Task 5983638

Name 07513874_038_0
Workunit 4881500
Created 6 Oct 2019, 10:36:38 UTC
Sent 6 Oct 2019, 10:37:00 UTC
Report deadline 11 Oct 2019, 10:37:00 UTC
Received 6 Oct 2019, 11:25:05 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 3690
Run time 3 min 46 sec
CPU time 2 min 53 sec
Validate state Valid
Credit 2.92
Device peak FLOPS 4.79 GFLOPS
Application version boinc2docker v1.12 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 3.26 GB
Peak swap size 4.72 GB
Peak disk usage 290.15 MB

Stderr output

<core_client_version>7.12.0</core_client_version>
<![CDATA[
<stderr_txt>
2019-10-06 12:16:52 (102787): vboxwrapper (7.7.26197): starting
2019-10-06 12:16:53 (102787): Feature: Checkpoint interval offset (154 seconds)
2019-10-06 12:16:53 (102787): Detected: VirtualBox VboxManage Interface (Version: 5.2.18)
2019-10-06 12:16:54 (102787): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-10-06 12:16:55 (102787): Create VM. (boinc_58f84e9f1ee1778e, slot#15)
2019-10-06 12:16:55 (102787): Updating drive controller type and model for desired configuration.
2019-10-06 12:16:57 (102787): Setting Memory Size for VM. (3072MB)
2019-10-06 12:16:57 (102787): Setting CPU Count for VM. (1)
2019-10-06 12:16:58 (102787): Setting Chipset Options for VM.
2019-10-06 12:16:58 (102787): Setting Boot Options for VM.
2019-10-06 12:16:58 (102787): Setting Network Configuration for NAT.
2019-10-06 12:17:00 (102787): Enabling VM Network Access.
2019-10-06 12:17:02 (102787): Disabling USB Support for VM.
2019-10-06 12:17:04 (102787): Disabling COM Port Support for VM.
2019-10-06 12:17:14 (102787): Disabling LPT Port Support for VM.
2019-10-06 12:17:15 (102787): Disabling Audio Support for VM.
2019-10-06 12:17:16 (102787): Disabling Clipboard Support for VM.
2019-10-06 12:17:16 (102787): Disabling Drag and Drop Support for VM.
2019-10-06 12:17:16 (102787): Adding storage controller(s) to VM.
2019-10-06 12:17:17 (102787): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2019-10-06 12:17:18 (102787): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-10-06 12:17:19 (102787): Enabling shared directory for VM.
2019-10-06 12:17:21 (102787): Starting VM. (boinc_58f84e9f1ee1778e, slot#15)
2019-10-06 12:17:30 (102787): Successfully started VM. (PID = '108877')
2019-10-06 12:17:30 (102787): Reporting VM Process ID to BOINC.
2019-10-06 12:17:32 (102787): Guest Log: BIOS: VirtualBox 5.2.18
2019-10-06 12:17:32 (102787): Guest Log: CPUID EDX: 0x078bfbff
2019-10-06 12:17:32 (102787): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-10-06 12:17:32 (102787): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2019-10-06 12:17:32 (102787): Guest Log: BIOS: Boot from Hard Disk 0 failed
2019-10-06 12:17:32 (102787): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2019-10-06 12:17:33 (102787): VM state change detected. (old = 'poweroff', new = 'running')
2019-10-06 12:17:34 (102787): Preference change detected
2019-10-06 12:17:34 (102787): Setting CPU throttle for VM. (100%)
2019-10-06 12:17:38 (102787): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 600 seconds))
2019-10-06 12:17:38 (102787): Guest Log: BIOS: Booting from CD-ROM...
2019-10-06 12:17:41 (102787): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-10-06 12:17:41 (102787): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2019-10-06 12:17:57 (102787): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-10-06 12:17:57 (102787): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-10-06 12:17:58 (102787): Guest Log: net.ipv4.ip_forward = 1
2019-10-06 12:17:58 (102787): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2019-10-06 12:17:58 (102787): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-10-06 12:17:58 (102787): Guest Log: sysctl: "cannot stat %s" is an unknown key
2019-10-06 12:17:58 (102787): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-10-06 12:17:58 (102787): Guest Log: Segmentation fault
2019-10-06 12:17:58 (102787): Guest Log: automount ...
2019-10-06 12:18:01 (102787): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2019-10-06 12:18:01 (102787): Guest Log: automount over.
