Task 6146158

Name 07517847_070_1
Workunit 4986008
Created 9 Oct 2019, 12:23:53 UTC
Sent 9 Oct 2019, 12:28:07 UTC
Report deadline 14 Oct 2019, 12:28:07 UTC
Received 9 Oct 2019, 21:36:15 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 215
Run time 2 min 39 sec
CPU time 1 min 26 sec
Validate state Valid
Credit 1.09
Device peak FLOPS 2.24 GFLOPS
Application version boinc2docker v1.12 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 93.68 MB
Peak swap size 3.77 GB
Peak disk usage 290.82 MB

Stderr output

<core_client_version>7.4.23</core_client_version>
<![CDATA[
<stderr_txt>
2019-10-09 16:49:55 (28168): vboxwrapper (7.7.26197): starting
2019-10-09 16:49:55 (28168): Feature: Checkpoint interval offset (190 seconds)
2019-10-09 16:49:55 (28168): Detected: VirtualBox VboxManage Interface (Version: 5.1.8)
2019-10-09 16:49:55 (28168): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-10-09 16:49:55 (28168): Create VM. (boinc_3d19e5d6983f2d66, slot#0)
2019-10-09 16:49:55 (28168): Updating drive controller type and model for desired configuration.
2019-10-09 16:50:04 (28168): Setting Memory Size for VM. (3072MB)
2019-10-09 16:50:04 (28168): Setting CPU Count for VM. (1)
2019-10-09 16:50:05 (28168): Setting Chipset Options for VM.
2019-10-09 16:50:05 (28168): Setting Boot Options for VM.
2019-10-09 16:50:05 (28168): Setting Network Configuration for NAT.
2019-10-09 16:50:05 (28168): Enabling VM Network Access.
2019-10-09 16:50:05 (28168): Disabling USB Support for VM.
2019-10-09 16:50:05 (28168): Disabling COM Port Support for VM.
2019-10-09 16:50:06 (28168): Disabling LPT Port Support for VM.
2019-10-09 16:50:06 (28168): Disabling Audio Support for VM.
2019-10-09 16:50:06 (28168): Disabling Clipboard Support for VM.
2019-10-09 16:50:06 (28168): Disabling Drag and Drop Support for VM.
2019-10-09 16:50:06 (28168): Adding storage controller(s) to VM.
2019-10-09 16:50:06 (28168): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2019-10-09 16:50:06 (28168): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-10-09 16:50:06 (28168): Enabling shared directory for VM.
2019-10-09 16:50:07 (28168): Starting VM. (boinc_3d19e5d6983f2d66, slot#0)
2019-10-09 16:50:08 (28168): Successfully started VM. (PID = '29143')
2019-10-09 16:50:08 (28168): Reporting VM Process ID to BOINC.
2019-10-09 16:50:08 (28168): Guest Log: BIOS: VirtualBox 5.1.8
2019-10-09 16:50:08 (28168): VM state change detected. (old = 'poweroff', new = 'running')
2019-10-09 16:50:09 (28168): Preference change detected
2019-10-09 16:50:09 (28168): Setting CPU throttle for VM. (75%)
2019-10-09 16:50:09 (28168): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2019-10-09 16:50:11 (28168): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-10-09 16:50:11 (28168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2019-10-09 16:50:11 (28168): Guest Log: BIOS: Boot from Hard Disk 0 failed
2019-10-09 16:50:11 (28168): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2019-10-09 16:50:11 (28168): Guest Log: BIOS: Booting from CD-ROM...
2019-10-09 16:50:12 (28168): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-10-09 16:50:12 (28168): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2019-10-09 16:50:28 (28168): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-10-09 16:50:28 (28168): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-10-09 16:50:34 (28168): Guest Log: net.ipv4.ip_forward = 1
2019-10-09 16:50:34 (28168): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2019-10-09 16:50:34 (28168): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-10-09 16:50:34 (28168): Guest Log: sysctl: "cannot stat %s" is an unknown key
2019-10-09 16:50:34 (28168): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-10-09 16:50:34 (28168): Guest Log: Segmentation fault
2019-10-09 16:50:34 (28168): Guest Log: automount ...
2019-10-09 16:50:41 (28168): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2019-10-09 16:50:46 (28168): Guest Log: automount over.
2019-10-09 16:50:46 (28168): Guest Log: Setting hostname to boot2docker Done.
