Task 5981748
| Name | 07513856_039_0 |
| Workunit | 4879655 |
| Created | 6 Oct 2019, 10:27:28 UTC |
| Sent | 6 Oct 2019, 10:27:37 UTC |
| Report deadline | 11 Oct 2019, 10:27:37 UTC |
| Received | 6 Oct 2019, 10:56:13 UTC |
| Server state | Over |
| Outcome | Computation error |
| Client state | Compute error |
| Exit status | 194 (0x000000C2) EXIT_ABORTED_BY_CLIENT |
| Computer ID | 3706 |
| Run time | 3 min 29 sec |
| CPU time | 1 min 53 sec |
| Validate state | Invalid |
| Credit | 0.00 |
| Device peak FLOPS | 5.03 GFLOPS |
| Application version | boinc2docker v1.12 (vbox64_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.89 GB |
| Peak swap size | 3.64 GB |
| Peak disk usage | 837.05 MB |
Stderr output
<core_client_version>7.9.3</core_client_version>
<![CDATA[
<message>
finish file present too long</message>
<stderr_txt>
2019-10-06 11:38:32 (67675): vboxwrapper (7.7.26197): starting
2019-10-06 11:38:32 (67675): Feature: Checkpoint interval offset (197 seconds)
2019-10-06 11:38:32 (67675): Detected: VirtualBox VboxManage Interface (Version: 5.2.32)
2019-10-06 11:38:32 (67675): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-10-06 11:38:32 (67675): Create VM. (boinc_8e3fb2669ef70b46, slot#30)
2019-10-06 11:38:32 (67675): Updating drive controller type and model for desired configuration.
2019-10-06 11:38:33 (67675): Setting Memory Size for VM. (3072MB)
2019-10-06 11:38:34 (67675): Setting CPU Count for VM. (1)
2019-10-06 11:38:34 (67675): Setting Chipset Options for VM.
2019-10-06 11:38:35 (67675): Setting Boot Options for VM.
2019-10-06 11:38:35 (67675): Setting Network Configuration for NAT.
2019-10-06 11:38:35 (67675): Enabling VM Network Access.
2019-10-06 11:38:36 (67675): Disabling USB Support for VM.
2019-10-06 11:38:36 (67675): Disabling COM Port Support for VM.
2019-10-06 11:38:36 (67675): Disabling LPT Port Support for VM.
2019-10-06 11:38:37 (67675): Disabling Audio Support for VM.
2019-10-06 11:38:37 (67675): Disabling Clipboard Support for VM.
2019-10-06 11:38:37 (67675): Disabling Drag and Drop Support for VM.
2019-10-06 11:38:38 (67675): Adding storage controller(s) to VM.
2019-10-06 11:38:38 (67675): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2019-10-06 11:38:38 (67675): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-10-06 11:38:38 (67675): Enabling shared directory for VM.
2019-10-06 11:38:39 (67675): Starting VM. (boinc_8e3fb2669ef70b46, slot#30)
2019-10-06 11:38:40 (67675): Successfully started VM. (PID = '68625')
2019-10-06 11:38:40 (67675): Reporting VM Process ID to BOINC.
2019-10-06 11:38:40 (67675): Guest Log: BIOS: VirtualBox 5.2.32
2019-10-06 11:38:40 (67675): Guest Log: CPUID EDX: 0x078bfbff
2019-10-06 11:38:40 (67675): VM state change detected. (old = 'poweroff', new = 'running')
2019-10-06 11:38:41 (67675): Preference change detected
2019-10-06 11:38:41 (67675): Setting CPU throttle for VM. (100%)
2019-10-06 11:39:00 (67675): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 600 seconds))
2019-10-06 11:39:00 (67675): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-10-06 11:39:00 (67675): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2019-10-06 11:39:00 (67675): Guest Log: BIOS: Boot from Hard Disk 0 failed
2019-10-06 11:39:00 (67675): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2019-10-06 11:39:00 (67675): Guest Log: BIOS: Booting from CD-ROM...
2019-10-06 11:39:08 (67675): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-10-06 11:39:08 (67675): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000
2019-10-06 11:39:17 (67675): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-10-06 11:39:17 (67675): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-10-06 11:39:17 (67675): Guest Log: net.ipv4.ip_forward = 1
2019-10-06 11:39:17 (67675): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2019-10-06 11:39:17 (67675): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-10-06 11:39:17 (67675): Guest Log: sysctl: "cannot stat %s" is an unknown key
2019-10-06 11:39:17 (67675): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-10-06 11:39:17 (67675): Guest Log: Segmentation fault
2019-10-06 11:39:17 (67675): Guest Log: automount ...
2019-10-06 11:39:17 (67675): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2019-10-06 11:39:17 (67675): Guest Log: automount over.
