Task 5983608

Name 07513874_008_0
Workunit 4881470
Created 6 Oct 2019, 10:36:38 UTC
Sent 6 Oct 2019, 10:37:00 UTC
Report deadline 11 Oct 2019, 10:37:00 UTC
Received 6 Oct 2019, 11:25:05 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 3690
Run time 3 min 13 sec
CPU time 2 min 12 sec
Validate state Valid
Credit 2.50
Device peak FLOPS 4.79 GFLOPS
Application version boinc2docker v1.12 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 3.45 GB
Peak swap size 4.97 GB
Peak disk usage 290.22 MB

Stderr output

<core_client_version>7.12.0</core_client_version>
<![CDATA[
<stderr_txt>
2019-10-06 12:16:00 (92266): vboxwrapper (7.7.26197): starting
2019-10-06 12:16:00 (92266): Feature: Checkpoint interval offset (443 seconds)
2019-10-06 12:16:00 (92266): Detected: VirtualBox VboxManage Interface (Version: 5.2.18)
2019-10-06 12:16:01 (92266): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-10-06 12:16:02 (92266): Create VM. (boinc_43b6062653ba9023, slot#67)
2019-10-06 12:16:02 (92266): Updating drive controller type and model for desired configuration.
2019-10-06 12:16:06 (92266): Setting Memory Size for VM. (3072MB)
2019-10-06 12:16:15 (92266): Setting CPU Count for VM. (1)
2019-10-06 12:16:16 (92266): Setting Chipset Options for VM.
2019-10-06 12:16:16 (92266): Setting Boot Options for VM.
2019-10-06 12:16:16 (92266): Setting Network Configuration for NAT.
2019-10-06 12:16:17 (92266): Enabling VM Network Access.
2019-10-06 12:16:17 (92266): Disabling USB Support for VM.
2019-10-06 12:16:18 (92266): Disabling COM Port Support for VM.
2019-10-06 12:16:18 (92266): Disabling LPT Port Support for VM.
2019-10-06 12:16:18 (92266): Disabling Audio Support for VM.
2019-10-06 12:16:19 (92266): Disabling Clipboard Support for VM.
2019-10-06 12:16:19 (92266): Disabling Drag and Drop Support for VM.
2019-10-06 12:16:20 (92266): Adding storage controller(s) to VM.
2019-10-06 12:16:24 (92266): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2019-10-06 12:16:24 (92266): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-10-06 12:16:24 (92266): Enabling shared directory for VM.
2019-10-06 12:16:33 (92266): Starting VM. (boinc_43b6062653ba9023, slot#67)
2019-10-06 12:16:37 (92266): Successfully started VM. (PID = '99318')
2019-10-06 12:16:37 (92266): Reporting VM Process ID to BOINC.
2019-10-06 12:16:39 (92266): Guest Log: BIOS: VirtualBox 5.2.18
2019-10-06 12:16:39 (92266): Guest Log: CPUID EDX: 0x078bfbff
2019-10-06 12:16:39 (92266): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-10-06 12:16:39 (92266): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2019-10-06 12:16:39 (92266): Guest Log: BIOS: Boot from Hard Disk 0 failed
2019-10-06 12:16:39 (92266): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2019-10-06 12:16:39 (92266): Guest Log: BIOS: Booting from CD-ROM...
2019-10-06 12:16:41 (92266): VM state change detected. (old = 'poweroff', new = 'running')
2019-10-06 12:16:41 (92266): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-10-06 12:16:41 (92266): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2019-10-06 12:16:43 (92266): Preference change detected
2019-10-06 12:16:43 (92266): Setting CPU throttle for VM. (100%)
2019-10-06 12:16:45 (92266): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 600 seconds))
2019-10-06 12:16:56 (92266): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-10-06 12:16:56 (92266): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-10-06 12:16:58 (92266): Guest Log: net.ipv4.ip_forward = 1
2019-10-06 12:16:58 (92266): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2019-10-06 12:16:58 (92266): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-10-06 12:16:58 (92266): Guest Log: sysctl: "cannot stat %s" is an unknown key
2019-10-06 12:16:58 (92266): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-10-06 12:16:58 (92266): Guest Log: Segmentation fault
2019-10-06 12:16:58 (92266): Guest Log: automount ...
2019-10-06 12:16:58 (92266): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2019-10-06 12:16:58 (92266): Guest Log: automount over.
