Task 5981747

Name 07513856_038_0
Workunit 4879654
Created 6 Oct 2019, 10:27:28 UTC
Sent 6 Oct 2019, 10:27:37 UTC
Report deadline 11 Oct 2019, 10:27:37 UTC
Received 6 Oct 2019, 10:56:13 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 194 (0x000000C2) EXIT_ABORTED_BY_CLIENT
Computer ID 3706
Run time 3 min 13 sec
CPU time 1 min 28 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 5.03 GFLOPS
Application version boinc2docker v1.12 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 1.89 GB
Peak swap size 3.51 GB
Peak disk usage 837.05 MB

Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<message>
finish file present too long</message>
<stderr_txt>
2019-10-06 11:39:08 (71013): vboxwrapper (7.7.26197): starting
2019-10-06 11:39:08 (71013): Feature: Checkpoint interval offset (356 seconds)
2019-10-06 11:39:08 (71013): Detected: VirtualBox VboxManage Interface (Version: 5.2.32)
2019-10-06 11:39:08 (71013): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-10-06 11:39:08 (71013): Create VM. (boinc_c7fb1d1de90203f7, slot#32)
2019-10-06 11:39:08 (71013): Updating drive controller type and model for desired configuration.
2019-10-06 11:39:09 (71013): Setting Memory Size for VM. (3072MB)
2019-10-06 11:39:09 (71013): Setting CPU Count for VM. (1)
2019-10-06 11:39:10 (71013): Setting Chipset Options for VM.
2019-10-06 11:39:10 (71013): Setting Boot Options for VM.
2019-10-06 11:39:10 (71013): Setting Network Configuration for NAT.
2019-10-06 11:39:10 (71013): Enabling VM Network Access.
2019-10-06 11:39:10 (71013): Disabling USB Support for VM.
2019-10-06 11:39:10 (71013): Disabling COM Port Support for VM.
2019-10-06 11:39:11 (71013): Disabling LPT Port Support for VM.
2019-10-06 11:39:11 (71013): Disabling Audio Support for VM.
2019-10-06 11:39:11 (71013): Disabling Clipboard Support for VM.
2019-10-06 11:39:11 (71013): Disabling Drag and Drop Support for VM.
2019-10-06 11:39:12 (71013): Adding storage controller(s) to VM.
2019-10-06 11:39:12 (71013): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2019-10-06 11:39:12 (71013): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-10-06 11:39:12 (71013): Enabling shared directory for VM.
2019-10-06 11:39:12 (71013): Starting VM. (boinc_c7fb1d1de90203f7, slot#32)
2019-10-06 11:39:14 (71013): Successfully started VM. (PID = '72237')
2019-10-06 11:39:14 (71013): Reporting VM Process ID to BOINC.
2019-10-06 11:39:14 (71013): Guest Log: BIOS: VirtualBox 5.2.32
2019-10-06 11:39:14 (71013): Guest Log: CPUID EDX: 0x078bfbff
2019-10-06 11:39:14 (71013): VM state change detected. (old = 'poweroff', new = 'running')
2019-10-06 11:39:14 (71013): Preference change detected
2019-10-06 11:39:14 (71013): Setting CPU throttle for VM. (100%)
2019-10-06 11:39:14 (71013): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 600 seconds))
2019-10-06 11:39:16 (71013): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-10-06 11:39:16 (71013): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2019-10-06 11:39:16 (71013): Guest Log: BIOS: Boot from Hard Disk 0 failed
2019-10-06 11:39:16 (71013): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2019-10-06 11:39:16 (71013): Guest Log: BIOS: Booting from CD-ROM...
2019-10-06 11:39:18 (71013): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-10-06 11:39:26 (71013): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-10-06 11:39:26 (71013): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-10-06 11:39:27 (71013): Guest Log: net.ipv4.ip_forward = 1
2019-10-06 11:39:27 (71013): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2019-10-06 11:39:27 (71013): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-10-06 11:39:27 (71013): Guest Log: sysctl: "cannot stat %s" is an unknown key
2019-10-06 11:39:27 (71013): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-10-06 11:39:27 (71013): Guest Log: Segmentation fault
2019-10-06 11:39:27 (71013): Guest Log: automount ...
2019-10-06 11:39:27 (71013): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2019-10-06 11:39:27 (71013): Guest Log: automount over.
2019-10-06 11:39:27 (71013): Guest Log: Setting hostname to boot2docker Done.
