Task 5230632

Name 07489653_003_0
Workunit 4239821
Created 16 Sep 2019, 9:23:26 UTC
Sent 16 Sep 2019, 9:45:57 UTC
Report deadline 21 Sep 2019, 9:45:57 UTC
Received 16 Sep 2019, 13:52:27 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 3145
Run time 3 min 26 sec
CPU time 2 min 20 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 2.55 GFLOPS
Application version boinc2docker v1.12 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 1.84 GB
Peak swap size 3.59 GB
Peak disk usage 501.61 MB

Stderr output

<core_client_version>7.9.2</core_client_version>
<![CDATA[
<stderr_txt>
2019-09-16 08:47:47 (11071): vboxwrapper (7.7.26197): starting
2019-09-16 08:47:47 (11071): Feature: Checkpoint interval offset (60 seconds)
2019-09-16 08:47:47 (11071): Detected: VirtualBox VboxManage Interface (Version: 5.2.32)
2019-09-16 08:47:47 (11071): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-09-16 08:47:47 (11071): Create VM. (boinc_38860cd1d8ee0641, slot#1)
2019-09-16 08:47:47 (11071): Updating drive controller type and model for desired configuration.
2019-09-16 08:47:47 (11071): Setting Memory Size for VM. (3072MB)
2019-09-16 08:47:47 (11071): Setting CPU Count for VM. (1)
2019-09-16 08:47:48 (11071): Setting Chipset Options for VM.
2019-09-16 08:47:48 (11071): Setting Boot Options for VM.
2019-09-16 08:47:48 (11071): Setting Network Configuration for NAT.
2019-09-16 08:47:48 (11071): Enabling VM Network Access.
2019-09-16 08:47:48 (11071): Disabling USB Support for VM.
2019-09-16 08:47:49 (11071): Disabling COM Port Support for VM.
2019-09-16 08:47:51 (11071): Disabling LPT Port Support for VM.
2019-09-16 08:47:52 (11071): Disabling Audio Support for VM.
2019-09-16 08:47:53 (11071): Disabling Clipboard Support for VM.
2019-09-16 08:47:53 (11071): Disabling Drag and Drop Support for VM.
2019-09-16 08:47:53 (11071): Adding storage controller(s) to VM.
2019-09-16 08:47:55 (11071): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2019-09-16 08:47:58 (11071): Adding VirtualBox Guest Additions to VM.
2019-09-16 08:47:58 (11071): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-09-16 08:48:01 (11071): Enabling shared directory for VM.
2019-09-16 08:48:06 (11071): Starting VM. (boinc_38860cd1d8ee0641, slot#1)
2019-09-16 08:48:09 (11071): Successfully started VM. (PID = '12011')
2019-09-16 08:48:09 (11071): Reporting VM Process ID to BOINC.
2019-09-16 08:48:09 (11071): Guest Log: BIOS: VirtualBox 5.2.32
2019-09-16 08:48:09 (11071): Guest Log: CPUID EDX: 0x078bfbff
2019-09-16 08:48:09 (11071): VM state change detected. (old = 'poweroff', new = 'running')
2019-09-16 08:48:09 (11071): Preference change detected
2019-09-16 08:48:09 (11071): Setting CPU throttle for VM. (100%)
2019-09-16 08:48:18 (11071): Setting checkpoint interval to 3000 seconds. (Higher value of (Preference: 3000 seconds) or (Vbox_job.xml: 600 seconds))
2019-09-16 08:48:19 (11071): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-09-16 08:48:19 (11071): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2019-09-16 08:48:19 (11071): Guest Log: BIOS: Boot from Hard Disk 0 failed
2019-09-16 08:48:19 (11071): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2019-09-16 08:48:19 (11071): Guest Log: BIOS: Booting from CD-ROM...
2019-09-16 08:48:21 (11071): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-09-16 08:48:21 (11071): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2019-09-16 08:48:33 (11071): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-09-16 08:48:33 (11071): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-09-16 08:48:34 (11071): Guest Log: net.ipv4.ip_forward = 1
2019-09-16 08:48:34 (11071): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2019-09-16 08:48:34 (11071): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-09-16 08:48:34 (11071): Guest Log: sysctl: "cannot stat %s" is an unknown key
2019-09-16 08:48:34 (11071): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-09-16 08:48:34 (11071): Guest Log: Segmentation fault
2019-09-16 08:48:35 (11071): Guest Log: automount ...
