Task 3184347

Name 07266396_111_0
Workunit 2463298
Created 25 Jun 2019, 18:04:33 UTC
Sent 26 Jun 2019, 3:52:21 UTC
Report deadline 1 Jul 2019, 3:52:21 UTC
Received 26 Jun 2019, 12:42:44 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 194 (0x000000C2) EXIT_ABORTED_BY_CLIENT
Computer ID 2331
Run time 1 min 58 sec
CPU time 2 min 4 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 2.86 GFLOPS
Application version boinc2docker v1.12 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 1.90 GB
Peak swap size 3.71 GB
Peak disk usage 1.13 GB

Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<message>
finish file present too long</message>
<stderr_txt>
2019-06-26 07:31:11 (10305): vboxwrapper (7.7.26197): starting
2019-06-26 07:31:11 (10305): Feature: Checkpoint interval offset (51 seconds)
2019-06-26 07:31:11 (10305): Detected: VirtualBox VboxManage Interface (Version: 5.2.18)
2019-06-26 07:31:11 (10305): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-06-26 07:31:12 (10305): Create VM. (boinc_334a8831b14733b2, slot#0)
2019-06-26 07:31:12 (10305): Updating drive controller type and model for desired configuration.
2019-06-26 07:31:12 (10305): Setting Memory Size for VM. (3072MB)
2019-06-26 07:31:13 (10305): Setting CPU Count for VM. (1)
2019-06-26 07:31:13 (10305): Setting Chipset Options for VM.
2019-06-26 07:31:13 (10305): Setting Boot Options for VM.
2019-06-26 07:31:13 (10305): Setting Network Configuration for NAT.
2019-06-26 07:31:14 (10305): Enabling VM Network Access.
2019-06-26 07:31:14 (10305): Disabling USB Support for VM.
2019-06-26 07:31:14 (10305): Disabling COM Port Support for VM.
2019-06-26 07:31:14 (10305): Disabling LPT Port Support for VM.
2019-06-26 07:31:15 (10305): Disabling Audio Support for VM.
2019-06-26 07:31:15 (10305): Disabling Clipboard Support for VM.
2019-06-26 07:31:15 (10305): Disabling Drag and Drop Support for VM.
2019-06-26 07:31:15 (10305): Adding storage controller(s) to VM.
2019-06-26 07:31:16 (10305): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2019-06-26 07:31:16 (10305): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-06-26 07:31:16 (10305): Enabling shared directory for VM.
2019-06-26 07:31:16 (10305): Starting VM. (boinc_334a8831b14733b2, slot#0)
2019-06-26 07:31:17 (10305): Successfully started VM. (PID = '11356')
2019-06-26 07:31:17 (10305): Reporting VM Process ID to BOINC.
2019-06-26 07:31:17 (10305): Guest Log: BIOS: VirtualBox 5.2.18
2019-06-26 07:31:17 (10305): Guest Log: CPUID EDX: 0x078bfbff
2019-06-26 07:31:18 (10305): VM state change detected. (old = 'poweroff', new = 'running')
2019-06-26 07:31:18 (10305): Preference change detected
2019-06-26 07:31:18 (10305): Setting CPU throttle for VM. (100%)
2019-06-26 07:31:18 (10305): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2019-06-26 07:31:20 (10305): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-06-26 07:31:20 (10305): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2019-06-26 07:31:20 (10305): Guest Log: BIOS: Boot from Hard Disk 0 failed
2019-06-26 07:31:20 (10305): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2019-06-26 07:31:20 (10305): Guest Log: BIOS: Booting from CD-ROM...
2019-06-26 07:31:24 (10305): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-06-26 07:31:24 (10305): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2019-06-26 07:31:33 (10305): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-06-26 07:31:33 (10305): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-06-26 07:32:19 (10305): Guest Log: net.ipv4.ip_forward = 1
2019-06-26 07:32:19 (10305): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-06-26 07:32:19 (10305): Guest Log: sysctl: "cannot stat %s" is an unknown key
2019-06-26 07:32:19 (10305): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-06-26 07:32:19 (10305): Guest Log: Segmentation fault
2019-06-26 07:32:19 (10305): Guest Log: automount ...
