Task 546933
| Name | 07021772_243_0 |
| Workunit | 311569 |
| Created | 16 Jan 2019, 10:35:03 UTC |
| Sent | 16 Jan 2019, 15:37:18 UTC |
| Report deadline | 18 Jan 2019, 15:37:18 UTC |
| Received | 16 Jan 2019, 20:13:46 UTC |
| Server state | Over |
| Outcome | Computation error |
| Client state | Compute error |
| Exit status | 194 (0x000000C2) EXIT_ABORTED_BY_CLIENT |
| Computer ID | 843 |
| Run time | 10 min 6 sec |
| CPU time | 7 min 5 sec |
| Validate state | Invalid |
| Credit | 0.00 |
| Device peak FLOPS | 3.41 GFLOPS |
| Application version | boinc2docker v1.12 (vbox64_mt) x86_64-apple-darwin |
| Peak working set size | 1.89 GB |
| Peak swap size | 10.49 GB |
| Peak disk usage | 1.38 GB |
Stderr output
<core_client_version>7.14.2</core_client_version>
<![CDATA[
<message>
finish file present too long</message>
<stderr_txt>
2019-01-16 17:32:05 (57171): vboxwrapper (7.7.26199): starting
2019-01-16 17:32:05 (57171): Feature: Checkpoint interval offset (268 seconds)
2019-01-16 17:32:05 (57171): Detected: VirtualBox VboxManage Interface (Version: 5.2.22)
2019-01-16 17:32:05 (57171): Detected: Sandbox Configuration Enabled
2019-01-16 17:32:06 (57171): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-01-16 17:32:06 (57171): Create VM. (boinc_762ef6dbc4c2ce59, slot#53)
2019-01-16 17:32:06 (57171): Updating drive controller type and model for desired configuration.
2019-01-16 17:32:06 (57171): Setting Memory Size for VM. (3072MB)
2019-01-16 17:32:07 (57171): Setting CPU Count for VM. (1)
2019-01-16 17:32:07 (57171): Setting Chipset Options for VM.
2019-01-16 17:32:07 (57171): Setting Boot Options for VM.
2019-01-16 17:32:07 (57171): Setting Network Configuration for NAT.
2019-01-16 17:32:07 (57171): Enabling VM Network Access.
2019-01-16 17:32:08 (57171): Disabling USB Support for VM.
2019-01-16 17:32:08 (57171): Disabling COM Port Support for VM.
2019-01-16 17:32:08 (57171): Disabling Audio Support for VM.
2019-01-16 17:32:09 (57171): Disabling Clipboard Support for VM.
2019-01-16 17:32:09 (57171): Disabling Drag and Drop Support for VM.
2019-01-16 17:32:09 (57171): Adding storage controller(s) to VM.
2019-01-16 17:32:09 (57171): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2019-01-16 17:32:10 (57171): Adding VirtualBox Guest Additions to VM.
2019-01-16 17:32:10 (57171): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-01-16 17:32:10 (57171): Enabling shared directory for VM.
2019-01-16 17:32:11 (57171): Starting VM. (boinc_762ef6dbc4c2ce59, slot#53)
2019-01-16 17:32:14 (57171): Successfully started VM. (PID = '57398')
2019-01-16 17:32:14 (57171): Reporting VM Process ID to BOINC.
2019-01-16 17:32:16 (57171): Guest Log: BIOS: VirtualBox 5.2.22
2019-01-16 17:32:16 (57171): Guest Log: CPUID EDX: 0x078bfbff
2019-01-16 17:32:18 (57171): VM state change detected. (old = 'poweroff', new = 'running')
2019-01-16 17:32:18 (57171): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-01-16 17:32:18 (57171): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2019-01-16 17:32:18 (57171): Guest Log: BIOS: Boot from Hard Disk 0 failed
2019-01-16 17:32:18 (57171): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2019-01-16 17:32:18 (57171): Guest Log: BIOS: Booting from CD-ROM...
2019-01-16 17:32:18 (57171): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-01-16 17:32:18 (57171): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000
2019-01-16 17:32:20 (57171): Preference change detected
2019-01-16 17:32:20 (57171): Setting CPU throttle for VM. (100%)
2019-01-16 17:32:20 (57171): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2019-01-16 17:32:38 (57171): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-01-16 17:32:38 (57171): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-01-16 17:32:38 (57171): Guest Log: net.ipv4.ip_forward = 1
2019-01-16 17:32:38 (57171): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2019-01-16 17:32:38 (57171): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-01-16 17:32:38 (57171): Guest Log: sysctl: "cannot stat %s" is an unknown key
2019-01-16 17:32:38 (57171): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-01-16 17:32:38 (57171): Guest Log: Segmentation fault
2019-01-16 17:32:38 (57171): Guest Log: automount ...
2019-01-16 17:32:38 (57171): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2019-01-16 17:32:38 (57171): Guest Log: automount over.
