Task 472506

Name 06996989_119_3
Workunit 256809
Created 25 Dec 2018, 0:07:09 UTC
Sent 25 Dec 2018, 0:07:18 UTC
Report deadline 27 Dec 2018, 0:07:18 UTC
Received 25 Dec 2018, 4:15:54 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 194 (0x000000C2) EXIT_ABORTED_BY_CLIENT
Computer ID 675
Run time 1 min 56 sec
CPU time 30 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 3.29 GFLOPS
Application version boinc2docker v1.12 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 104.22 MB
Peak swap size 3.10 GB
Peak disk usage 1.68 GB

Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<message>
finish file present too long</message>
<stderr_txt>
2018-12-25 10:26:39 (13239): vboxwrapper (7.7.26197): starting
2018-12-25 10:26:39 (13239): Feature: Checkpoint interval offset (43 seconds)
2018-12-25 10:26:39 (13239): Detected: VirtualBox VboxManage Interface (Version: 5.2.18)
2018-12-25 10:26:39 (13239): Detected: Minimum checkpoint interval (600.000000 seconds)
2018-12-25 10:26:39 (13239): Create VM. (boinc_80752515d5be516c, slot#62)
2018-12-25 10:26:39 (13239): Updating drive controller type and model for desired configuration.
2018-12-25 10:26:40 (13239): Setting Memory Size for VM. (3072MB)
2018-12-25 10:26:48 (13239): Setting CPU Count for VM. (1)
2018-12-25 10:27:25 (13239): Setting Chipset Options for VM.
2018-12-25 10:27:26 (13239): Setting Boot Options for VM.
2018-12-25 10:27:26 (13239): Setting Network Configuration for NAT.
2018-12-25 10:27:27 (13239): Enabling VM Network Access.
2018-12-25 10:27:28 (13239): Disabling USB Support for VM.
2018-12-25 10:27:32 (13239): Disabling COM Port Support for VM.
2018-12-25 10:27:33 (13239): Disabling LPT Port Support for VM.
2018-12-25 10:27:33 (13239): Disabling Audio Support for VM.
2018-12-25 10:27:33 (13239): Disabling Clipboard Support for VM.
2018-12-25 10:27:34 (13239): Disabling Drag and Drop Support for VM.
2018-12-25 10:27:34 (13239): Adding storage controller(s) to VM.
2018-12-25 10:27:34 (13239): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2018-12-25 10:27:35 (13239): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2018-12-25 10:27:35 (13239): Enabling shared directory for VM.
2018-12-25 10:27:35 (13239): Starting VM. (boinc_80752515d5be516c, slot#62)
2018-12-25 10:27:37 (13239): Successfully started VM. (PID = '18197')
2018-12-25 10:27:37 (13239): Reporting VM Process ID to BOINC.
2018-12-25 10:27:37 (13239): Guest Log: BIOS: VirtualBox 5.2.18
2018-12-25 10:27:37 (13239): Guest Log: CPUID EDX: 0x078bfbff
2018-12-25 10:27:37 (13239): VM state change detected. (old = 'poweroff', new = 'running')
2018-12-25 10:27:37 (13239): Preference change detected
2018-12-25 10:27:37 (13239): Setting CPU throttle for VM. (100%)
2018-12-25 10:27:37 (13239): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2018-12-25 10:27:39 (13239): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2018-12-25 10:27:39 (13239): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2018-12-25 10:27:39 (13239): Guest Log: BIOS: Booting from CD-ROM...
2018-12-25 10:27:45 (13239): Guest Log: BIOS: KBD: unsupported int 16h function 03
2018-12-25 10:27:45 (13239): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2018-12-25 10:27:58 (13239): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2018-12-25 10:27:58 (13239): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2018-12-25 10:28:13 (13239): Guest Log: net.ipv4.ip_forward = 1
2018-12-25 10:28:13 (13239): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2018-12-25 10:28:13 (13239): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-12-25 10:28:13 (13239): Guest Log: sysctl: "cannot stat %s" is an unknown key
2018-12-25 10:28:13 (13239): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-12-25 10:28:13 (13239): Guest Log: Segmentation fault
2018-12-25 10:28:14 (13239): Guest Log: automount ...
2018-12-25 10:28:14 (13239): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2018-12-25 10:28:14 (13239): Guest Log: automount over.
