-15 16:13:59 (7436): Removing storage controller(s) from VM.
2018-11-15 16:13:59 (7436): Removing VM from VirtualBox.
2018-11-15 16:13:59 (7436): Removing virtual ISO 9660 disk from VirtualBox.
16:14:04 (7436): called boinc_finish(0)
</stderr_txt>
]]>
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