2019-10-06 11:39:17 (67675): Guest Log: [1;32mSetting hostname to [1;35mboot2docker[0;39m [1;32mDone.[0;39m
2019-10-06 11:39:17 (67675): Guest Log: Sun Oct 6 11:39:14 UTC 2019 dhcp -------------------------------
2019-10-06 11:39:22 (67675): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1064)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00 (1282)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXCPU:00 (1283)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00 (1284)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0 (1285)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0/event0 (1286)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00 (1287)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1 (1288)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1/event1 (1289)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00 (1290)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00 (1291)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00 (1292)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00/power_supply/AC (1293)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00 (1294)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/device:01 (1295)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6 (1296)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6/event5 (1297)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1298)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1299)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1300)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1301)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1302)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1303)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1304)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1305)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1306)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00 (1307)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1312)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1313)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1314)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1315)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1316)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:02 (1317)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1318)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1319)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1320)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1321)
2019-10-06 11:39:22 (67675): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:01 (1322)
2019-10-06 11:39:23 (67675): Guest Log: Sun Oct 6 11:39:20 UTC 2019 dhcp -------------------------------
2019-10-06 11:39:23 (67675): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log
2019-10-06 11:39:23 (67675): Guest Log: 00:00:00.000079 main Log opened 2019-10-06T11:39:20.969176000Z
2019-10-06 11:39:23 (67675): Guest Log: 00:00:00.002036 main OS Product: Linux
2019-10-06 11:39:23 (67675): Guest Log: 00:00:00.002036 main OS Product: Linux
2019-10-06 11:39:23 (67675): Guest Log: 00:00:00.002618 main OS Release: 4.1.19-boot2docker
2019-10-06 11:39:23 (67675): Guest Log: 00:00:00.002618 main OS Release: 4.1.19-boot2docker
2019-10-06 11:39:23 (67675): Guest Log: 00:00:00.003240 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-10-06 11:39:23 (67675): Guest Log: 00:00:00.003268 main Executable: /sbin/VBoxService
2019-10-06 11:39:23 (67675): Guest Log: 00:00:00.003269 main Process ID: 785
2019-10-06 11:39:23 (67675): Guest Log: 00:00:00.003270 main Package type: LINUX_64BITS_GENERIC
2019-10-06 11:39:23 (67675): Guest Log: 00:00:00.003240 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-10-06 11:39:23 (67675): Guest Log: 00:00:00.003268 main Executable: /sbin/VBoxService
2019-10-06 11:39:23 (67675): Guest Log: 00:00:00.003269 main Process ID: 785
2019-10-06 11:39:23 (67675): Guest Log: 00:00:00.000:00:00.005708 main 5.0.16 r105871 started. Verbose level = 0
2019-10-06 11:39:23 (67675): Guest Log: 03270 main Package type: LINUX_64BITS_GENERIC
2019-10-06 11:39:23 (67675): Guest Log: 00:00:00.005708 main 5.0.16 r105871 started. Verbose level = 0
2019-10-06 11:39:23 (67675): Guest Log: 00:00:00.010157 vminfo rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2019-10-06 11:39:23 (67675): Guest Log: 00:00:00.010212 vminfo Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2019-10-06 11:39:23 (67675): Guest Log: Mounting BOINC shared/...
2019-10-06 11:39:23 (67675): Guest Log: -------------------
2019-10-06 11:39:23 (67675): Guest Log: Sun Oct 6 10:39:23 UTC 2019
2019-10-06 11:39:28 (67675): Guest Log: 00:00:05.010934 vminfo Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2019-10-06 11:39:28 (67675): Guest Log: Sun Oct 6 10:39:28 UTC 2019
2019-10-06 11:39:28 (67675): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default
2019-10-06 11:39:28 (67675): Guest Log: link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2019-10-06 11:39:28 (67675): Guest Log: inet 127.0.0.1/8 scope host lo
2019-10-06 11:39:28 (67675): Guest Log: valid_lft forever preferred_lft forever
2019-10-06 11:39:28 (67675): Guest Log: inet6 ::1/128 scope host
2019-10-06 11:39:28 (67675): Guest Log: valid_lft forever preferred_lft forever
2019-10-06 11:39:28 (67675): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default
2019-10-06 11:39:28 (67675): Guest Log: link/ether fa:f1:57:52:ba:e8 brd ff:ff:ff:ff:ff:ff
2019-10-06 11:39:28 (67675): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2019-10-06 11:39:28 (67675): Guest Log: link/ether 08:00:27:3c:10:02 brd ff:ff:ff:ff:ff:ff
2019-10-06 11:39:28 (67675): Guest Log: inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2019-10-06 11:39:28 (67675): Guest Log: valid_lft forever preferred_lft forever
2019-10-06 11:39:28 (67675): Guest Log: inet6 fe80::a00:27ff:fe3c:1002/64 scope link
2019-10-06 11:39:28 (67675): Guest Log: valid_lft forever preferred_lft forever
2019-10-06 11:39:28 (67675): Guest Log: -------------------
2019-10-06 11:39:28 (67675): Guest Log: Waiting for Docker daemon to start...
