Task 425856

Name 06982540_048_4
Workunit 234387
Created 13 Dec 2018, 18:22:48 UTC
Sent 13 Dec 2018, 18:23:09 UTC
Report deadline 14 Dec 2018, 2:23:09 UTC
Received 14 Dec 2018, 5:15:52 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 218
Run time 5 hours 2 min 43 sec
CPU time 3 hours 54 min 54 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 2.23 GFLOPS
Application version boinc2docker v1.12 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 94.55 MB
Peak swap size 3.54 GB
Peak disk usage 246.91 MB

Stderr output

<core_client_version>7.4.23</core_client_version>
<![CDATA[
<stderr_txt>
2018-12-13 19:10:56 (7259): vboxwrapper (7.7.26197): starting
2018-12-13 19:10:56 (7259): Feature: Checkpoint interval offset (274 seconds)
2018-12-13 19:10:56 (7259): Detected: VirtualBox VboxManage Interface (Version: 5.1.8)
2018-12-13 19:10:56 (7259): Detected: Minimum checkpoint interval (600.000000 seconds)
2018-12-13 19:10:56 (7259): Create VM. (boinc_c0e415e75b833b4d, slot#3)
2018-12-13 19:10:56 (7259): Updating drive controller type and model for desired configuration.
2018-12-13 19:11:00 (7259): Setting Memory Size for VM. (3072MB)
2018-12-13 19:11:00 (7259): Setting CPU Count for VM. (1)
2018-12-13 19:11:00 (7259): Setting Chipset Options for VM.
2018-12-13 19:11:00 (7259): Setting Boot Options for VM.
2018-12-13 19:11:00 (7259): Setting Network Configuration for NAT.
2018-12-13 19:11:01 (7259): Enabling VM Network Access.
2018-12-13 19:11:01 (7259): Disabling USB Support for VM.
2018-12-13 19:11:01 (7259): Disabling COM Port Support for VM.
2018-12-13 19:11:01 (7259): Disabling LPT Port Support for VM.
2018-12-13 19:11:01 (7259): Disabling Audio Support for VM.
2018-12-13 19:11:01 (7259): Disabling Clipboard Support for VM.
2018-12-13 19:11:01 (7259): Disabling Drag and Drop Support for VM.
2018-12-13 19:11:01 (7259): Adding storage controller(s) to VM.
2018-12-13 19:11:01 (7259): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2018-12-13 19:11:01 (7259): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2018-12-13 19:11:01 (7259): Enabling shared directory for VM.
2018-12-13 19:11:02 (7259): Starting VM. (boinc_c0e415e75b833b4d, slot#3)
2018-12-13 19:11:03 (7259): Successfully started VM. (PID = '7906')
2018-12-13 19:11:03 (7259): Reporting VM Process ID to BOINC.
2018-12-13 19:11:03 (7259): Guest Log: BIOS: VirtualBox 5.1.8
2018-12-13 19:11:03 (7259): VM state change detected. (old = 'poweroff', new = 'running')
2018-12-13 19:11:04 (7259): Preference change detected
2018-12-13 19:11:04 (7259): Setting CPU throttle for VM. (75%)
2018-12-13 19:11:04 (7259): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2018-12-13 19:11:05 (7259): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2018-12-13 19:11:05 (7259): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2018-12-13 19:11:05 (7259): Guest Log: BIOS: Boot from Hard Disk 0 failed
2018-12-13 19:11:05 (7259): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2018-12-13 19:11:05 (7259): Guest Log: BIOS: Booting from CD-ROM...
2018-12-13 19:11:08 (7259): Guest Log: BIOS: KBD: unsupported int 16h function 03
2018-12-13 19:11:29 (7259): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2018-12-13 19:11:29 (7259): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2018-12-13 19:11:29 (7259): Guest Log: net.ipv4.ip_forward = 1
2018-12-13 19:11:29 (7259): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2018-12-13 19:11:29 (7259): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-12-13 19:11:29 (7259): Guest Log: sysctl: "cannot stat %s" is an unknown key
2018-12-13 19:11:29 (7259): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-12-13 19:11:29 (7259): Guest Log: Segmentation fault
2018-12-13 19:11:30 (7259): Guest Log: automount ...
2018-12-13 19:11:30 (7259): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2018-12-13 19:11:30 (7259): Guest Log: automount over.
2018-12-13 19:11:30 (7259): Guest Log: Setting hostname to boot2docker Done.
2018-12-13 19:11:30 (7259): Guest Log: Thu Dec 13 19:11:27 UTC 2018 dhcp -------------------------------