2019-09-16 08:48:35 (11071): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2019-09-16 08:48:35 (11071): Guest Log: automount over.
2019-09-16 08:48:35 (11071): Guest Log: Setting hostname to boot2docker Done.
2019-09-16 08:48:35 (11071): Guest Log: Mon Sep 16 08:48:32 UTC 2019 dhcp -------------------------------
2019-09-16 08:48:40 (11071): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2019-09-16 08:48:40 (11071): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1338)
2019-09-16 08:48:41 (11071): Guest Log: Mon Sep 16 08:48:38 UTC 2019 dhcp -------------------------------
2019-09-16 08:48:42 (11071): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-09-16 08:48:42 (11071): Guest Log: 00:00:00.000197 main     Log opened 2019-09-16T08:48:39.710488000Z
2019-09-16 08:48:42 (11071): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-09-16 08:48:42 (11071): Guest Log: 00:00:00.000197 main     Log opened 2019-09-16T08:48:39.710488000Z
2019-09-16 08:48:42 (11071): Guest Log: 00:00:00.002648 main     OS Product: Linux
2019-09-16 08:48:42 (11071): Guest Log: 00:00:00.002648 main     OS Product: Linux
2019-09-16 08:48:42 (11071): Guest Log: 00:00:00.003477 main     OS Release: 4.1.19-boot2docker
2019-09-16 08:48:42 (11071): Guest Log: 00:00:00.003477 main     OS Release: 4.1.19-boot2docker
2019-09-16 08:48:42 (11071): Guest Log: 00:00:00.004479 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-09-16 08:48:42 (11071): Guest Log: 00:00:00.004534 main     Executable: /sbin/VBoxService
2019-09-16 08:48:42 (11071): Guest Log: 00:00:00.004540 main     Process ID: 793
2019-09-16 08:48:42 (11071): Guest Log: 00:00:00.004542 main     Package type: LINUX_64BITS_GENERIC
2019-09-16 08:48:42 (11071): Guest Log: 00:00:00.004479 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-09-16 08:48:42 (11071): Guest Log: 00:00:00.004534 main     Executable: /sbin/VBoxService
2019-09-16 08:48:42 (11071): Guest Log: 00:00:00.004540 main     Process ID: 793
2019-09-16 08:48:42 (11071): Guest Log: 00:00:00.004542 main     Package type: LINUX_64BITS_GENERIC
2019-09-16 08:48:42 (11071): Guest Log: 00:00:00.009036 main     5.0.16 r105871 started. Verbose level = 0
2019-09-16 08:48:42 (11071): Guest Log: 00:00:00.012994 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2019-09-16 08:48:42 (11071): Guest Log: 00:00:00.013167 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2019-09-16 08:48:42 (11071): Guest Log: 00:00:00.009036 main     5.0.16 r105871 started. Verbose level = 0
2019-09-16 08:48:42 (11071): Guest Log: Mounting BOINC shared/...
2019-09-16 08:48:42 (11071): Guest Log: -------------------
2019-09-16 08:48:42 (11071): Guest Log: Mon Sep 16 13:48:41 UTC 2019
2019-09-16 08:48:47 (11071): Guest Log: 00:00:05.015575 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2019-09-16 08:48:47 (11071): Guest Log: Mon Sep 16 13:49:45 UTC 2019
2019-09-16 08:48:47 (11071): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2019-09-16 08:48:47 (11071): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2019-09-16 08:48:47 (11071): Guest Log:     inet 127.0.0.1/8 scope host lo
2019-09-16 08:48:47 (11071): Guest Log:        valid_lft forever preferred_lft forever
2019-09-16 08:48:47 (11071): Guest Log:     inet6 ::1/128 scope host 
2019-09-16 08:48:47 (11071): Guest Log:        valid_lft forever preferred_lft forever
2019-09-16 08:48:47 (11071): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2019-09-16 08:48:47 (11071): Guest Log:     link/ether 4a:fc:d8:c8:48:b8 brd ff:ff:ff:ff:ff:ff
2019-09-16 08:48:47 (11071): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2019-09-16 08:48:47 (11071): Guest Log:     link/ether 08:00:27:06:40:f7 brd ff:ff:ff:ff:ff:ff
2019-09-16 08:48:47 (11071): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2019-09-16 08:48:47 (11071): Guest Log:        valid_lft forever preferred_lft forever
2019-09-16 08:48:47 (11071): Guest Log:     inet6 fe80::a00:27ff:fe06:40f7/64 scope link 
2019-09-16 08:48:47 (11071): Guest Log:        valid_lft forever preferred_lft forever
2019-09-16 08:48:47 (11071): Guest Log: -------------------
2019-09-16 08:48:47 (11071): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2019-09-16 08:48:47 (11071): Guest Log: Waiting for Docker daemon to start...