2019-10-09 16:50:46 (28168): Guest Log: Wed Oct  9 16:50:44 UTC 2019 dhcp -------------------------------
2019-10-09 16:50:51 (28168): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2019-10-09 16:50:51 (28168): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata1/host0/target0:0:0/0:0:0:0/block/sr0 (1342)
2019-10-09 16:50:51 (28168): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata1/host0/target0:0:0/0:0:0:0/block/sr0 (1536)
2019-10-09 16:50:51 (28168): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata1/host0/target0:0:0/0:0:0:0/block/sr0 (1545)
2019-10-09 16:50:53 (28168): Guest Log: Wed Oct  9 16:50:50 UTC 2019 dhcp -------------------------------
2019-10-09 16:50:53 (28168): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-10-09 16:50:53 (28168): Guest Log: 00:00:00.000816 main     Log opened 2019-10-09T16:50:51.213422000Z
2019-10-09 16:50:53 (28168): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-10-09 16:50:53 (28168): Guest Log: 00:00:00.005321 main     OS Product: Linux
2019-10-09 16:50:53 (28168): Guest Log: 00:00:00.005402 main     OS Release: 4.1.19-boot2docker
2019-10-09 16:50:53 (28168): Guest Log: 00:00:00.005472 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-10-09 16:50:53 (28168): Guest Log: 00:00:00.005530 main     Executable: /sbin/VBoxService
2019-10-09 16:50:53 (28168): Guest Log: 00:00:00.005532 main     Process ID: 729
2019-10-09 16:50:53 (28168): Guest Log: 00:00:00.005533 main     Package type: LINUX_64BITS_GENERIC
2019-10-09 16:50:53 (28168): Guest Log: 00:00:00.000816 main     Log opened 2019-10-09T16:50:51.213422000Z
2019-10-09 16:50:53 (28168): Guest Log: 00:00:00.005321 main     OS Product: Linux
2019-10-09 16:50:53 (28168): Guest Log: 00:00:00.005402 main     OS Release: 4.1.19-boot2docker
2019-10-09 16:50:53 (28168): Guest Log: 00:00:00.005472 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-10-09 16:50:53 (28168): Guest Log: 00:00:00.005500:00:00.015925 main     5.0.16 r105871 started. Verbose level = 0
2019-10-09 16:50:53 (28168): Guest Log: 300:00:00.067857 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2019-10-09 16:50:53 (28168): Guest Log: 00:00:00.068101 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2019-10-09 16:50:53 (28168): Guest Log: 0 main     Executable: /sbin/VBoxService
2019-10-09 16:50:53 (28168): Guest Log: 00:00:00.005532 main     Process ID: 729
2019-10-09 16:50:53 (28168): Guest Log: 00:00:00.005533 main     Package type: LINUX_64BITS_GENERIC
2019-10-09 16:50:53 (28168): Guest Log: 00:00:00.015925 main     5.0.16 r105871 started. Verbose level = 0
2019-10-09 16:50:54 (28168): Guest Log: Mounting BOINC shared/...
2019-10-09 16:50:54 (28168): Guest Log: -------------------
2019-10-09 16:50:54 (28168): Guest Log: Wed Oct  9 20:50:53 UTC 2019
2019-10-09 16:50:58 (28168): Guest Log: 00:00:05.087266 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2019-10-09 16:50:59 (28168): Guest Log: Wed Oct  9 20:50:58 UTC 2019
2019-10-09 16:50:59 (28168): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2019-10-09 16:50:59 (28168): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2019-10-09 16:50:59 (28168): Guest Log:     inet 127.0.0.1/8 scope host lo
2019-10-09 16:50:59 (28168): Guest Log:        valid_lft forever preferred_lft forever
2019-10-09 16:50:59 (28168): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2019-10-09 16:50:59 (28168): Guest Log:     link/ether 36:51:6c:09:7b:bb brd ff:ff:ff:ff:ff:ff
2019-10-09 16:50:59 (28168): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2019-10-09 16:50:59 (28168): Guest Log:     link/ether 08:00:27:11:63:a3 brd ff:ff:ff:ff:ff:ff
2019-10-09 16:50:59 (28168): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2019-10-09 16:50:59 (28168): Guest Log:        valid_lft forever preferred_lft forever
2019-10-09 16:50:59 (28168): Guest Log: -------------------
2019-10-09 16:50:59 (28168): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2019-10-09 16:50:59 (28168): Guest Log: Waiting for Docker daemon to start...
