Task 492933

Name	07005416_136_0
Workunit	276953
Created	28 Dec 2018, 22:22:19 UTC
Sent	28 Dec 2018, 22:22:34 UTC
Report deadline	30 Dec 2018, 22:22:34 UTC
Received	28 Dec 2018, 23:16:16 UTC
Server state	Over
Outcome	Computation error
Client state	Compute error
Exit status	194 (0x000000C2) EXIT_ABORTED_BY_CLIENT
Computer ID	699
Run time	1 min 57 sec
CPU time	3 min
Validate state	Invalid
Credit	0.00
Device peak FLOPS	4.43 GFLOPS
Application version	boinc2docker v1.12 (vbox64_mt) x86_64-pc-linux-gnu
Peak working set size	1.88 GB
Peak swap size	3.26 GB
Peak disk usage	1.58 GB
Stderr output

<core_client_version>7.6.31</core_client_version>
<![CDATA[
<message>
finish file present too long
</message>
<stderr_txt>
2018-12-28 22:23:03 (95777): vboxwrapper (7.7.26197): starting
2018-12-28 22:23:03 (95777): Feature: Checkpoint interval offset (308 seconds)
2018-12-28 22:23:03 (95777): Detected: VirtualBox VboxManage Interface (Version: 5.2.8)
2018-12-28 22:23:04 (95777): Detected: Minimum checkpoint interval (600.000000 seconds)
2018-12-28 22:23:04 (95777): Create VM. (boinc_334bb01df7064003, slot#74)
2018-12-28 22:23:04 (95777): Updating drive controller type and model for desired configuration.
2018-12-28 22:23:05 (95777): Setting Memory Size for VM. (3072MB)
2018-12-28 22:23:06 (95777): Setting CPU Count for VM. (1)
2018-12-28 22:24:46 (95777): Setting Chipset Options for VM.
2018-12-28 22:24:46 (95777): Setting Boot Options for VM.
2018-12-28 22:24:46 (95777): Setting Network Configuration for NAT.
2018-12-28 22:24:46 (95777): Enabling VM Network Access.
2018-12-28 22:24:47 (95777): Disabling USB Support for VM.
2018-12-28 22:24:47 (95777): Disabling COM Port Support for VM.
2018-12-28 22:24:47 (95777): Disabling LPT Port Support for VM.
2018-12-28 22:24:47 (95777): Disabling Audio Support for VM.
2018-12-28 22:24:48 (95777): Disabling Clipboard Support for VM.
2018-12-28 22:24:48 (95777): Disabling Drag and Drop Support for VM.
2018-12-28 22:24:48 (95777): Adding storage controller(s) to VM.
2018-12-28 22:24:48 (95777): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2018-12-28 22:24:48 (95777): Adding VirtualBox Guest Additions to VM.
2018-12-28 22:24:48 (95777): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2018-12-28 22:24:49 (95777): Enabling shared directory for VM.
2018-12-28 22:24:49 (95777): Starting VM. (boinc_334bb01df7064003, slot#74)
2018-12-28 22:24:51 (95777): Successfully started VM. (PID = '102906')
2018-12-28 22:24:51 (95777): Reporting VM Process ID to BOINC.
2018-12-28 22:24:51 (95777): Guest Log: BIOS: VirtualBox 5.2.8
2018-12-28 22:24:51 (95777): Guest Log: CPUID EDX: 0x078bfbff
2018-12-28 22:24:51 (95777): VM state change detected. (old = 'poweroff', new = 'running')
2018-12-28 22:24:51 (95777): Preference change detected
2018-12-28 22:24:51 (95777): Setting CPU throttle for VM. (100%)
2018-12-28 22:24:51 (95777): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2018-12-28 22:24:53 (95777): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2018-12-28 22:24:53 (95777): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2018-12-28 22:24:53 (95777): Guest Log: BIOS: Boot from Hard Disk 0 failed
2018-12-28 22:24:53 (95777): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2018-12-28 22:24:53 (95777): Guest Log: BIOS: Booting from CD-ROM...
