Task 492934

Name	07005416_137_0
Workunit	276954
Created	28 Dec 2018, 22:22:19 UTC
Sent	28 Dec 2018, 22:22:34 UTC
Report deadline	30 Dec 2018, 22:22:34 UTC
Received	28 Dec 2018, 23:16:16 UTC
Server state	Over
Outcome	Computation error
Client state	Compute error
Exit status	194 (0x000000C2) EXIT_ABORTED_BY_CLIENT
Computer ID	699
Run time	1 min 46 sec
CPU time	4 min
Validate state	Invalid
Credit	0.00
Device peak FLOPS	4.43 GFLOPS
Application version	boinc2docker v1.12 (vbox64_mt) x86_64-pc-linux-gnu
Peak working set size	1.87 GB
Peak swap size	3.61 GB
Peak disk usage	821.71 MB
Stderr output

<core_client_version>7.6.31</core_client_version>
<![CDATA[
<message>
finish file present too long
</message>
<stderr_txt>
2018-12-28 22:24:48 (101378): vboxwrapper (7.7.26197): starting
2018-12-28 22:24:48 (101378): Feature: Checkpoint interval offset (476 seconds)
2018-12-28 22:24:48 (101378): Detected: VirtualBox VboxManage Interface (Version: 5.2.8)
2018-12-28 22:24:49 (101378): Detected: Minimum checkpoint interval (600.000000 seconds)
2018-12-28 22:24:49 (101378): Create VM. (boinc_9efcbd096cdb779f, slot#87)
2018-12-28 22:24:49 (101378): Updating drive controller type and model for desired configuration.
2018-12-28 22:24:49 (101378): Setting Memory Size for VM. (3072MB)
2018-12-28 22:24:50 (101378): Setting CPU Count for VM. (1)
2018-12-28 22:24:50 (101378): Setting Chipset Options for VM.
2018-12-28 22:24:50 (101378): Setting Boot Options for VM.
2018-12-28 22:24:50 (101378): Setting Network Configuration for NAT.
2018-12-28 22:24:50 (101378): Enabling VM Network Access.
2018-12-28 22:24:51 (101378): Disabling USB Support for VM.
2018-12-28 22:24:51 (101378): Disabling COM Port Support for VM.
2018-12-28 22:24:51 (101378): Disabling LPT Port Support for VM.
2018-12-28 22:24:51 (101378): Disabling Audio Support for VM.
2018-12-28 22:24:51 (101378): Disabling Clipboard Support for VM.
2018-12-28 22:24:51 (101378): Disabling Drag and Drop Support for VM.
2018-12-28 22:24:52 (101378): Adding storage controller(s) to VM.
2018-12-28 22:24:52 (101378): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2018-12-28 22:24:52 (101378): Adding VirtualBox Guest Additions to VM.
2018-12-28 22:24:52 (101378): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2018-12-28 22:24:52 (101378): Enabling shared directory for VM.
2018-12-28 22:24:53 (101378): Starting VM. (boinc_9efcbd096cdb779f, slot#87)
2018-12-28 22:24:55 (101378): Successfully started VM. (PID = '107503')
2018-12-28 22:24:55 (101378): Reporting VM Process ID to BOINC.
2018-12-28 22:24:55 (101378): Guest Log: BIOS: VirtualBox 5.2.8
2018-12-28 22:24:55 (101378): Guest Log: CPUID EDX: 0x078bfbff
2018-12-28 22:24:55 (101378): VM state change detected. (old = 'poweroff', new = 'running')
2018-12-28 22:24:56 (101378): Preference change detected
2018-12-28 22:24:56 (101378): Setting CPU throttle for VM. (100%)
2018-12-28 22:25:00 (101378): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2018-12-28 22:25:00 (101378): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2018-12-28 22:25:00 (101378): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2018-12-28 22:25:00 (101378): Guest Log: BIOS: Boot from Hard Disk 0 failed
2018-12-28 22:25:00 (101378): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2018-12-28 22:25:00 (101378): Guest Log: BIOS: Booting from CD-ROM...
2018-12-28 22:26:49 (101378): Guest Log: BIOS: KBD: unsupported int 16h function 03
2018-12-28 22:26:49 (101378): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2018-12-28 22:26:49 (101378): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2018-12-28 22:26:49 (101378): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2018-12-28 22:26:49 (101378): Guest Log: net.ipv4.ip_forward = 1
2018-12-28 22:26:49 (101378): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2018-12-28 22:26:49 (101378): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-12-28 22:26:49 (101378): Guest Log: sysctl: "cannot stat %s" is an unknown key
2018-12-28 22:26:49 (101378): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-12-28 22:26:49 (101378): Guest Log: Segmentation fault
2018-12-28 22:26:49 (101378): Guest Log: automount ...