2019-10-06 12:18:01 (102787): Guest Log: Setting hostname to boot2docker Done.
2019-10-06 12:18:01 (102787): Guest Log: Sun Oct  6 12:17:58 UTC 2019 dhcp -------------------------------
2019-10-06 12:18:05 (102787): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2019-10-06 12:18:05 (102787): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1316)
2019-10-06 12:18:07 (102787): Guest Log: Sun Oct  6 12:18:04 UTC 2019 dhcp -------------------------------
2019-10-06 12:18:09 (102787): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-10-06 12:18:09 (102787): Guest Log: 00:00:00.001073 main     Log opened 2019-10-06T12:18:05.469316000Z
2019-10-06 12:18:09 (102787): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-10-06 12:18:09 (102787): Guest Log: 00:00:00.001073 main     Log opened 2019-10-06T12:18:05.469316000Z
2019-10-06 12:18:09 (102787): Guest Log: 00:00:00.008002 main     OS Product: Linux
2019-10-06 12:18:09 (102787): Guest Log: 00:00:00.008561 main     OS Release: 4.1.19-boot2docker
2019-10-06 12:18:09 (102787): Guest Log: 00:00:00.008850 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-10-06 12:18:09 (102787): Guest Log: 00:00:00.009138 main     Executable: /sbin/VBoxService
2019-10-06 12:18:09 (102787): Guest Log: 00:00:00.009148 main     Process ID: 742
2019-10-06 12:18:09 (102787): Guest Log: 00:00:00.009153 main     Package type: LINUX_64BITS_GENERIC
2019-10-06 12:18:09 (102787): Guest Log: 00:00:00.008002 main     OS Product: Linux
2019-10-06 12:18:09 (102787): Guest Log: 00:00:00.008561 main     OS Release: 4.1.19-boot2docker
2019-10-06 12:18:09 (102787): Guest Log: 00:00:00.00800:00:00.021054 main     5.0.16 r105871 started. Verbose level = 0
2019-10-06 12:18:09 (102787): Guest Log: 850 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-10-06 12:18:09 (102787): Guest Log: 00:00:00.009138 main     Executable: /sbin/VBoxService
2019-10-06 12:18:09 (102787): Guest Log: 00:00:00.009148 main     Process ID: 742
2019-10-06 12:18:09 (102787): Guest Log: 00:00:0000:00:00.077721 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2019-10-06 12:18:09 (102787): Guest Log: 00:00:00.078213 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2019-10-06 12:18:09 (102787): Guest Log: .009153 main     Package type: LINUX_64BITS_GENERIC
2019-10-06 12:18:09 (102787): Guest Log: 00:00:00.021054 main     5.0.16 r105871 started. Verbose level = 0
2019-10-06 12:18:09 (102787): Guest Log: Mounting BOINC shared/...
2019-10-06 12:18:09 (102787): Guest Log: -------------------
2019-10-06 12:18:09 (102787): Guest Log: Sun Oct  6 11:18:07 UTC 2019
2019-10-06 12:18:14 (102787): Guest Log: 00:00:05.083034 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2019-10-06 12:18:14 (102787): Guest Log: Sun Oct  6 11:18:12 UTC 2019
2019-10-06 12:18:14 (102787): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2019-10-06 12:18:14 (102787): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2019-10-06 12:18:14 (102787): Guest Log:     inet 127.0.0.1/8 scope host lo
2019-10-06 12:18:14 (102787): Guest Log:        valid_lft forever preferred_lft forever
2019-10-06 12:18:14 (102787): Guest Log:     inet6 ::1/128 scope host 
2019-10-06 12:18:14 (102787): Guest Log:        valid_lft forever preferred_lft forever
2019-10-06 12:18:14 (102787): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2019-10-06 12:18:14 (102787): Guest Log:     link/ether 26:8d:c7:c4:6f:a2 brd ff:ff:ff:ff:ff:ff
2019-10-06 12:18:14 (102787): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2019-10-06 12:18:14 (102787): Guest Log:     link/ether 08:00:27:da:f1:88 brd ff:ff:ff:ff:ff:ff
2019-10-06 12:18:14 (102787): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2019-10-06 12:18:14 (102787): Guest Log:        valid_lft forever preferred_lft forever
2019-10-06 12:18:14 (102787): Guest Log:     inet6 fe80::a00:27ff:feda:f188/64 scope link 
2019-10-06 12:18:14 (102787): Guest Log:        valid_lft forever preferred_lft forever
2019-10-06 12:18:14 (102787): Guest Log: -------------------
2019-10-06 12:18:14 (102787): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2019-10-06 12:18:14 (102787): Guest Log: Waiting for Docker daemon to start...