2019-09-16 08:48:48 (11071): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2019-09-16 08:48:48 (11071): Guest Log: Running boinc_app...
2019-09-16 08:48:48 (11071): Guest Log: Importing Docker image from BOINC...
2019-09-16 08:48:48 (11071): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-09-16 08:48:48 (11071): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /
2019-09-16 08:48:48 (11071): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-09-16 08:48:48 (11071): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-09-16 08:48:48 (11071): Guest Log: shared                   64.0G     26.4G     37.7G  41% /root/shared
2019-09-16 08:48:48 (11071): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /var/lib/docker/aufs
2019-09-16 08:48:52 (11071): Guest Log: 00:00:10.016984 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2019-09-16 08:48:59 (11071): Guest Log: doing docker load...
2019-09-16 08:49:20 (11071): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-09-16 08:49:20 (11071): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2019-09-16 08:49:20 (11071): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-09-16 08:49:20 (11071): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-09-16 08:49:20 (11071): Guest Log: shared                   64.0G     26.2G     37.9G  41% /root/shared
2019-09-16 08:49:20 (11071): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /var/lib/docker/aufs
2019-09-16 08:49:20 (11071): Guest Log:               total        used        free      shared  buff/cache   available
2019-09-16 08:49:20 (11071): Guest Log: Mem:           3007          49        2255         663         702        2256
2019-09-16 08:49:20 (11071): Guest Log: Swap:           701           0         701
2019-09-16 08:49:20 (11071): Guest Log: Building apps directory...
2019-09-16 08:50:40 (11071): Guest Log: Prerun diagnostics...
2019-09-16 08:50:40 (11071): Guest Log: REPOSITORY                    TAG                 IMAGE ID            CREATED             SIZE
2019-09-16 08:50:40 (11071): Guest Log: nanohub_apps_share64_matlab   4                   32c863520615        21 months ago       488.2 MB
2019-09-16 08:50:40 (11071): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2019-09-16 08:50:40 (11071): Guest Log: 499.0M	/var/lib/docker
2019-09-16 08:50:40 (11071): Guest Log:               total        used        free      shared  buff/cache   available
2019-09-16 08:50:40 (11071): Guest Log: Mem:           3007          53        2240         663         713        2250
2019-09-16 08:50:40 (11071): Guest Log: Swap:           701           0         701
2019-09-16 08:50:40 (11071): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-09-16 08:50:40 (11071): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2019-09-16 08:50:40 (11071): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-09-16 08:50:40 (11071): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-09-16 08:50:40 (11071): Guest Log: shared                   64.0G     28.0G     36.0G  44% /root/shared
2019-09-16 08:50:40 (11071): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /var/lib/docker/aufs
2019-09-16 08:50:40 (11071): Guest Log: Running... 
2019-09-16 08:50:40 (11071): Guest Log: 07489653_003.boinc
2019-09-16 08:50:40 (11071): Guest Log: 07489653_003.sh
2019-09-16 08:51:05 (11071): Guest Log: boinc_app exited (0)
2019-09-16 08:51:05 (11071): Guest Log: Saving results...
2019-09-16 08:51:05 (11071): Guest Log: 07489653_003_output.tar.gz
2019-09-16 08:51:05 (11071): VM Completion File Detected.
2019-09-16 08:51:05 (11071): Powering off VM.
2019-09-16 08:51:05 (11071): Successfully stopped VM.
2019-09-16 08:51:05 (11071): Deregistering VM. (boinc_38860cd1d8ee0641, slot#1)
2019-09-16 08:51:05 (11071): Removing network bandwidth throttle group from VM.
2019-09-16 08:51:05 (11071): Removing storage controller(s) from VM.
2019-09-16 08:51:06 (11071): Removing VM from VirtualBox.
2019-09-16 08:51:06 (11071): Removing virtual ISO 9660 disk from VirtualBox.
08:51:11 (11071): called boinc_finish(0)

</stderr_txt>
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