2018-12-28 22:26:49 (101378): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2018-12-28 22:26:50 (101378): Guest Log: automount over.
2018-12-28 22:26:50 (101378): Guest Log: [1;32mSetting hostname to [1;35mboot2docker[0;39m [1;32mDone.[0;39m
2018-12-28 22:26:50 (101378): Guest Log: Fri Dec 28 22:26:47 UTC 2018 dhcp -------------------------------
2018-12-28 22:26:54 (101378): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2018-12-28 22:26:54 (101378): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1338)
2018-12-28 22:26:56 (101378): Guest Log: Fri Dec 28 22:26:53 UTC 2018 dhcp -------------------------------
2018-12-28 22:26:56 (101378): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2018-12-28 22:26:56 (101378): Guest Log: 00:00:00.000162 main     Log opened 2018-12-28T22:26:53.377124000Z
2018-12-28 22:26:56 (101378): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2018-12-28 22:26:56 (101378): Guest Log: 00:00:00.000162 main     Log opened 2018-12-28T22:26:53.377124000Z
2018-12-28 22:26:56 (101378): Guest Log: 00:00:00.002618 main     OS Product: Linux
2018-12-28 22:26:56 (101378): Guest Log: 00:00:00.002618 main     OS Product: Linux
2018-12-28 22:26:56 (101378): Guest Log: 00:00:00.003450 main     OS Release: 4.1.19-boot2docker
2018-12-28 22:26:56 (101378): Guest Log: 00:00:00.003450 main     OS Release: 4.1.19-boot2docker
2018-12-28 22:26:56 (101378): Guest Log: 00:00:00.004354 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-12-28 22:26:56 (101378): Guest Log: 00:00:00.004415 main     Executable: /sbin/VBoxService
2018-12-28 22:26:56 (101378): Guest Log: 00:00:00.004416 main     Process ID: 856
2018-12-28 22:26:56 (101378): Guest Log: 00:00:00.004417 main     Package type: LINUX_64BITS_GENERIC
2018-12-28 22:26:56 (101378): Guest Log: 00:00:00.004354 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-12-28 22:26:56 (101378): Guest Log: 00:00:00.004415 main     Executable: /sbin/VBoxService
2018-12-28 22:26:56 (101378): Guest Log: 00:00:00.006940 main     5.0.16 r105871 started. Verbose level = 0
2018-12-28 22:26:56 (101378): Guest Log: 00:00:00.004416 main     Process ID: 856
2018-12-28 22:26:56 (101378): Guest Log: 00:00:00.004417 main     Package type: LINUX_64BITS_GENERIC
2018-12-28 22:26:56 (101378): Guest Log: 00:00:00.006940 main     5.0.16 r105871 started. Verbose level = 0
2018-12-28 22:26:56 (101378): Guest Log: 00:00:00.013525 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2018-12-28 22:26:56 (101378): Guest Log: 00:00:00.013632 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2018-12-28 22:26:56 (101378): Guest Log: Mounting BOINC shared/...
2018-12-28 22:26:56 (101378): Guest Log: -------------------
2018-12-28 22:26:56 (101378): Guest Log: Fri Dec 28 22:26:53 UTC 2018
2018-12-28 22:27:45 (101378): Guest Log: 00:00:05.014265 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2018-12-28 22:27:45 (101378): Guest Log: Fri Dec 28 22:27:00 UTC 2018
2018-12-28 22:27:45 (101378): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2018-12-28 22:27:45 (101378): Guest Log:     inet 127.0.0.1/8 scope host lo
2018-12-28 22:27:45 (101378): Guest Log:        valid_lft forever preferred_lft forever
2018-12-28 22:27:45 (101378): Guest Log:     inet6 ::1/128 scope host 
2018-12-28 22:27:45 (101378): Guest Log:        valid_lft forever preferred_lft forever
2018-12-28 22:27:45 (101378): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2018-12-28 22:27:45 (101378): Guest Log:     link/ether 3a:f8:92:2a:d3:87 brd ff:ff:ff:ff:ff:ff
2018-12-28 22:27:45 (101378): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2018-12-28 22:27:45 (101378): Guest Log:     link/ether 08:00:27:b2:9e:7e brd ff:ff:ff:ff:ff:ff
2018-12-28 22:27:45 (101378): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2018-12-28 22:27:45 (101378): Guest Log:        valid_lft forever preferred_lft forever
2018-12-28 22:27:45 (101378): Guest Log:     inet6 fe80::a00:27ff:feb2:9e7e/64 scope link 
2018-12-28 22:27:45 (101378): Guest Log:        valid_lft forever preferred_lft forever
2018-12-28 22:27:45 (101378): Guest Log: -------------------
2018-12-28 22:27:45 (101378): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2018-12-28 22:27:45 (101378): Guest Log: Waiting for Docker daemon to start...