2019-10-09 16:51:01 (28168): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2019-10-09 16:51:01 (28168): Guest Log: Running boinc_app...
2019-10-09 16:51:01 (28168): Guest Log: Importing Docker image from BOINC...
2019-10-09 16:51:01 (28168): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-10-09 16:51:01 (28168): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /
2019-10-09 16:51:01 (28168): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-10-09 16:51:01 (28168): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-10-09 16:51:01 (28168): Guest Log: shared                  886.1G     86.6G    799.5G  10% /root/shared
2019-10-09 16:51:01 (28168): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /var/lib/docker/aufs
2019-10-09 16:51:03 (28168): Guest Log: 00:00:10.114773 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2019-10-09 16:51:23 (28168): Guest Log: doing docker load...
2019-10-09 16:51:52 (28168): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-10-09 16:51:52 (28168): Guest Log: tmpfs                     2.6G    803.4M      1.9G  30% /
2019-10-09 16:51:52 (28168): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-10-09 16:51:52 (28168): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-10-09 16:51:52 (28168): Guest Log: shared                  886.1G     86.4G    799.7G  10% /root/shared
2019-10-09 16:51:52 (28168): Guest Log: tmpfs                     2.6G    803.4M      1.9G  30% /var/lib/docker/aufs
2019-10-09 16:51:52 (28168): Guest Log:               total        used        free      shared  buff/cache   available
2019-10-09 16:51:52 (28168): Guest Log: Mem:           3007          50        2108         803         849        2110
2019-10-09 16:51:52 (28168): Guest Log: Swap:           702           0         702
2019-10-09 16:51:52 (28168): Guest Log: Building apps directory...
2019-10-09 16:52:05 (28168): Guest Log: Prerun diagnostics...
2019-10-09 16:52:05 (28168): Guest Log: REPOSITORY           TAG                 IMAGE ID            CREATED             SIZE
2019-10-09 16:52:05 (28168): Guest Log: nanohub_apps_scipy   4                   1c97f9c9808f        22 months ago       627.2 MB
2019-10-09 16:52:05 (28168): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2019-10-09 16:52:05 (28168): Guest Log: 639.3M	/var/lib/docker
2019-10-09 16:52:05 (28168): Guest Log:               total        used        free      shared  buff/cache   available
2019-10-09 16:52:05 (28168): Guest Log: Mem:           3007          50        2106         803         850        2110
2019-10-09 16:52:05 (28168): Guest Log: Swap:           702           0         702
2019-10-09 16:52:05 (28168): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-10-09 16:52:05 (28168): Guest Log: tmpfs                     2.6G    803.4M      1.9G  30% /
2019-10-09 16:52:05 (28168): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-10-09 16:52:05 (28168): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-10-09 16:52:05 (28168): Guest Log: shared                  886.1G     86.5G    799.6G  10% /root/shared
2019-10-09 16:52:05 (28168): Guest Log: tmpfs                     2.6G    803.4M      1.9G  30% /var/lib/docker/aufs
2019-10-09 16:52:05 (28168): Guest Log: Running... 
2019-10-09 16:52:06 (28168): Guest Log: 07517847_070.boinc
2019-10-09 16:52:06 (28168): Guest Log: 07517847_070.sh
2019-10-09 16:52:27 (28168): Guest Log: boinc_app exited (0)
2019-10-09 16:52:27 (28168): Guest Log: Saving results...
2019-10-09 16:52:27 (28168): Guest Log: 07517847_070_output.tar.gz
2019-10-09 16:52:27 (28168): VM Completion File Detected.
2019-10-09 16:52:27 (28168): Powering off VM.
2019-10-09 16:52:28 (28168): Successfully stopped VM.
2019-10-09 16:52:28 (28168): Deregistering VM. (boinc_3d19e5d6983f2d66, slot#0)
2019-10-09 16:52:28 (28168): Removing network bandwidth throttle group from VM.
2019-10-09 16:52:28 (28168): Removing storage controller(s) from VM.
2019-10-09 16:52:28 (28168): Removing VM from VirtualBox.
2019-10-09 16:52:28 (28168): Removing virtual ISO 9660 disk from VirtualBox.
16:52:33 (28168): called boinc_finish(0)

</stderr_txt>
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