2019-06-26 07:32:19 (10305): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2019-06-26 07:32:19 (10305): Guest Log: automount over.
2019-06-26 07:32:19 (10305): Guest Log: Setting hostname to boot2docker Done.
2019-06-26 07:32:19 (10305): Guest Log: Wed Jun 26 07:32:16 UTC 2019 dhcp -------------------------------
2019-06-26 07:32:25 (10305): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2019-06-26 07:32:25 (10305): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1318)
2019-06-26 07:32:26 (10305): Guest Log: Wed Jun 26 07:32:22 UTC 2019 dhcp -------------------------------
2019-06-26 07:32:26 (10305): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-06-26 07:32:26 (10305): Guest Log: 00:00:00.000092 main     Log opened 2019-06-26T07:32:22.924208000Z
2019-06-26 07:32:26 (10305): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-06-26 07:32:26 (10305): Guest Log: 00:00:00.000092 main     Log opened 2019-06-26T07:32:22.924208000Z
2019-06-26 07:32:26 (10305): Guest Log: 00:00:00.002579 main     OS Product: Linux
2019-06-26 07:32:26 (10305): Guest Log: 00:00:00.002579 main     OS Product: Linux
2019-06-26 07:32:26 (10305): Guest Log: 00:00:00.003435 main     OS Release: 4.1.19-boot2docker
2019-06-26 07:32:26 (10305): Guest Log: 00:00:00.003474 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-06-26 07:32:26 (10305): Guest Log: 00:00:00.003503 main     Executable: /sbin/VBoxService
2019-06-26 07:32:26 (10305): Guest Log: 00:00:00.003508 main     Process ID: 785
2019-06-26 07:32:26 (10305): Guest Log: 00:00:00.003509 main     Package type: LINUX_64BITS_GENERIC
2019-06-26 07:32:26 (10305): Guest Log: 00:00:00.003435 main     OS Release: 4.1.19-boot2docker
2019-06-26 07:32:26 (10305): Guest Log: 00:00:00.003474 main     OS Version: #1 SMP Sun Ap00:00:00.005244 main     5.0.16 r105871 started. Verbose level = 0
2019-06-26 07:32:26 (10305): Guest Log: r 17 19:40:54 UTC 2016
2019-06-26 07:32:26 (10305): Guest Log: 00:00:00.003503 main     Executable: /sbin/VBoxService
2019-06-26 07:32:26 (10305): Guest Log: 00:00:00.003508 main     Process ID: 785
2019-06-26 07:32:26 (10305): Guest Log: 00:00:00.003509 main     Package type: LINUX_64BITS_GENERIC
2019-06-26 07:32:26 (10305): Guest Log: 00:00:00.005244 main     5.0.16 r105871 started. Verbose level = 0
2019-06-26 07:32:26 (10305): Guest Log: 00:00:00.012583 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2019-06-26 07:32:26 (10305): Guest Log: 00:00:00.012636 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2019-06-26 07:32:26 (10305): Guest Log: Mounting BOINC shared/...
2019-06-26 07:32:26 (10305): Guest Log: -------------------
2019-06-26 07:32:26 (10305): Guest Log: Wed Jun 26 12:32:25 UTC 2019
2019-06-26 07:32:31 (10305): Guest Log: 00:00:05.013337 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2019-06-26 07:32:31 (10305): Guest Log: Wed Jun 26 12:32:30 UTC 2019
2019-06-26 07:32:31 (10305): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2019-06-26 07:32:31 (10305): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2019-06-26 07:32:31 (10305): Guest Log:     inet 127.0.0.1/8 scope host lo
2019-06-26 07:32:31 (10305): Guest Log:        valid_lft forever preferred_lft forever
2019-06-26 07:32:31 (10305): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2019-06-26 07:32:31 (10305): Guest Log:     link/ether 4e:cf:30:57:6b:62 brd ff:ff:ff:ff:ff:ff
2019-06-26 07:32:31 (10305): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2019-06-26 07:32:31 (10305): Guest Log:     link/ether 08:00:27:05:8c:5f brd ff:ff:ff:ff:ff:ff
2019-06-26 07:32:31 (10305): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2019-06-26 07:32:31 (10305): Guest Log:        valid_lft forever preferred_lft forever
2019-06-26 07:32:31 (10305): Guest Log: -------------------
2019-06-26 07:32:31 (10305): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2019-06-26 07:32:31 (10305): Guest Log: Waiting for Docker daemon to start...