2019-10-06 12:18:15 (102787): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2019-10-06 12:18:15 (102787): Guest Log: Running boinc_app...
2019-10-06 12:18:15 (102787): Guest Log: Importing Docker image from BOINC...
2019-10-06 12:18:15 (102787): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-10-06 12:18:15 (102787): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /
2019-10-06 12:18:15 (102787): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-10-06 12:18:15 (102787): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-10-06 12:18:15 (102787): Guest Log: shared                  109.0G     54.8G     54.2G  50% /root/shared
2019-10-06 12:18:15 (102787): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /var/lib/docker/aufs
2019-10-06 12:18:18 (102787): Guest Log: 00:00:10.155561 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2019-10-06 12:18:49 (102787): Guest Log: doing docker load...
2019-10-06 12:20:06 (102787): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-10-06 12:20:06 (102787): Guest Log: tmpfs                     2.6G    803.4M      1.9G  30% /
2019-10-06 12:20:06 (102787): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-10-06 12:20:06 (102787): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-10-06 12:20:06 (102787): Guest Log: shared                  109.0G     55.0G     54.1G  50% /root/shared
2019-10-06 12:20:06 (102787): Guest Log: tmpfs                     2.6G    803.4M      1.9G  30% /var/lib/docker/aufs
2019-10-06 12:20:06 (102787): Guest Log:               total        used        free      shared  buff/cache   available
2019-10-06 12:20:06 (102787): Guest Log: Mem:           3007          55        2103         803         849        2106
2019-10-06 12:20:06 (102787): Guest Log: Swap:           704           0         704
2019-10-06 12:20:06 (102787): Guest Log: Building apps directory...
2019-10-06 12:20:53 (102787): Guest Log: Prerun diagnostics...
2019-10-06 12:20:53 (102787): Guest Log: REPOSITORY           TAG                 IMAGE ID            CREATED             SIZE
2019-10-06 12:20:53 (102787): Guest Log: nanohub_apps_scipy   4                   1c97f9c9808f        22 months ago       627.2 MB
2019-10-06 12:20:53 (102787): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2019-10-06 12:20:53 (102787): Guest Log: 639.3M	/var/lib/docker
2019-10-06 12:20:53 (102787): Guest Log:               total        used        free      shared  buff/cache   available
2019-10-06 12:20:53 (102787): Guest Log: Mem:           3007          55        2101         803         850        2105
2019-10-06 12:20:53 (102787): Guest Log: Swap:           704           0         704
2019-10-06 12:20:53 (102787): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-10-06 12:20:53 (102787): Guest Log: tmpfs                     2.6G    803.4M      1.9G  30% /
2019-10-06 12:20:53 (102787): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-10-06 12:20:53 (102787): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-10-06 12:20:53 (102787): Guest Log: shared                  109.0G     53.5G     55.5G  49% /root/shared
2019-10-06 12:20:53 (102787): Guest Log: tmpfs                     2.6G    803.4M      1.9G  30% /var/lib/docker/aufs
2019-10-06 12:20:53 (102787): Guest Log: Running... 
2019-10-06 12:20:55 (102787): Guest Log: 07513874_038.boinc
2019-10-06 12:20:55 (102787): Guest Log: 07513874_038.sh
2019-10-06 12:22:02 (102787): Guest Log: boinc_app exited (0)
2019-10-06 12:22:02 (102787): Guest Log: Saving results...
2019-10-06 12:22:02 (102787): Guest Log: 07513874_038_output.tar.gz
2019-10-06 12:22:02 (102787): VM Completion File Detected.
2019-10-06 12:22:02 (102787): Powering off VM.
2019-10-06 12:22:12 (102787): Successfully stopped VM.
2019-10-06 12:22:12 (102787): Deregistering VM. (boinc_58f84e9f1ee1778e, slot#15)
2019-10-06 12:22:12 (102787): Removing network bandwidth throttle group from VM.
2019-10-06 12:22:12 (102787): Removing storage controller(s) from VM.
2019-10-06 12:22:14 (102787): Removing VM from VirtualBox.
2019-10-06 12:22:14 (102787): Removing virtual ISO 9660 disk from VirtualBox.
12:22:19 (102787): called boinc_finish(0)

</stderr_txt>
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