Task 4195115
| Name | 07442347_03_2 |
| Workunit | 3352407 |
| Created | 1 Aug 2019, 20:16:01 UTC |
| Sent | 1 Aug 2019, 20:16:06 UTC |
| Report deadline | 6 Aug 2019, 20:16:06 UTC |
| Received | 2 Aug 2019, 1:11:33 UTC |
| Server state | Over |
| Outcome | Computation error |
| Client state | Compute error |
| Exit status | 0 (0x00000000) |
| Computer ID | 2101 |
| Run time | 17 min 7 sec |
| CPU time | 15 min 36 sec |
| Validate state | Invalid |
| Credit | 0.00 |
| Device peak FLOPS | 3.34 GFLOPS |
| Application version | boinc2docker v1.12 (vbox64_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.90 GB |
| Peak swap size | 4.98 GB |
| Peak disk usage | 1.05 GB |
Stderr output
<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
2019-08-01 19:36:25 (5901): vboxwrapper (7.7.26197): starting
2019-08-01 19:36:25 (5901): Feature: Checkpoint interval offset (167 seconds)
2019-08-01 19:36:25 (5901): Detected: VirtualBox VboxManage Interface (Version: 5.2.18)
2019-08-01 19:36:25 (5901): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-08-01 19:36:25 (5901): Create VM. (boinc_54f4f25451af35f0, slot#6)
2019-08-01 19:36:25 (5901): Updating drive controller type and model for desired configuration.
2019-08-01 19:36:26 (5901): Setting Memory Size for VM. (3072MB)
2019-08-01 19:36:26 (5901): Setting CPU Count for VM. (1)
2019-08-01 19:36:26 (5901): Setting Chipset Options for VM.
2019-08-01 19:36:26 (5901): Setting Boot Options for VM.
2019-08-01 19:36:26 (5901): Setting Network Configuration for NAT.
2019-08-01 19:36:26 (5901): Enabling VM Network Access.
2019-08-01 19:36:26 (5901): Disabling USB Support for VM.
2019-08-01 19:36:27 (5901): Disabling COM Port Support for VM.
2019-08-01 19:36:27 (5901): Disabling LPT Port Support for VM.
2019-08-01 19:36:27 (5901): Disabling Audio Support for VM.
2019-08-01 19:36:27 (5901): Disabling Clipboard Support for VM.
2019-08-01 19:36:27 (5901): Disabling Drag and Drop Support for VM.
2019-08-01 19:36:27 (5901): Adding storage controller(s) to VM.
2019-08-01 19:36:27 (5901): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2019-08-01 19:36:28 (5901): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-08-01 19:36:28 (5901): Enabling shared directory for VM.
2019-08-01 19:36:28 (5901): Starting VM. (boinc_54f4f25451af35f0, slot#6)
2019-08-01 19:36:30 (5901): Successfully started VM. (PID = '6442')
2019-08-01 19:36:30 (5901): Reporting VM Process ID to BOINC.
2019-08-01 19:36:30 (5901): Guest Log: BIOS: VirtualBox 5.2.18
2019-08-01 19:36:30 (5901): Guest Log: CPUID EDX: 0x078bfbff
2019-08-01 19:36:30 (5901): VM state change detected. (old = 'poweroff', new = 'running')
2019-08-01 19:36:30 (5901): Preference change detected
2019-08-01 19:36:30 (5901): Setting CPU throttle for VM. (100%)
2019-08-01 19:36:30 (5901): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2019-08-01 19:36:35 (5901): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-08-01 19:36:35 (5901): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2019-08-01 19:36:35 (5901): Guest Log: BIOS: Boot from Hard Disk 0 failed
2019-08-01 19:36:35 (5901): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2019-08-01 19:36:35 (5901): Guest Log: BIOS: Booting from CD-ROM...
2019-08-01 19:36:40 (5901): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-08-01 19:36:40 (5901): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000
2019-08-01 19:36:48 (5901): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-08-01 19:36:48 (5901): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-08-01 19:36:48 (5901): Guest Log: net.ipv4.ip_forward = 1
2019-08-01 19:36:48 (5901): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2019-08-01 19:36:48 (5901): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-08-01 19:36:48 (5901): Guest Log: sysctl: "cannot stat %s" is an unknown key
2019-08-01 19:36:48 (5901): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-08-01 19:36:48 (5901): Guest Log: Segmentation fault
2019-08-01 19:36:48 (5901): Guest Log: automount ...
