Task 63358

Name	06388866_017_1
Workunit	47383
Created	11 Dec 2017, 12:02:43 UTC
Sent	11 Dec 2017, 12:13:10 UTC
Report deadline	11 Dec 2017, 20:13:10 UTC
Received	11 Dec 2017, 13:38:21 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	216
Run time	7 min 42 sec
CPU time	2 min 57 sec
Validate state	Valid
Credit	1.54
Device peak FLOPS	2.24 GFLOPS
Application version	boinc2docker v1.11 (vbox64_mt) x86_64-pc-linux-gnu
Peak working set size	93.42 MB
Peak swap size	3.43 GB
Peak disk usage	1.14 GB
Stderr output

<core_client_version>7.4.23</core_client_version>
<![CDATA[
<stderr_txt>
2017-12-11 08:29:55 (1493): vboxwrapper (7.7.26197): starting
2017-12-11 08:29:55 (1493): Feature: Checkpoint interval offset (325 seconds)
2017-12-11 08:29:55 (1493): Detected: VirtualBox VboxManage Interface (Version: 5.1.8)
2017-12-11 08:29:55 (1493): Detected: Minimum checkpoint interval (600.000000 seconds)
2017-12-11 08:29:58 (1493): Create VM. (boinc_89e33b215ee1592c, slot#4)
2017-12-11 08:29:58 (1493): Updating drive controller type and model for desired configuration.
2017-12-11 08:30:02 (1493): Setting Memory Size for VM. (3072MB)
2017-12-11 08:30:02 (1493): Setting CPU Count for VM. (1)
2017-12-11 08:30:02 (1493): Setting Chipset Options for VM.
2017-12-11 08:30:02 (1493): Setting Boot Options for VM.
2017-12-11 08:30:02 (1493): Setting Network Configuration for NAT.
2017-12-11 08:30:02 (1493): Enabling VM Network Access.
2017-12-11 08:30:02 (1493): Disabling USB Support for VM.
2017-12-11 08:30:02 (1493): Disabling COM Port Support for VM.
2017-12-11 08:30:02 (1493): Disabling LPT Port Support for VM.
2017-12-11 08:30:03 (1493): Disabling Audio Support for VM.
2017-12-11 08:30:03 (1493): Disabling Clipboard Support for VM.
2017-12-11 08:30:03 (1493): Disabling Drag and Drop Support for VM.
2017-12-11 08:30:03 (1493): Adding storage controller(s) to VM.
2017-12-11 08:30:03 (1493): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2017-12-11 08:30:03 (1493): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2017-12-11 08:30:03 (1493): Enabling shared directory for VM.
2017-12-11 08:30:03 (1493): Starting VM. (boinc_89e33b215ee1592c, slot#4)
2017-12-11 08:30:05 (1493): Successfully started VM. (PID = '2566')
2017-12-11 08:30:05 (1493): Reporting VM Process ID to BOINC.
2017-12-11 08:30:05 (1493): Guest Log: BIOS: VirtualBox 5.1.8
2017-12-11 08:30:05 (1493): VM state change detected. (old = 'poweroff', new = 'running')
2017-12-11 08:30:05 (1493): Preference change detected
2017-12-11 08:30:05 (1493): Setting CPU throttle for VM. (75%)
2017-12-11 08:30:05 (1493): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2017-12-11 08:30:07 (1493): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2017-12-11 08:30:07 (1493): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2017-12-11 08:30:07 (1493): Guest Log: BIOS: Boot from Hard Disk 0 failed
2017-12-11 08:30:07 (1493): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2017-12-11 08:30:07 (1493): Guest Log: BIOS: Booting from CD-ROM...
2017-12-11 08:30:10 (1493): Guest Log: BIOS: KBD: unsupported int 16h function 03
2017-12-11 08:30:10 (1493): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2017-12-11 08:30:27 (1493): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2017-12-11 08:30:27 (1493): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2017-12-11 08:30:32 (1493): Guest Log: net.ipv4.ip_forward = 1
2017-12-11 08:30:32 (1493): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2017-12-11 08:30:32 (1493): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2017-12-11 08:30:32 (1493): Guest Log: sysctl: "cannot stat %s" is an unknown key
2017-12-11 08:30:32 (1493): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2017-12-11 08:30:32 (1493): Guest Log: Segmentation fault
2017-12-11 08:30:32 (1493): Guest Log: automount ...