2018-12-13 19:11:35 (7259): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:00 (1283)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00 (1291)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00 (1292)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00/power_supply/AC (1295)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00 (1296)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/device:01 (1297)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6 (1298)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6/event5 (1299)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1300)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1301)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1302)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1303)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1304)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1305)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1306)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1307)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1308)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00 (1309)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1310)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1311)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1312)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1313)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1314)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1315)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1316)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1317)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1318)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:02 (1319)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1321)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1322)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1323)
2018-12-13 19:11:35 (7259): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:01 (1324)
2018-12-13 19:11:36 (7259): Guest Log: Thu Dec 13 19:11:33 UTC 2018 dhcp -------------------------------
2018-12-13 19:11:37 (7259): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2018-12-13 19:11:37 (7259): Guest Log: 00:00:00.000938 main     Log opened 2018-12-13T19:11:34.348423000Z
2018-12-13 19:11:37 (7259): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2018-12-13 19:11:37 (7259): Guest Log: 00:00:00.000938 main     Log opened 2018-12-13T19:11:34.348423000Z
2018-12-13 19:11:37 (7259): Guest Log: 00:00:00.008072 main     OS Product: Linux
2018-12-13 19:11:37 (7259): Guest Log: 00:00:00.008152 main     OS Release: 4.1.19-boot2docker
2018-12-13 19:11:37 (7259): Guest Log: 00:00:00.008216 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-12-13 19:11:37 (7259): Guest Log: 00:00:00.008276 main     Executable: /sbin/VBoxService
2018-12-13 19:11:37 (7259): Guest Log: 00:00:00.008278 main     Process ID: 766
2018-12-13 19:11:37 (7259): Guest Log: 00:00:00.008279 main     Package type: LINUX_64BITS_GENERIC
2018-12-13 19:11:37 (7259): Guest Log: 00:00:00.008072 main     OS Product: Linux
2018-12-13 19:11:37 (7259): Guest Log: 00:00:00.008152 main     OS Release: 4.1.19-boot2doc00:00:00.011966 main     5.0.16 r105871 started. Verbose level = 0
2018-12-13 19:11:37 (7259): Guest Log: ker
2018-12-13 19:11:37 (7259): Guest Log: 00:00:00.008216 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-12-13 19:11:37 (7259): Guest Log: 00:00:00.008276 m00:00:00.039498 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2018-12-13 19:11:37 (7259): Guest Log: 00:00:00.039606 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2018-12-13 19:11:37 (7259): Guest Log: ain     Executable: /sbin/VBoxService
2018-12-13 19:11:37 (7259): Guest Log: 00:00:00.008278 main     Process ID: 766
2018-12-13 19:11:37 (7259): Guest Log: 00:00:00.008279 main     Package type: LINUX_64BITS_GENERIC
2018-12-13 19:11:37 (7259): Guest Log: 00:00:00.011966 main     5.0.16 r105871 started. Verbose level = 0
2018-12-13 19:11:37 (7259): Guest Log: Mounting BOINC shared/...
2018-12-13 19:11:37 (7259): Guest Log: -------------------
2018-12-13 19:11:37 (7259): Guest Log: Fri Dec 14 00:11:37 UTC 2018
2018-12-13 19:11:42 (7259): Guest Log: 00:00:05.053986 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2018-12-13 19:11:42 (7259): Guest Log: Fri Dec 14 00:11:42 UTC 2018
2018-12-13 19:11:42 (7259): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2018-12-13 19:11:42 (7259): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2018-12-13 19:11:42 (7259): Guest Log:     inet 127.0.0.1/8 scope host lo
2018-12-13 19:11:42 (7259): Guest Log:        valid_lft forever preferred_lft forever
2018-12-13 19:11:42 (7259): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2018-12-13 19:11:42 (7259): Guest Log:     link/ether a6:be:53:0e:7c:30 brd ff:ff:ff:ff:ff:ff
2018-12-13 19:11:42 (7259): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2018-12-13 19:11:42 (7259): Guest Log:     link/ether 08:00:27:41:32:a3 brd ff:ff:ff:ff:ff:ff
2018-12-13 19:11:42 (7259): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2018-12-13 19:11:42 (7259): Guest Log:        valid_lft forever preferred_lft forever
2018-12-13 19:11:42 (7259): Guest Log: -------------------