2018-12-25 10:28:14 (13239): Guest Log: Setting hostname to boot2docker Done.
2018-12-25 10:28:14 (13239): Guest Log: Tue Dec 25 10:28:11 UTC 2018 dhcp -------------------------------
2018-12-25 10:28:19 (13239): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2018-12-25 10:28:19 (13239): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1316)
2018-12-25 10:28:20 (13239): Guest Log: Tue Dec 25 10:28:17 UTC 2018 dhcp -------------------------------
2018-12-25 10:28:20 (13239): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2018-12-25 10:28:20 (13239): Guest Log: 00:00:00.000111 main     Log opened 2018-12-25T10:28:17.676151000Z
2018-12-25 10:28:20 (13239): Guest Log: 00:00:00.005399 main     OS Product: Linux
2018-12-25 10:28:20 (13239): Guest Log: 00:00:00.005483 main     OS Release: 4.1.19-boot2docker
2018-12-25 10:28:20 (13239): Guest Log: 00:00:00.005529 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-12-25 10:28:20 (13239): Guest Log: 00:00:00.005569 main     Executable: /sbin/VBoxService
2018-12-25 10:28:20 (13239): Guest Log: 00:00:00.005571 main     Process ID: 793
2018-12-25 10:28:20 (13239): Guest Log: 00:00:00.005572 main     Package type: LINUX_64BITS_GENERIC
2018-12-25 10:28:20 (13239): Guest Log: 00:00:00.005399 00:00:00.006446 main     5.0.16 r105871 started. Verbose level = 0
2018-12-25 10:28:20 (13239): Guest Log: main     OS Product: Linux
2018-12-25 10:28:20 (13239): Guest Log: 00:00:00.005483 main     OS Release: 4.1.19-boot2docker
2018-12-25 10:28:20 (13239): Guest Log: 00:00:00.005529 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-12-25 10:28:20 (13239): Guest Log: 000:00:00.014776 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2018-12-25 10:28:20 (13239): Guest Log: 00:00:00.014848 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2018-12-25 10:28:20 (13239): Guest Log: 0:00:00.005569 main     Executable: /sbin/VBoxService
2018-12-25 10:28:20 (13239): Guest Log: 00:00:00.005571 main     Process ID: 793
2018-12-25 10:28:20 (13239): Guest Log: 00:00:00.005572 main     Package type: LINUX_64BITS_GENERIC
2018-12-25 10:28:20 (13239): Guest Log: 00:00:00.006446 main     5.0.16 r105871 started. Verbose level = 0
2018-12-25 10:28:20 (13239): Guest Log: Mounting BOINC shared/...
2018-12-25 10:28:20 (13239): Guest Log: -------------------
2018-12-25 10:28:20 (13239): Guest Log: Tue Dec 25 00:28:19 UTC 2018
2018-12-25 10:28:25 (13239): Guest Log: 00:00:05.015456 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2018-12-25 10:28:25 (13239): Guest Log: Tue Dec 25 00:28:24 UTC 2018
2018-12-25 10:28:25 (13239): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2018-12-25 10:28:25 (13239): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2018-12-25 10:28:25 (13239): Guest Log:     inet 127.0.0.1/8 scope host lo
2018-12-25 10:28:25 (13239): Guest Log:        valid_lft forever preferred_lft forever
2018-12-25 10:28:25 (13239): Guest Log:     inet6 ::1/128 scope host 
2018-12-25 10:28:25 (13239): Guest Log:        valid_lft forever preferred_lft forever
2018-12-25 10:28:25 (13239): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2018-12-25 10:28:25 (13239): Guest Log:     link/ether 7a:03:7e:fb:e0:63 brd ff:ff:ff:ff:ff:ff
2018-12-25 10:28:25 (13239): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2018-12-25 10:28:25 (13239): Guest Log:     link/ether 08:00:27:fa:37:d0 brd ff:ff:ff:ff:ff:ff
2018-12-25 10:28:25 (13239): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2018-12-25 10:28:25 (13239): Guest Log:        valid_lft forever preferred_lft forever
2018-12-25 10:28:25 (13239): Guest Log:     inet6 fe80::a00:27ff:fefa:37d0/64 scope link 
2018-12-25 10:28:25 (13239): Guest Log:        valid_lft forever preferred_lft forever
2018-12-25 10:28:25 (13239): Guest Log: -------------------
2018-12-25 10:28:25 (13239): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2018-12-25 10:28:25 (13239): Guest Log: Waiting for Docker daemon to start...