2019-01-16 17:32:38 (57171): Guest Log: [1;32mSetting hostname to [1;35mboot2docker[0;39m [1;32mDone.[0;39m
2019-01-16 17:32:38 (57171): Guest Log: Wed Jan 16 17:32:35 UTC 2019 dhcp -------------------------------
2019-01-16 17:32:44 (57171): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1079)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00 (1304)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXCPU:00 (1305)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00 (1306)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0 (1307)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0/event0 (1308)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00 (1309)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1 (1310)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1/event1 (1311)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00 (1312)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00 (1313)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00 (1314)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00/power_supply/AC (1315)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00 (1316)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/device:01 (1317)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6 (1318)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6/event5 (1319)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1320)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1321)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1322)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1323)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1324)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1325)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1326)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1327)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1328)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00 (1329)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1330)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1331)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1332)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1333)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1334)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1335)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1336)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1337)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1338)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:02 (1339)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1340)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1341)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1342)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1343)
2019-01-16 17:32:44 (57171): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:01 (1344)
2019-01-16 17:32:44 (57171): Guest Log: Wed Jan 16 17:32:42 UTC 2019 dhcp -------------------------------
2019-01-16 17:32:44 (57171): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log
2019-01-16 17:32:44 (57171): Guest Log: 00:00:00.000213 main Log opened 2019-01-16T17:32:42.104066000Z
2019-01-16 17:32:44 (57171): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log
2019-01-16 17:32:44 (57171): Guest Log: 00:00:00.004991 main OS Product: Linux
2019-01-16 17:32:44 (57171): Guest Log: 00:00:00.005173 main OS Release: 4.1.19-boot2docker
2019-01-16 17:32:44 (57171): Guest Log: 00:00:00.005272 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-01-16 17:32:44 (57171): Guest Log: 00:00:00.005378 main Executable: /sbin/VBoxService
2019-01-16 17:32:44 (57171): Guest Log: 00:00:00.005381 main Process ID: 797
2019-01-16 17:32:44 (57171): Guest Log: 00:00:00.005383 main Package type: LINUX_64BITS_GENERIC
2019-01-16 17:32:44 (57171): Guest Log: 00:00:00.000213 main Log opened 2019-01-16T17:32:42.104066000Z
2019-01-16 17:32:44 (57171): Guest Log: 00:00:00.004991 main OS Product: Linux
2019-01-16 17:32:44 (57171): Guest Log: 00:00:00.015347 main 5.0.16 r105871 started. Verbose level = 0
2019-01-16 17:32:44 (57171): Guest Log: 00:00:00.024720 vminfo rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2019-01-16 17:32:44 (57171): Guest Log: 00:00:00.024889 vminfo Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2019-01-16 17:32:44 (57171): Guest Log: 00:00:00.005173 main OS Release: 4.1.19-boot2docker
2019-01-16 17:32:44 (57171): Guest Log: 00:00:00.005272 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-01-16 17:32:44 (57171): Guest Log: 00:00:00.005378 main Executable: /sbin/VBoxService
2019-01-16 17:32:44 (57171): Guest Log: 00:00:00.005381 main Process ID: 797
2019-01-16 17:32:44 (57171): Guest Log: 00:00:00.005383 main Package type: LINUX_64BITS_GENERIC
2019-01-16 17:32:44 (57171): Guest Log: 00:00:00.015347 main 5.0.16 r105871 started. Verbose level = 0
2019-01-16 17:32:44 (57171): Guest Log: Mounting BOINC shared/...
2019-01-16 17:32:44 (57171): Guest Log: -------------------
2019-01-16 17:32:44 (57171): Guest Log: Wed Jan 16 16:32:44 UTC 2019
2019-01-16 17:32:51 (57171): Guest Log: 00:00:05.037136 vminfo Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2019-01-16 17:32:51 (57171): Guest Log: Wed Jan 16 16:32:49 UTC 2019
2019-01-16 17:32:51 (57171): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default
2019-01-16 17:32:51 (57171): Guest Log: link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2019-01-16 17:32:51 (57171): Guest Log: inet 127.0.0.1/8 scope host lo
2019-01-16 17:32:51 (57171): Guest Log: valid_lft forever preferred_lft forever
2019-01-16 17:32:51 (57171): Guest Log: inet6 ::1/128 scope host
2019-01-16 17:32:51 (57171): Guest Log: valid_lft forever preferred_lft forever
2019-01-16 17:32:51 (57171): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default
2019-01-16 17:32:51 (57171): Guest Log: link/ether de:a7:a9:aa:ca:5d brd ff:ff:ff:ff:ff:ff
2019-01-16 17:32:51 (57171): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2019-01-16 17:32:51 (57171): Guest Log: link/ether 08:00:27:e8:6d:95 brd ff:ff:ff:ff:ff:ff
2019-01-16 17:32:51 (57171): Guest Log: inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2019-01-16 17:32:51 (57171): Guest Log: valid_lft forever preferred_lft forever
2019-01-16 17:32:51 (57171): Guest Log: inet6 fe80::a00:27ff:fee8:6d95/64 scope link
2019-01-16 17:32:51 (57171): Guest Log: valid_lft forever preferred_lft forever
2019-01-16 17:32:51 (57171): Guest Log: -------------------
2019-01-16 17:32:51 (57171): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2019-01-16 17:32:51 (57171): Guest Log: Waiting for Docker daemon to start...