2018-12-28 22:24:54 (95777): Guest Log: BIOS: KBD: unsupported int 16h function 03
2018-12-28 22:24:54 (95777): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2018-12-28 22:25:06 (95777): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2018-12-28 22:25:06 (95777): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2018-12-28 22:26:49 (95777): Guest Log: net.ipv4.ip_forward = 1
2018-12-28 22:26:49 (95777): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2018-12-28 22:26:49 (95777): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-12-28 22:26:49 (95777): Guest Log: sysctl: "cannot stat %s" is an unknown key
2018-12-28 22:26:49 (95777): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-12-28 22:26:49 (95777): Guest Log: Segmentation fault
2018-12-28 22:26:50 (95777): Guest Log: automount ...
2018-12-28 22:26:50 (95777): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2018-12-28 22:26:50 (95777): Guest Log: automount over.
2018-12-28 22:26:50 (95777): Guest Log: [1;32mSetting hostname to [1;35mboot2docker[0;39m [1;32mDone.[0;39m
2018-12-28 22:26:50 (95777): Guest Log: Fri Dec 28 22:26:47 UTC 2018 dhcp -------------------------------
2018-12-28 22:26:55 (95777): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2018-12-28 22:26:55 (95777): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1340)
2018-12-28 22:26:56 (95777): Guest Log: Fri Dec 28 22:26:54 UTC 2018 dhcp -------------------------------
2018-12-28 22:26:56 (95777): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2018-12-28 22:26:56 (95777): Guest Log: 00:00:00.000123 main     Log opened 2018-12-28T22:26:54.125538000Z
2018-12-28 22:26:56 (95777): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2018-12-28 22:26:56 (95777): Guest Log: 00:00:00.000123 main     Log opened 2018-12-28T22:26:54.125538000Z
2018-12-28 22:26:56 (95777): Guest Log: 00:00:00.002626 main     OS Product: Linux
2018-12-28 22:26:56 (95777): Guest Log: 00:00:00.002626 main     OS Product: Linux
2018-12-28 22:26:56 (95777): Guest Log: 00:00:00.003511 main     OS Release: 4.1.19-boot2docker
2018-12-28 22:26:56 (95777): Guest Log: 00:00:00.003511 main     OS Release: 4.1.19-boot2docker
2018-12-28 22:26:56 (95777): Guest Log: 00:00:00.004393 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-12-28 22:26:56 (95777): Guest Log: 00:00:00.004447 main     Executable: /sbin/VBoxService
2018-12-28 22:26:56 (95777): Guest Log: 00:00:00.004449 main     Process ID: 825
2018-12-28 22:26:56 (95777): Guest Log: 00:00:00.004450 main     Package type: LINUX_64BITS_GENERIC
2018-12-28 22:26:56 (95777): Guest Log: 00:00:00.004393 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-12-28 22:26:56 (95777): Guest Log: 00:00:00.004447 main     Executable: /sbin/VBoxService
2018-12-28 22:26:56 (95777): Guest Log: 00:00:00.004449 main     Process ID: 825
2018-12-28 22:26:56 (95777): Guest Log: 00:00:00.004450 main     Package type: LINUX_64BITS_GENERIC
2018-12-28 22:26:56 (95777): Guest Log: 00:00:00.008757 main     5.0.16 r105871 started. Verbose level = 0
2018-12-28 22:26:56 (95777): Guest Log: 00:00:00.008757 main     5.0.16 r105871 started. Verbose level = 0
2018-12-28 22:26:56 (95777): Guest Log: 00:00:00.022061 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2018-12-28 22:26:56 (95777): Guest Log: 00:00:00.022150 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2018-12-28 22:26:56 (95777): Guest Log: Mounting BOINC shared/...
2018-12-28 22:26:56 (95777): Guest Log: -------------------
2018-12-28 22:26:56 (95777): Guest Log: Fri Dec 28 22:26:54 UTC 2018
2018-12-28 22:27:45 (95777): Guest Log: 00:00:05.028142 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2018-12-28 22:27:45 (95777): Guest Log: Fri Dec 28 22:27:01 UTC 2018
2018-12-28 22:27:45 (95777): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2018-12-28 22:27:45 (95777): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2018-12-28 22:27:45 (95777): Guest Log:     inet 127.0.0.1/8 scope host lo
2018-12-28 22:27:45 (95777): Guest Log:        valid_lft forever preferred_lft forever
2018-12-28 22:27:45 (95777): Guest Log:     inet6 ::1/128 scope host 
2018-12-28 22:27:45 (95777): Guest Log:        valid_lft forever preferred_lft forever
2018-12-28 22:27:45 (95777): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2018-12-28 22:27:45 (95777): Guest Log:        valid_lft forever preferred_lft forever
2018-12-28 22:27:45 (95777): Guest Log:     inet6 fe80::a00:27ff:fefd:6c71/64 scope link 
2018-12-28 22:27:45 (95777): Guest Log:        valid_lft forever preferred_lft forever
2018-12-28 22:27:45 (95777): Guest Log: -------------------
2018-12-28 22:27:45 (95777): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2018-12-28 22:27:45 (95777): Guest Log: Waiting for Docker daemon to start...