2019-06-26 07:32:32 (10305): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2019-06-26 07:32:32 (10305): Guest Log: Running boinc_app...
2019-06-26 07:32:32 (10305): Guest Log: Importing Docker image from BOINC...
2019-06-26 07:32:32 (10305): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-06-26 07:32:32 (10305): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /
2019-06-26 07:32:32 (10305): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-06-26 07:32:32 (10305): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-06-26 07:32:32 (10305): Guest Log: shared                  109.5G     21.7G     87.9G  20% /root/shared
2019-06-26 07:32:32 (10305): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /var/lib/docker/aufs
2019-06-26 07:32:36 (10305): Guest Log: 00:00:10.014265 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2019-06-26 07:32:43 (10305): Guest Log: doing docker load...
2019-06-26 07:33:12 (10305): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-06-26 07:33:12 (10305): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2019-06-26 07:33:12 (10305): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-06-26 07:33:12 (10305): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-06-26 07:33:12 (10305): Guest Log: shared                  109.5G     21.2G     88.3G  19% /root/shared
2019-06-26 07:33:12 (10305): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /var/lib/docker/aufs
2019-06-26 07:33:12 (10305): Guest Log:               total        used        free      shared  buff/cache   available
2019-06-26 07:33:12 (10305): Guest Log: Mem:           3007          48        2257         663         701        2257
2019-06-26 07:33:12 (10305): Guest Log: Swap:           700           0         700
2019-06-26 07:33:12 (10305): Guest Log: Building apps directory...
2019-06-26 07:37:50 (10305): Guest Log: Prerun diagnostics...
2019-06-26 07:37:50 (10305): Guest Log: REPOSITORY                    TAG                 IMAGE ID            CREATED             SIZE
2019-06-26 07:37:50 (10305): Guest Log: nanohub_apps_share64_matlab   4                   32c863520615        18 months ago       488.2 MB
2019-06-26 07:37:50 (10305): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2019-06-26 07:37:50 (10305): Guest Log: 499.0M	/var/lib/docker
2019-06-26 07:37:50 (10305): Guest Log:               total        used        free      shared  buff/cache   available
2019-06-26 07:37:50 (10305): Guest Log: Mem:           3007          52        2241         663         713        2251
2019-06-26 07:37:50 (10305): Guest Log: Swap:           700           0         700
2019-06-26 07:37:50 (10305): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-06-26 07:37:50 (10305): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2019-06-26 07:37:50 (10305): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-06-26 07:37:50 (10305): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-06-26 07:37:50 (10305): Guest Log: shared                  109.5G     24.2G     85.3G  22% /root/shared
2019-06-26 07:37:50 (10305): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /var/lib/docker/aufs
2019-06-26 07:37:50 (10305): Guest Log: Running... 
2019-06-26 07:37:51 (10305): Guest Log: 07266396_111.boinc
2019-06-26 07:37:51 (10305): Guest Log: 07266396_111.sh
2019-06-26 07:38:11 (10305): Guest Log: boinc_app exited (0)
2019-06-26 07:38:11 (10305): Guest Log: Saving results...
2019-06-26 07:38:11 (10305): Guest Log: 07266396_111_output.tar.gz
2019-06-26 07:38:11 (10305): VM Completion File Detected.
2019-06-26 07:38:11 (10305): Powering off VM.
2019-06-26 07:38:13 (10305): Successfully stopped VM.
2019-06-26 07:38:13 (10305): Deregistering VM. (boinc_334a8831b14733b2, slot#0)
2019-06-26 07:38:13 (10305): Removing network bandwidth throttle group from VM.
2019-06-26 07:38:13 (10305): Removing storage controller(s) from VM.
2019-06-26 07:38:14 (10305): Removing VM from VirtualBox.
2019-06-26 07:38:14 (10305): Removing virtual ISO 9660 disk from VirtualBox.
07:38:19 (10305): called boinc_finish(0)

</stderr_txt>
]]>


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