2019-10-06 11:39:30 (67675): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE
2019-10-06 11:39:30 (67675): Guest Log: Running boinc_app...
2019-10-06 11:39:30 (67675): Guest Log: Importing Docker image from BOINC...
2019-10-06 11:39:30 (67675): Guest Log: Filesystem Size Used Available Use% Mounted on
2019-10-06 11:39:30 (67675): Guest Log: tmpfs 2.6G 164.2M 2.5G 6% /
2019-10-06 11:39:30 (67675): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2019-10-06 11:39:30 (67675): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2019-10-06 11:39:30 (67675): Guest Log: shared 221.3G 42.9G 178.4G 19% /root/shared
2019-10-06 11:39:30 (67675): Guest Log: tmpfs 2.6G 164.2M 2.5G 6% /var/lib/docker/aufs
2019-10-06 11:39:33 (67675): Guest Log: 00:00:10.011809 vminfo Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2019-10-06 11:39:37 (67675): Guest Log: doing docker load...
2019-10-06 11:39:49 (67675): Guest Log: Filesystem Size Used Available Use% Mounted on
2019-10-06 11:39:49 (67675): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /
2019-10-06 11:39:49 (67675): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2019-10-06 11:39:49 (67675): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2019-10-06 11:39:49 (67675): Guest Log: shared 221.3G 43.7G 177.6G 20% /root/shared
2019-10-06 11:39:49 (67675): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /var/lib/docker/aufs
2019-10-06 11:39:49 (67675): Guest Log: total used free shared buff/cache available
2019-10-06 11:39:49 (67675): Guest Log: Mem: 3007 49 2256 663 702 2256
2019-10-06 11:39:49 (67675): Guest Log: Swap: 702 0 702
2019-10-06 11:39:49 (67675): Guest Log: Building apps directory...
2019-10-06 11:50:21 (67675): Guest Log: Prerun diagnostics...
2019-10-06 11:50:21 (67675): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE
2019-10-06 11:50:21 (67675): Guest Log: nanohub_apps_share64_matlab 4 32c863520615 22 months ago 488.2 MB
2019-10-06 11:50:21 (67675): Guest Log: CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
2019-10-06 11:50:21 (67675): Guest Log: 499.0M /var/lib/docker
2019-10-06 11:50:21 (67675): Guest Log: total used free shared buff/cache available
2019-10-06 11:50:21 (67675): Guest Log: Mem: 3007 37 2256 663 713 2266
2019-10-06 11:50:21 (67675): Guest Log: Swap: 702 0 702
2019-10-06 11:50:21 (67675): Guest Log: Filesystem Size Used Available Use% Mounted on
2019-10-06 11:50:21 (67675): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /
2019-10-06 11:50:21 (67675): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2019-10-06 11:50:21 (67675): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2019-10-06 11:50:21 (67675): Guest Log: shared 221.3G 50.8G 170.5G 23% /root/shared
2019-10-06 11:50:21 (67675): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /var/lib/docker/aufs
2019-10-06 11:50:21 (67675): Guest Log: Running...
2019-10-06 11:50:21 (67675): Guest Log: 07513856_039.boinc
2019-10-06 11:50:21 (67675): Guest Log: 07513856_039.sh
2019-10-06 11:53:54 (67675): Guest Log: boinc_app exited (0)
2019-10-06 11:53:54 (67675): Guest Log: Saving results...
2019-10-06 11:53:54 (67675): Guest Log: 07513856_039_output.tar.gz
2019-10-06 11:53:54 (67675): VM Completion File Detected.
2019-10-06 11:53:54 (67675): Powering off VM.
2019-10-06 11:53:56 (67675): Status Report: virtualbox/vboxheadless is no longer running.
2019-10-06 11:53:56 (67675): Successfully stopped VM.
2019-10-06 11:53:56 (67675): Deregistering VM. (boinc_8e3fb2669ef70b46, slot#30)
2019-10-06 11:53:58 (67675): Removing network bandwidth throttle group from VM.
2019-10-06 11:54:00 (67675): Removing storage controller(s) from VM.
2019-10-06 11:54:01 (67675): Removing VM from VirtualBox.
2019-10-06 11:54:01 (67675): Removing virtual ISO 9660 disk from VirtualBox.
11:54:06 (67675): called boinc_finish(0)
</stderr_txt>
]]>
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