2018-12-28 22:27:45 (95777): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2018-12-28 22:27:45 (95777): Guest Log: Running boinc_app...
2018-12-28 22:27:45 (95777): Guest Log: Importing Docker image from BOINC...
2018-12-28 22:27:45 (95777): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-12-28 22:27:45 (95777): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /
2018-12-28 22:27:45 (95777): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-12-28 22:27:45 (95777): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-12-28 22:27:45 (95777): Guest Log: shared                  165.3G    107.2G     58.2G  65% /root/shared
2018-12-28 22:27:45 (95777): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /var/lib/docker/aufs
2018-12-28 22:27:45 (95777): Guest Log: 00:00:10.029458 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2018-12-28 22:27:57 (95777): Guest Log: doing docker load...
2018-12-28 22:29:18 (95777): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-12-28 22:29:18 (95777): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2018-12-28 22:29:18 (95777): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-12-28 22:29:18 (95777): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-12-28 22:29:18 (95777): Guest Log: shared                  165.3G    103.1G     62.3G  62% /root/shared
2018-12-28 22:29:18 (95777): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /var/lib/docker/aufs
2018-12-28 22:29:18 (95777): Guest Log:               total        used        free      shared  buff/cache   available
2018-12-28 22:29:18 (95777): Guest Log: Mem:           3007          53        2252         663         701        2252
2018-12-28 22:29:18 (95777): Guest Log: Swap:           701           0         701
2018-12-28 22:29:18 (95777): Guest Log: Building apps directory...
2018-12-28 22:57:49 (95777): Guest Log: Prerun diagnostics...
2018-12-28 22:57:51 (95777): Guest Log: REPOSITORY                    TAG                 IMAGE ID            CREATED             SIZE
2018-12-28 22:57:51 (95777): Guest Log: nanohub_apps_share64_matlab   4                   32c863520615        12 months ago       488.2 MB
2018-12-28 22:57:51 (95777): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2018-12-28 22:57:51 (95777): Guest Log: 499.0M	/var/lib/docker
2018-12-28 22:57:51 (95777): Guest Log:               total        used        free      shared  buff/cache   available
2018-12-28 22:57:51 (95777): Guest Log: Mem:           3007          36        2256         663         713        2266
2018-12-28 22:57:51 (95777): Guest Log: Swap:           701           0         701
2018-12-28 22:57:51 (95777): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-12-28 22:57:51 (95777): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2018-12-28 22:57:51 (95777): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-12-28 22:57:51 (95777): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-12-28 22:57:51 (95777): Guest Log: shared                  165.3G    117.8G     47.5G  71% /root/shared
2018-12-28 22:57:51 (95777): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /var/lib/docker/aufs
2018-12-28 22:57:52 (95777): Guest Log: Running... 
2018-12-28 22:57:52 (95777): Guest Log: 07005416_136.boinc
2018-12-28 22:57:52 (95777): Guest Log: 07005416_136.sh
2018-12-28 23:00:06 (95777): Guest Log: boinc_app exited (0)
2018-12-28 23:00:06 (95777): Guest Log: Saving results...
2018-12-28 23:00:06 (95777): Guest Log: 07005416_136_output.tar.gz
2018-12-28 23:00:06 (95777): VM Completion File Detected.
2018-12-28 23:00:06 (95777): Powering off VM.
2018-12-28 23:00:07 (95777): Successfully stopped VM.
2018-12-28 23:00:07 (95777): Deregistering VM. (boinc_334bb01df7064003, slot#74)
2018-12-28 23:00:07 (95777): Removing network bandwidth throttle group from VM.
2018-12-28 23:00:07 (95777): Removing storage controller(s) from VM.
2018-12-28 23:00:08 (95777): Removing VM from VirtualBox.
2018-12-28 23:00:08 (95777): Removing virtual ISO 9660 disk from VirtualBox.
23:00:13 (95777): called boinc_finish(0)

</stderr_txt>
]]>