2019-08-01 19:36:48 (5901): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2019-08-01 19:36:48 (5901): Guest Log: automount over.
2019-08-01 19:36:48 (5901): Guest Log: [1;32mSetting hostname to [1;35mboot2docker[0;39m [1;32mDone.[0;39m
2019-08-01 19:36:48 (5901): Guest Log: Thu Aug 1 19:36:46 UTC 2019 dhcp -------------------------------
2019-08-01 19:36:53 (5901): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1066)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00 (1286)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXCPU:00 (1287)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00 (1288)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0 (1289)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0/event0 (1290)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00 (1291)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1 (1292)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1/event1 (1293)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00 (1294)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00 (1295)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00 (1296)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00/power_supply/AC (1297)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00 (1298)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/device:01 (1299)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6 (1300)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6/event5 (1301)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1302)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1303)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1304)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1305)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00 (1311)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1312)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1313)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1314)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1315)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1316)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1317)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1318)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1319)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1320)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:02 (1321)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1322)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1323)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1324)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1325)
2019-08-01 19:36:53 (5901): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:01 (1326)
2019-08-01 19:36:54 (5901): Guest Log: Thu Aug 1 19:36:52 UTC 2019 dhcp -------------------------------
2019-08-01 19:36:54 (5901): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log
2019-08-01 19:36:54 (5901): Guest Log: 00:00:00.000134 main Log opened 2019-08-01T19:36:52.902034000Z
2019-08-01 19:36:54 (5901): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log
2019-08-01 19:36:54 (5901): Guest Log: 00:00:00.000134 main Log opened 2019-08-01T19:36:52.902034000Z
2019-08-01 19:36:54 (5901): Guest Log: 00:00:00.002009 main OS Product: Linux
2019-08-01 19:36:54 (5901): Guest Log: 00:00:00.002009 main OS Product: Linux
2019-08-01 19:36:54 (5901): Guest Log: 00:00:00.002611 main OS Release: 4.1.19-boot2docker
2019-08-01 19:36:54 (5901): Guest Log: 00:00:00.002611 main OS Release: 4.1.19-boot2docker
2019-08-01 19:36:54 (5901): Guest Log: 00:00:00.003460 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-08-01 19:36:54 (5901): Guest Log: 00:00:00.003460 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-08-01 19:36:54 (5901): Guest Log: 00:00:00.004214 main Executable: /sbin/VBoxService
2019-08-01 19:36:54 (5901): Guest Log: 00:00:00.004218 main Process ID: 741
2019-08-01 19:36:54 (5901): Guest Log: 00:00:00.004219 main Package type: LINUX_64BITS_GENERIC
2019-08-01 19:36:54 (5901): Guest Log: 00:00:00.004214 main Executable: /sbin/VBoxService
2019-08-01 19:36:54 (5901): Guest Log: 00:00:00.004218 main Process ID: 741
2019-08-01 19:36:54 (5901): Guest Log: 00:00:00.004219 main Package type: LINUX_64BITS_GENERIC
2019-08-01 19:36:54 (5901): Guest Log: 00:00:00.007547 main 5.0.16 r105871 started. Verbose level = 0
2019-08-01 19:36:54 (5901): Guest Log: 00:00:00.007547 main 5.0.16 r105871 started. Verbose level = 0
2019-08-01 19:36:54 (5901): Guest Log: 00:00:00.031061 vminfo rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2019-08-01 19:36:54 (5901): Guest Log: 00:00:00.031178 vminfo Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2019-08-01 19:36:54 (5901): Guest Log: Mounting BOINC shared/...
2019-08-01 19:36:54 (5901): Guest Log: -------------------
2019-08-01 19:36:54 (5901): Guest Log: Fri Aug 2 00:36:54 UTC 2019
2019-08-01 19:37:00 (5901): Guest Log: 00:00:05.039766 vminfo Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2019-08-01 19:37:00 (5901): Guest Log: Fri Aug 2 00:36:59 UTC 2019
2019-08-01 19:37:00 (5901): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default
2019-08-01 19:37:00 (5901): Guest Log: link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2019-08-01 19:37:00 (5901): Guest Log: inet 127.0.0.1/8 scope host lo
2019-08-01 19:37:00 (5901): Guest Log: valid_lft forever preferred_lft forever
2019-08-01 19:37:00 (5901): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default
2019-08-01 19:37:00 (5901): Guest Log: link/ether 66:4f:d2:e2:bf:22 brd ff:ff:ff:ff:ff:ff
2019-08-01 19:37:00 (5901): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2019-08-01 19:37:00 (5901): Guest Log: link/ether 08:00:27:d7:d4:56 brd ff:ff:ff:ff:ff:ff
2019-08-01 19:37:00 (5901): Guest Log: inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2019-08-01 19:37:00 (5901): Guest Log: valid_lft forever preferred_lft forever
2019-08-01 19:37:00 (5901): Guest Log: -------------------
2019-08-01 19:37:00 (5901): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2019-08-01 19:37:00 (5901): Guest Log: Waiting for Docker daemon to start...