2018-12-28 22:27:45 (101378): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2018-12-28 22:27:45 (101378): Guest Log: Running boinc_app...
2018-12-28 22:27:45 (101378): Guest Log: 00:00:10.015432 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2018-12-28 22:27:45 (101378): Guest Log: Importing Docker image from BOINC...
2018-12-28 22:27:45 (101378): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-12-28 22:27:45 (101378): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /
2018-12-28 22:27:45 (101378): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-12-28 22:27:45 (101378): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-12-28 22:27:45 (101378): Guest Log: shared                  165.3G    107.2G     58.2G  65% /root/shared
2018-12-28 22:27:45 (101378): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /var/lib/docker/aufs
2018-12-28 22:27:57 (101378): Guest Log: doing docker load...
2018-12-28 22:29:19 (101378): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-12-28 22:29:19 (101378): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2018-12-28 22:29:19 (101378): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-12-28 22:29:19 (101378): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-12-28 22:29:19 (101378): Guest Log: shared                  165.3G    103.1G     62.3G  62% /root/shared
2018-12-28 22:29:19 (101378): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /var/lib/docker/aufs
2018-12-28 22:29:19 (101378): Guest Log:               total        used        free      shared  buff/cache   available
2018-12-28 22:29:19 (101378): Guest Log: Mem:           3007          50        2254         663         702        2255
2018-12-28 22:29:19 (101378): Guest Log: Swap:           700           0         700
2018-12-28 22:29:19 (101378): Guest Log: Building apps directory...
2018-12-28 22:57:52 (101378): Guest Log: Prerun diagnostics...
2018-12-28 22:57:53 (101378): Guest Log: REPOSITORY                    TAG                 IMAGE ID            CREATED             SIZE
2018-12-28 22:57:53 (101378): Guest Log: nanohub_apps_share64_matlab   4                   32c863520615        12 months ago       488.2 MB
2018-12-28 22:57:53 (101378): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2018-12-28 22:57:53 (101378): Guest Log: 499.0M	/var/lib/docker
2018-12-28 22:57:53 (101378): Guest Log: Swap:           700           0         700
2018-12-28 22:57:53 (101378): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2018-12-28 22:57:53 (101378): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2018-12-28 22:57:53 (101378): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2018-12-28 22:57:53 (101378): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2018-12-28 22:57:53 (101378): Guest Log: shared                  165.3G    117.5G     47.9G  71% /root/shared
2018-12-28 22:57:53 (101378): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /var/lib/docker/aufs
2018-12-28 22:57:53 (101378): Guest Log: Running... 
2018-12-28 22:57:53 (101378): Guest Log: 07005416_137.boinc
2018-12-28 22:57:53 (101378): Guest Log: 07005416_137.sh
2018-12-28 23:00:05 (101378): Guest Log: boinc_app exited (0)
2018-12-28 23:00:05 (101378): Guest Log: Saving results...
2018-12-28 23:00:05 (101378): Guest Log: 07005416_137_output.tar.gz
2018-12-28 23:00:05 (101378): VM Completion File Detected.
2018-12-28 23:00:05 (101378): Powering off VM.
2018-12-28 23:00:06 (101378): Successfully stopped VM.
2018-12-28 23:00:06 (101378): Deregistering VM. (boinc_9efcbd096cdb779f, slot#87)
2018-12-28 23:00:06 (101378): Removing network bandwidth throttle group from VM.
2018-12-28 23:00:06 (101378): Removing storage controller(s) from VM.
2018-12-28 23:00:06 (101378): Removing VM from VirtualBox.
2018-12-28 23:00:07 (101378): Removing virtual ISO 9660 disk from VirtualBox.
23:00:12 (101378): called boinc_finish(0)

</stderr_txt>
]]>