2019-10-06 12:16:58 (92266): Guest Log: Setting hostname to boot2docker Done.
2019-10-06 12:16:58 (92266): Guest Log: Sun Oct  6 12:16:55 UTC 2019 dhcp -------------------------------
2019-10-06 12:17:03 (92266): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2019-10-06 12:17:03 (92266): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1314)
2019-10-06 12:17:03 (92266): Guest Log: Sun Oct  6 12:17:01 UTC 2019 dhcp -------------------------------
2019-10-06 12:17:03 (92266): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-10-06 12:17:03 (92266): Guest Log: 00:00:00.000405 main     Log opened 2019-10-06T12:17:01.766524000Z
2019-10-06 12:17:03 (92266): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-10-06 12:17:03 (92266): Guest Log: 00:00:00.000405 main     Log opened 2019-10-06T12:17:01.766524000Z
2019-10-06 12:17:03 (92266): Guest Log: 00:00:00.005038 main     OS Product: Linux
2019-10-06 12:17:03 (92266): Guest Log: 00:00:00.005038 main     OS Product: Linux
2019-10-06 12:17:03 (92266): Guest Log: 00:00:00.006615 main     OS Release: 4.1.19-boot2docker
2019-10-06 12:17:03 (92266): Guest Log: 00:00:00.006615 main     OS Release: 4.1.19-boot2docker
2019-10-06 12:17:03 (92266): Guest Log: 00:00:00.008285 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-10-06 12:17:03 (92266): Guest Log: 00:00:00.008285 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-10-06 12:17:05 (92266): Guest Log: 00:00:00.013406 main     Executable: /sbin/VBoxService
2019-10-06 12:17:05 (92266): Guest Log: 00:00:00.013426 main     Process ID: 753
2019-10-06 12:17:05 (92266): Guest Log: 00:00:00.013428 main     Package type: LINUX_64BITS_GENERIC
2019-10-06 12:17:05 (92266): Guest Log: 00:00:00.013406 main     Executable: /sbin/VBoxService
2019-10-06 12:17:05 (92266): Guest Log: 00:00:00.013426 main     Process ID: 753
2019-10-06 12:17:05 (92266): Guest Log: 00:00:00.013428 main     Package type: LINUX_64BITS_GENERIC
2019-10-06 12:17:05 (92266): Guest Log: 00:00:00.021919 main     5.0.16 r105871 started. Verbose level = 0
2019-10-06 12:17:05 (92266): Guest Log: 00:00:00.021919 main     5.0.16 r105871 started. Verbose level = 0
2019-10-06 12:17:05 (92266): Guest Log: 00:00:00.048225 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2019-10-06 12:17:05 (92266): Guest Log: 00:00:00.048645 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2019-10-06 12:17:05 (92266): Guest Log: Mounting BOINC shared/...
2019-10-06 12:17:05 (92266): Guest Log: -------------------
2019-10-06 12:17:05 (92266): Guest Log: Sun Oct  6 11:17:03 UTC 2019
2019-10-06 12:17:16 (92266): Guest Log: 00:00:05.054443 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2019-10-06 12:17:16 (92266): Guest Log: Sun Oct  6 11:17:08 UTC 2019
2019-10-06 12:17:16 (92266): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2019-10-06 12:17:16 (92266): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2019-10-06 12:17:16 (92266): Guest Log:     inet 127.0.0.1/8 scope host lo
2019-10-06 12:17:16 (92266): Guest Log:        valid_lft forever preferred_lft forever
2019-10-06 12:17:16 (92266): Guest Log:     inet6 ::1/128 scope host 
2019-10-06 12:17:16 (92266): Guest Log:        valid_lft forever preferred_lft forever
2019-10-06 12:17:16 (92266): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2019-10-06 12:17:16 (92266): Guest Log:     link/ether aa:96:87:b0:ad:37 brd ff:ff:ff:ff:ff:ff
2019-10-06 12:17:16 (92266): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2019-10-06 12:17:16 (92266): Guest Log:     link/ether 08:00:27:db:75:55 brd ff:ff:ff:ff:ff:ff
2019-10-06 12:17:16 (92266): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2019-10-06 12:17:16 (92266): Guest Log:        valid_lft forever preferred_lft forever
2019-10-06 12:17:16 (92266): Guest Log:     inet6 fe80::a00:27ff:fedb:7555/64 scope link 
2019-10-06 12:17:16 (92266): Guest Log:        valid_lft forever preferred_lft forever
2019-10-06 12:17:16 (92266): Guest Log: -------------------
2019-10-06 12:17:16 (92266): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2019-10-06 12:17:16 (92266): Guest Log: Waiting for Docker daemon to start...