2019-08-01 19:37:03 (5901): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE
2019-08-01 19:37:03 (5901): Guest Log: Running boinc_app...
2019-08-01 19:37:03 (5901): Guest Log: Importing Docker image from BOINC...
2019-08-01 19:37:03 (5901): Guest Log: Filesystem Size Used Available Use% Mounted on
2019-08-01 19:37:03 (5901): Guest Log: tmpfs 2.6G 164.2M 2.5G 6% /
2019-08-01 19:37:03 (5901): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2019-08-01 19:37:05 (5901): Guest Log: 00:00:10.071145 vminfo Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2019-08-01 19:37:12 (5901): Guest Log: doing docker load...
2019-08-01 19:37:26 (5901): Guest Log: Filesystem Size Used Available Use% Mounted on
2019-08-01 19:37:26 (5901): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /
2019-08-01 19:37:26 (5901): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2019-08-01 19:37:26 (5901): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2019-08-01 19:37:26 (5901): Guest Log: shared 915.4G 63.3G 852.1G 7% /root/shared
2019-08-01 19:37:26 (5901): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /var/lib/docker/aufs
2019-08-01 19:37:26 (5901): Guest Log: total used free shared buff/cache available
2019-08-01 19:37:26 (5901): Guest Log: Mem: 3007 51 2254 663 702 2254
2019-08-01 19:37:26 (5901): Guest Log: Swap: 701 0 701
2019-08-01 19:37:26 (5901): Guest Log: Building apps directory...
2019-08-01 19:38:21 (5901): Guest Log: Prerun diagnostics...
2019-08-01 19:38:21 (5901): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE
2019-08-01 19:38:21 (5901): Guest Log: nanohub_apps_share64_matlab 4 32c863520615 20 months ago 488.2 MB
2019-08-01 19:38:21 (5901): Guest Log: CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
2019-08-01 19:38:21 (5901): Guest Log: 499.0M /var/lib/docker
2019-08-01 19:38:21 (5901): Guest Log: total used free shared buff/cache available
2019-08-01 19:38:21 (5901): Guest Log: Mem: 3007 54 2239 663 713 2249
2019-08-01 19:38:21 (5901): Guest Log: Swap: 701 0 701
2019-08-01 19:38:21 (5901): Guest Log: Filesystem Size Used Available Use% Mounted on
2019-08-01 19:38:21 (5901): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /
2019-08-01 19:38:21 (5901): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2019-08-01 19:38:21 (5901): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2019-08-01 19:38:21 (5901): Guest Log: Running...
2019-08-01 19:38:21 (5901): Guest Log: 07442347_03.boinc
2019-08-01 19:38:21 (5901): Guest Log: 07442347_03.sh
2019-08-01 19:52:57 (5901): Guest Log: boinc_app exited (0)
2019-08-01 19:52:57 (5901): Guest Log: Saving results...
2019-08-01 19:52:57 (5901): Guest Log: 07442347_03_output.tar.gz
2019-08-01 19:53:24 (5901): VM Completion File Detected.
2019-08-01 19:53:24 (5901): Powering off VM.
2019-08-01 19:53:25 (5901): Successfully stopped VM.
2019-08-01 19:53:25 (5901): Deregistering VM. (boinc_54f4f25451af35f0, slot#6)
2019-08-01 19:53:25 (5901): Removing network bandwidth throttle group from VM.
2019-08-01 19:53:25 (5901): Removing storage controller(s) from VM.
2019-08-01 19:53:25 (5901): Removing VM from VirtualBox.
2019-08-01 19:53:25 (5901): Removing virtual ISO 9660 disk from VirtualBox.
19:53:30 (5901): called boinc_finish(0)
</stderr_txt>
<message>
upload failure: <file_xfer_error>
<file_name>07442347_03_2_r120249356_0</file_name>
<error_code>-131 (file size too big)</error_code>
</file_xfer_error>
</message>
]]>
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