2019-10-06 11:39:32 (71013): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1064)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00 (1282)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:00 (1283)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00 (1284)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0 (1285)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0/event0 (1286)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00 (1287)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1 (1288)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1/event1 (1289)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00 (1290)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00 (1291)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00 (1292)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00/power_supply/AC (1293)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00 (1294)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/device:01 (1295)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6 (1296)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6/event5 (1297)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1298)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1299)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1300)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1301)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1302)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1303)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1304)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1305)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1306)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00 (1307)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1308)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1309)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1310)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1311)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1312)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1313)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1314)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1315)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1316)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:02 (1317)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1318)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1319)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1320)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1321)
2019-10-06 11:39:32 (71013): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:01 (1322)
2019-10-06 11:39:33 (71013): Guest Log: Sun Oct  6 11:39:30 UTC 2019 dhcp -------------------------------
2019-10-06 11:39:33 (71013): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-10-06 11:39:33 (71013): Guest Log: 00:00:00.000105 main     Log opened 2019-10-06T11:39:30.556129000Z
2019-10-06 11:39:33 (71013): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-10-06 11:39:33 (71013): Guest Log: 00:00:00.000105 main     Log opened 2019-10-06T11:39:30.556129000Z
2019-10-06 11:39:33 (71013): Guest Log: 00:00:00.013242 main     OS Product: Linux
2019-10-06 11:39:33 (71013): Guest Log: 00:00:00.013242 main     OS Product: Linux
2019-10-06 11:39:33 (71013): Guest Log: 00:00:00.013930 main     OS Release: 4.1.19-boot2docker
2019-10-06 11:39:33 (71013): Guest Log: 00:00:00.013930 main     OS Release: 4.1.19-boot2docker
2019-10-06 11:39:33 (71013): Guest Log: 00:00:00.014647 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-10-06 11:39:33 (71013): Guest Log: 00:00:00.014687 main     Executable: /sbin/VBoxService
2019-10-06 11:39:33 (71013): Guest Log: 00:00:00.014688 main     Process ID: 808
2019-10-06 11:39:33 (71013): Guest Log: 00:00:00.014689 main     Package type: LINUX_64BITS_GENERIC
2019-10-06 11:39:33 (71013): Guest Log: 00:00:00.014647 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-10-06 11:39:33 (71013): Guest Log: 00:00:00.014687 main     Executable: /sbin/VBoxService
2019-10-06 11:39:33 (71013): Guest Log: 00:00:00.014688 main     Process ID: 808
2019-10-06 11:39:33 (71013): Guest Log: 00:00:00.014689 main     Package type: LINUX_64BITS_GENERIC
2019-10-06 11:39:33 (71013): Guest Log: 00:00:00.018082 main     5.0.16 r105871 started. Verbose level = 0
2019-10-06 11:39:33 (71013): Guest Log: 00:00:00.00:00:00.020938 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2019-10-06 11:39:33 (71013): Guest Log: 00:00:00.021009 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2019-10-06 11:39:33 (71013): Guest Log: 018082 main     5.0.16 r105871 started. Verbose level = 0
2019-10-06 11:39:33 (71013): Guest Log: Mounting BOINC shared/...
2019-10-06 11:39:33 (71013): Guest Log: -------------------
2019-10-06 11:39:33 (71013): Guest Log: Sun Oct  6 10:39:33 UTC 2019
2019-10-06 11:39:38 (71013): Guest Log: 00:00:05.021444 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2019-10-06 11:39:39 (71013): Guest Log: Sun Oct  6 10:39:38 UTC 2019
2019-10-06 11:39:39 (71013): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2019-10-06 11:39:39 (71013): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2019-10-06 11:39:39 (71013): Guest Log:     inet 127.0.0.1/8 scope host lo
2019-10-06 11:39:39 (71013): Guest Log:        valid_lft forever preferred_lft forever
2019-10-06 11:39:39 (71013): Guest Log:     inet6 ::1/128 scope host 
2019-10-06 11:39:39 (71013): Guest Log:        valid_lft forever preferred_lft forever
2019-10-06 11:39:39 (71013): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2019-10-06 11:39:39 (71013): Guest Log:     link/ether c6:d7:7c:35:0c:0c brd ff:ff:ff:ff:ff:ff
2019-10-06 11:39:39 (71013): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2019-10-06 11:39:39 (71013): Guest Log:     link/ether 08:00:27:9c:e4:b8 brd ff:ff:ff:ff:ff:ff
2019-10-06 11:39:39 (71013): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2019-10-06 11:39:39 (71013): Guest Log:        valid_lft forever preferred_lft forever
2019-10-06 11:39:39 (71013): Guest Log:     inet6 fe80::a00:27ff:fe9c:e4b8/64 scope link 
2019-10-06 11:39:39 (71013): Guest Log:        valid_lft forever preferred_lft forever
2019-10-06 11:39:39 (71013): Guest Log: -------------------
2019-10-06 11:39:39 (71013): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2019-10-06 11:39:39 (71013): Guest Log: Waiting for Docker daemon to start...