2019-01-16 17:32:51 (57171): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE
2019-01-16 17:32:51 (57171): Guest Log: Running boinc_app...
2019-01-16 17:32:51 (57171): Guest Log: Importing Docker image from BOINC...
2019-01-16 17:32:51 (57171): Guest Log: Filesystem Size Used Available Use% Mounted on
2019-01-16 17:32:51 (57171): Guest Log: tmpfs 2.6G 164.2M 2.5G 6% /
2019-01-16 17:32:51 (57171): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2019-01-16 17:32:51 (57171): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2019-01-16 17:32:51 (57171): Guest Log: shared 310.0G 69.0G 240.9G 22% /root/shared
2019-01-16 17:32:51 (57171): Guest Log: tmpfs 2.6G 164.2M 2.5G 6% /var/lib/docker/aufs
2019-01-16 17:32:56 (57171): Guest Log: 00:00:10.039267 vminfo Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2019-01-16 17:33:12 (57171): Guest Log: doing docker load...
2019-01-16 17:33:43 (57171): Guest Log: Filesystem Size Used Available Use% Mounted on
2019-01-16 17:33:43 (57171): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /
2019-01-16 17:33:43 (57171): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2019-01-16 17:33:43 (57171): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2019-01-16 17:33:43 (57171): Guest Log: shared 310.0G 68.1G 241.9G 22% /root/shared
2019-01-16 17:33:43 (57171): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /var/lib/docker/aufs
2019-01-16 17:33:43 (57171): Guest Log: total used free shared buff/cache available
2019-01-16 17:33:43 (57171): Guest Log: Mem: 3007 50 2255 663 701 2255
2019-01-16 17:33:43 (57171): Guest Log: Swap: 701 0 701
2019-01-16 17:33:43 (57171): Guest Log: Building apps directory...
2019-01-16 17:44:43 (57171): Guest Log: Prerun diagnostics...
2019-01-16 17:44:43 (57171): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE
2019-01-16 17:44:43 (57171): Guest Log: nanohub_apps_share64_matlab 4 32c863520615 13 months ago 488.2 MB
2019-01-16 17:44:43 (57171): Guest Log: CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
2019-01-16 17:44:43 (57171): Guest Log: 499.0M /var/lib/docker
2019-01-16 17:44:43 (57171): Guest Log: total used free shared buff/cache available
2019-01-16 17:44:43 (57171): Guest Log: Mem: 3007 38 2255 663 713 2265
2019-01-16 17:44:43 (57171): Guest Log: Swap: 701 0 701
2019-01-16 17:44:44 (57171): Guest Log: Filesystem Size Used Available Use% Mounted on
2019-01-16 17:44:44 (57171): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /
2019-01-16 17:44:44 (57171): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2019-01-16 17:44:44 (57171): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2019-01-16 17:44:44 (57171): Guest Log: shared 310.0G 73.8G 236.2G 24% /root/shared
2019-01-16 17:44:44 (57171): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /var/lib/docker/aufs
2019-01-16 17:44:44 (57171): Guest Log: Running...
2019-01-16 17:44:45 (57171): Guest Log: 07021772_243.boinc
2019-01-16 17:44:45 (57171): Guest Log: 07021772_243.sh
2019-01-16 17:52:56 (57171): Guest Log: boinc_app exited (0)
2019-01-16 17:52:56 (57171): Guest Log: Saving results...
2019-01-16 17:52:56 (57171): Guest Log: 07021772_243_output.tar.gz
2019-01-16 17:52:58 (57171): VM Completion File Detected.
2019-01-16 17:52:58 (57171): Powering off VM.
2019-01-16 17:53:00 (57171): Successfully stopped VM.
2019-01-16 17:53:00 (57171): Deregistering VM. (boinc_762ef6dbc4c2ce59, slot#53)
2019-01-16 17:53:00 (57171): Removing network bandwidth throttle group from VM.
2019-01-16 17:53:00 (57171): Removing storage controller(s) from VM.
2019-01-16 17:53:01 (57171): Removing VM from VirtualBox.
2019-01-16 17:53:02 (57171): Removing virtual ISO 9660 disk from VirtualBox.
17:53:07 (57171): called boinc_finish(0)
</stderr_txt>
]]>
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