2019-10-06 12:17:16 (92266): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2019-10-06 12:17:16 (92266): Guest Log: Running boinc_app...
2019-10-06 12:17:16 (92266): Guest Log: Importing Docker image from BOINC...
2019-10-06 12:17:16 (92266): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-10-06 12:17:16 (92266): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /
2019-10-06 12:17:16 (92266): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-10-06 12:17:16 (92266): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-10-06 12:17:16 (92266): Guest Log: shared                  109.0G     55.6G     53.5G  51% /root/shared
2019-10-06 12:17:16 (92266): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /var/lib/docker/aufs
2019-10-06 12:17:16 (92266): Guest Log: 00:00:10.056466 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2019-10-06 12:17:30 (92266): Guest Log: doing docker load...
2019-10-06 12:18:34 (92266): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-10-06 12:18:34 (92266): Guest Log: tmpfs                     2.6G    803.4M      1.9G  30% /
2019-10-06 12:18:34 (92266): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-10-06 12:18:34 (92266): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-10-06 12:18:34 (92266): Guest Log: shared                  109.0G     55.0G     54.0G  50% /root/shared
2019-10-06 12:18:34 (92266): Guest Log: tmpfs                     2.6G    803.4M      1.9G  30% /var/lib/docker/aufs
2019-10-06 12:18:34 (92266): Guest Log:               total        used        free      shared  buff/cache   available
2019-10-06 12:18:34 (92266): Guest Log: Mem:           3007          54        2104         803         849        2107
2019-10-06 12:18:34 (92266): Guest Log: Swap:           702           0         702
2019-10-06 12:18:34 (92266): Guest Log: Building apps directory...
2019-10-06 12:18:55 (92266): Guest Log: Prerun diagnostics...
2019-10-06 12:18:55 (92266): Guest Log: REPOSITORY           TAG                 IMAGE ID            CREATED             SIZE
2019-10-06 12:18:57 (92266): Guest Log: nanohub_apps_scipy   4                   1c97f9c9808f        22 months ago       627.2 MB
2019-10-06 12:18:57 (92266): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2019-10-06 12:18:57 (92266): Guest Log: 639.3M	/var/lib/docker
2019-10-06 12:18:57 (92266): Guest Log:               total        used        free      shared  buff/cache   available
2019-10-06 12:18:57 (92266): Guest Log: Mem:           3007          54        2102         803         850        2106
2019-10-06 12:18:57 (92266): Guest Log: Swap:           702           0         702
2019-10-06 12:18:57 (92266): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-10-06 12:18:57 (92266): Guest Log: tmpfs                     2.6G    803.4M      1.9G  30% /
2019-10-06 12:18:57 (92266): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-10-06 12:18:57 (92266): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-10-06 12:18:57 (92266): Guest Log: shared                  109.0G     55.3G     53.8G  51% /root/shared
2019-10-06 12:18:57 (92266): Guest Log: tmpfs                     2.6G    803.4M      1.9G  30% /var/lib/docker/aufs
2019-10-06 12:18:57 (92266): Guest Log: Running... 
2019-10-06 12:18:57 (92266): Guest Log: 07513874_008.boinc
2019-10-06 12:18:57 (92266): Guest Log: 07513874_008.sh
2019-10-06 12:19:30 (92266): Guest Log: boinc_app exited (0)
2019-10-06 12:19:30 (92266): Guest Log: Saving results...
2019-10-06 12:19:30 (92266): Guest Log: 07513874_008_output.tar.gz
2019-10-06 12:19:30 (92266): VM Completion File Detected.
2019-10-06 12:19:30 (92266): Powering off VM.
2019-10-06 12:19:34 (92266): Successfully stopped VM.
2019-10-06 12:19:34 (92266): Deregistering VM. (boinc_43b6062653ba9023, slot#67)
2019-10-06 12:19:34 (92266): Removing network bandwidth throttle group from VM.
2019-10-06 12:19:34 (92266): Removing storage controller(s) from VM.
2019-10-06 12:19:35 (92266): Removing VM from VirtualBox.
2019-10-06 12:19:35 (92266): Removing virtual ISO 9660 disk from VirtualBox.
12:19:40 (92266): called boinc_finish(0)

</stderr_txt>
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