2019-10-06 11:39:40 (71013): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2019-10-06 11:39:40 (71013): Guest Log: Running boinc_app...
2019-10-06 11:39:40 (71013): Guest Log: Importing Docker image from BOINC...
2019-10-06 11:39:40 (71013): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-10-06 11:39:40 (71013): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /
2019-10-06 11:39:40 (71013): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-10-06 11:39:40 (71013): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-10-06 11:39:40 (71013): Guest Log: shared                  221.3G     42.8G    178.4G  19% /root/shared
2019-10-06 11:39:40 (71013): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /var/lib/docker/aufs
2019-10-06 11:39:43 (71013): Guest Log: 00:00:10.022269 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2019-10-06 11:39:48 (71013): Guest Log: doing docker load...
2019-10-06 11:39:57 (71013): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-10-06 11:39:57 (71013): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2019-10-06 11:39:57 (71013): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-10-06 11:39:57 (71013): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-10-06 11:39:57 (71013): Guest Log: shared                  221.3G     44.0G    177.3G  20% /root/shared
2019-10-06 11:39:57 (71013): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /var/lib/docker/aufs
2019-10-06 11:39:57 (71013): Guest Log:               total        used        free      shared  buff/cache   available
2019-10-06 11:39:57 (71013): Guest Log: Mem:           3007          51        2254         663         702        2254
2019-10-06 11:39:57 (71013): Guest Log: Swap:           700           0         700
2019-10-06 11:39:57 (71013): Guest Log: Building apps directory...
2019-10-06 11:50:31 (71013): Guest Log: Prerun diagnostics...
2019-10-06 11:50:31 (71013): Guest Log: REPOSITORY                    TAG                 IMAGE ID            CREATED             SIZE
2019-10-06 11:50:31 (71013): Guest Log: nanohub_apps_share64_matlab   4                   32c863520615        22 months ago       488.2 MB
2019-10-06 11:50:31 (71013): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2019-10-06 11:50:31 (71013): Guest Log: 499.0M	/var/lib/docker
2019-10-06 11:50:31 (71013): Guest Log:               total        used        free      shared  buff/cache   available
2019-10-06 11:50:31 (71013): Guest Log: Mem:           3007          38        2255         663         713        2265
2019-10-06 11:50:31 (71013): Guest Log: Swap:           700           0         700
2019-10-06 11:50:31 (71013): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-10-06 11:50:31 (71013): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2019-10-06 11:50:31 (71013): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-10-06 11:50:31 (71013): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-10-06 11:50:31 (71013): Guest Log: shared                  221.3G     50.7G    170.6G  23% /root/shared
2019-10-06 11:50:31 (71013): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /var/lib/docker/aufs
2019-10-06 11:50:31 (71013): Guest Log: Running... 
2019-10-06 11:50:31 (71013): Guest Log: 07513856_038.boinc
2019-10-06 11:50:31 (71013): Guest Log: 07513856_038.sh
2019-10-06 11:53:54 (71013): Guest Log: boinc_app exited (0)
2019-10-06 11:53:54 (71013): Guest Log: Saving results...
2019-10-06 11:53:54 (71013): Guest Log: 07513856_038_output.tar.gz
2019-10-06 11:53:54 (71013): VM Completion File Detected.
2019-10-06 11:53:54 (71013): Powering off VM.
2019-10-06 11:53:56 (71013): Successfully stopped VM.
2019-10-06 11:53:56 (71013): Deregistering VM. (boinc_c7fb1d1de90203f7, slot#32)
2019-10-06 11:53:58 (71013): Removing network bandwidth throttle group from VM.
2019-10-06 11:54:00 (71013): Removing storage controller(s) from VM.
2019-10-06 11:54:01 (71013): Removing VM from VirtualBox.
2019-10-06 11:54:02 (71013): Removing virtual ISO 9660 disk from VirtualBox.
11:54:07 (71013): called boinc_finish(0)

</stderr_txt>
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