2018-12-25 10:28:26 (13239): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2018-12-25 10:28:26 (13239): Guest Log: Running boinc_app...
2018-12-25 10:28:26 (13239): Guest Log: Importing Docker image from BOINC...
2018-12-25 10:28:26 (13239): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-12-25 10:28:26 (13239): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-12-25 10:28:26 (13239): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-12-25 10:28:26 (13239): Guest Log: shared                  219.8G     39.1G    180.7G  18% /root/shared
2018-12-25 10:28:26 (13239): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /var/lib/docker/aufs
2018-12-25 10:28:30 (13239): Guest Log: 00:00:10.016543 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2018-12-25 12:36:44 (13239): Guest Log: doing docker load...
2018-12-25 12:36:45 (13239): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-12-25 12:36:45 (13239): Guest Log: tmpfs                     2.6G    721.5M      1.9G  27% /
2018-12-25 12:36:45 (13239): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-12-25 12:36:45 (13239): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-12-25 12:36:45 (13239): Guest Log: shared                  219.8G     38.7G    181.0G  18% /root/shared
2018-12-25 12:36:45 (13239): Guest Log: tmpfs                     2.6G    721.5M      1.9G  27% /var/lib/docker/aufs
2018-12-25 12:36:45 (13239): Guest Log:               total        used        free      shared  buff/cache   available
2018-12-25 12:36:45 (13239): Guest Log: Mem:           3007          51        2194         721         761        2195
2018-12-25 12:36:45 (13239): Guest Log: Swap:           700           0         700
2018-12-25 12:36:45 (13239): Guest Log: Building apps directory...
2018-12-25 12:36:45 (13239): Guest Log: Prerun diagnostics...
2018-12-25 12:36:45 (13239): Guest Log: REPOSITORY                    TAG                 IMAGE ID            CREATED             SIZE
2018-12-25 12:36:45 (13239): Guest Log: nanohub_apps_share64_octave   5                   a3c939485731        12 months ago       547 MB
2018-12-25 12:36:45 (13239): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2018-12-25 12:36:45 (13239): Guest Log: 557.4M	/var/lib/docker
2018-12-25 12:36:45 (13239): Guest Log:               total        used        free      shared  buff/cache   available
2018-12-25 12:36:45 (13239): Guest Log: Mem:           3007          38        2202         721         766        2207
2018-12-25 12:36:45 (13239): Guest Log: Swap:           700           0         700
2018-12-25 12:36:45 (13239): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-12-25 12:36:45 (13239): Guest Log: tmpfs                     2.6G    721.5M      1.9G  27% /
2018-12-25 12:36:45 (13239): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-12-25 12:36:45 (13239): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-12-25 12:36:45 (13239): Guest Log: shared                  219.8G     58.4G    161.4G  27% /root/shared
2018-12-25 12:36:45 (13239): Guest Log: tmpfs                     2.6G    721.5M      1.9G  27% /var/lib/docker/aufs
2018-12-25 12:36:45 (13239): Guest Log: Running... 
2018-12-25 12:36:45 (13239): Guest Log: 06996989_119.boinc
2018-12-25 12:36:45 (13239): Guest Log: 06996989_119.sh
2018-12-25 12:42:13 (13239): Guest Log: boinc_app exited (0)
2018-12-25 12:42:14 (13239): Guest Log: Saving results...
2018-12-25 12:42:14 (13239): Guest Log: 06996989_119_output.tar.gz
2018-12-25 12:42:14 (13239): VM Completion File Detected.
2018-12-25 12:42:15 (13239): Powering off VM.
2018-12-25 12:43:52 (13239): Successfully stopped VM.
2018-12-25 12:43:52 (13239): Deregistering VM. (boinc_80752515d5be516c, slot#62)
2018-12-25 12:43:54 (13239): Removing network bandwidth throttle group from VM.
2018-12-25 12:43:59 (13239): Removing storage controller(s) from VM.
2018-12-25 12:44:07 (13239): Removing VM from VirtualBox.
2018-12-25 12:44:09 (13239): Removing virtual ISO 9660 disk from VirtualBox.
12:44:14 (13239): called boinc_finish(0)

</stderr_txt>
]]>


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