2018-12-13 19:11:42 (7259): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2018-12-13 19:11:42 (7259): Guest Log: Waiting for Docker daemon to start...
2018-12-13 19:11:44 (7259): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2018-12-13 19:11:44 (7259): Guest Log: Running boinc_app...
2018-12-13 19:11:44 (7259): Guest Log: Importing Docker image from BOINC...
2018-12-13 19:11:44 (7259): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-12-13 19:11:44 (7259): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /
2018-12-13 19:11:44 (7259): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-12-13 19:11:44 (7259): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-12-13 19:11:44 (7259): Guest Log: shared                  916.3G     72.7G    843.6G   8% /root/shared
2018-12-13 19:11:44 (7259): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /var/lib/docker/aufs
2018-12-13 19:11:47 (7259): Guest Log: 00:00:10.055288 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2018-12-13 19:12:01 (7259): Guest Log: doing docker load...
2018-12-13 19:12:23 (7259): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-12-13 19:12:24 (7259): Guest Log: tmpfs                     2.6G    631.9M      2.0G  23% /
2018-12-13 19:12:24 (7259): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-12-13 19:12:24 (7259): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-12-13 19:12:24 (7259): Guest Log: shared                  916.3G     72.6G    843.7G   8% /root/shared
2018-12-13 19:12:24 (7259): Guest Log: tmpfs                     2.6G    631.9M      2.0G  23% /var/lib/docker/aufs
2018-12-13 19:12:24 (7259): Guest Log:               total        used        free      shared  buff/cache   available
2018-12-13 19:12:24 (7259): Guest Log: Mem:           3007          49        2289         631         668        2289
2018-12-13 19:12:24 (7259): Guest Log: Swap:           702           0         702
2018-12-13 19:12:24 (7259): Guest Log: Building apps directory...
2018-12-13 19:12:42 (7259): Guest Log: Prerun diagnostics...
2018-12-13 19:12:42 (7259): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2018-12-13 19:12:42 (7259): Guest Log: nanohub_apps_base   11                  42db2bf7db3d        12 months ago       458.1 MB
2018-12-13 19:12:42 (7259): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2018-12-13 19:12:42 (7259): Guest Log: 467.8M	/var/lib/docker
2018-12-13 19:12:42 (7259): Guest Log:               total        used        free      shared  buff/cache   available
2018-12-13 19:12:42 (7259): Guest Log: Mem:           3007          49        2287         631         670        2288
2018-12-13 19:12:42 (7259): Guest Log: Swap:           702           0         702
2018-12-13 19:12:42 (7259): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-12-13 19:12:42 (7259): Guest Log: tmpfs                     2.6G    631.9M      2.0G  23% /
2018-12-13 19:12:42 (7259): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-12-13 19:12:42 (7259): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-12-13 19:12:42 (7259): Guest Log: shared                  916.3G     72.6G    843.6G   8% /root/shared
2018-12-13 19:12:42 (7259): Guest Log: tmpfs                     2.6G    631.9M      2.0G  23% /var/lib/docker/aufs
2018-12-13 19:12:42 (7259): Guest Log: Running... 
2018-12-13 19:12:43 (7259): Guest Log: 06982540_048.boinc
2018-12-13 19:12:43 (7259): Guest Log: 06982540_048.sh
2018-12-13 20:50:07 (7259): Status Report: Elapsed Time: '6000.000000'
2018-12-13 20:50:07 (7259): Status Report: CPU Time: '4582.510000'
2018-12-13 22:29:10 (7259): Status Report: Elapsed Time: '12000.378362'
2018-12-13 22:29:10 (7259): Status Report: CPU Time: '9181.010000'
2018-12-14 00:08:13 (7259): Status Report: Elapsed Time: '18000.391367'
2018-12-14 00:08:13 (7259): Status Report: CPU Time: '13758.380000'
2018-12-14 00:15:29 (7259): Guest Log: boinc_app exited (0)
2018-12-14 00:15:29 (7259): Guest Log: Saving results...
2018-12-14 00:15:29 (7259): Guest Log: 06982540_048_output.tar.gz
2018-12-14 00:15:30 (7259): VM Completion File Detected.
2018-12-14 00:15:30 (7259): Powering off VM.
2018-12-14 00:15:31 (7259): Successfully stopped VM.
2018-12-14 00:15:31 (7259): Deregistering VM. (boinc_c0e415e75b833b4d, slot#3)
2018-12-14 00:15:31 (7259): Removing network bandwidth throttle group from VM.
2018-12-14 00:15:31 (7259): Removing storage controller(s) from VM.
2018-12-14 00:15:31 (7259): Removing VM from VirtualBox.
2018-12-14 00:15:31 (7259): Removing virtual ISO 9660 disk from VirtualBox.
00:15:36 (7259): called boinc_finish(0)

</stderr_txt>
]]>


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