2017-12-11 08:30:33 (1493): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2017-12-11 08:30:33 (1493): Guest Log: automount over.
2017-12-11 08:30:33 (1493): Guest Log: [1;32mSetting hostname to [1;35mboot2docker[0;39m [1;32mDone.[0;39m
2017-12-11 08:30:33 (1493): Guest Log: Mon Dec 11 08:30:31 UTC 2017 dhcp -------------------------------
2017-12-11 08:30:39 (1493): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2017-12-11 08:30:39 (1493): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1314)
2017-12-11 08:30:40 (1493): Guest Log: Mon Dec 11 08:30:38 UTC 2017 dhcp -------------------------------
2017-12-11 08:30:41 (1493): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2017-12-11 08:30:41 (1493): Guest Log: 00:00:00.001067 main     Log opened 2017-12-11T08:30:39.106226000Z
2017-12-11 08:30:41 (1493): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2017-12-11 08:30:41 (1493): Guest Log: 00:00:00.001067 main     Log opened 2017-12-11T08:30:39.106226000Z
2017-12-11 08:30:41 (1493): Guest Log: 00:00:00.007252 main     OS Product: Linux
2017-12-11 08:30:41 (1493): Guest Log: 00:00:00.007439 main     OS Release: 4.1.19-boot2docker
2017-12-11 08:30:41 (1493): Guest Log: 00:00:00.007513 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2017-12-11 08:30:41 (1493): Guest Log: 00:00:00.007589 main     Executable: /sbin/VBoxService
2017-12-11 08:30:41 (1493): Guest Log: 00:00:00.007591 main     Process ID: 739
2017-12-11 08:30:41 (1493): Guest Log: 00:00:00.007593 main     Package type: LINUX_64BITS_GENERIC
2017-12-11 08:30:41 (1493): Guest Log: 00:00:00.007252 main     OS Product: Linux
2017-12-11 08:30:41 (1493): Guest Log: 00:00:00.007439 main     OS Release: 4.1.19-boot2docker
2017-12-11 08:30:41 (1493): Guest Log: 00:00:00.007513 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2017-12-11 08:30:41 (1493): Guest Log: 00:00:00.007589 main     Executable: /sbin/VBoxService
2017-12-11 08:30:41 (1493): Guest Log: 00:00:00.019319 main     5.0.16 r105871 started. Verbose level = 0
2017-12-11 08:30:41 (1493): Guest Log: 00:00:00.007591 main     Process ID: 739
2017-12-11 08:30:41 (1493): Guest Log: 00:00:00.007593 main     Package type: LINUX_64BITS_GENERIC
2017-12-11 08:30:41 (1493): Guest Log: 00:00:00.019319 main     5.0.16 r105871 started. Verbose level = 0
2017-12-11 08:30:41 (1493): Guest Log: 00:00:00.084651 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2017-12-11 08:30:41 (1493): Guest Log: 00:00:00.085051 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2017-12-11 08:30:41 (1493): Guest Log: Mounting BOINC shared/...
2017-12-11 08:30:41 (1493): Guest Log: -------------------
2017-12-11 08:30:41 (1493): Guest Log: Mon Dec 11 13:30:41 UTC 2017
2017-12-11 08:30:46 (1493): Guest Log: 00:00:05.087353 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2017-12-11 08:30:46 (1493): Guest Log: Mon Dec 11 13:30:46 UTC 2017
2017-12-11 08:30:46 (1493): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2017-12-11 08:30:46 (1493): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2017-12-11 08:30:46 (1493): Guest Log:     inet 127.0.0.1/8 scope host lo
2017-12-11 08:30:46 (1493): Guest Log:        valid_lft forever preferred_lft forever
2017-12-11 08:30:46 (1493): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2017-12-11 08:30:47 (1493): Guest Log:     link/ether 26:83:eb:7b:81:9d brd ff:ff:ff:ff:ff:ff
2017-12-11 08:30:47 (1493): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2017-12-11 08:30:47 (1493): Guest Log:     link/ether 08:00:27:52:36:7a brd ff:ff:ff:ff:ff:ff
2017-12-11 08:30:47 (1493): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2017-12-11 08:30:47 (1493): Guest Log:        valid_lft forever preferred_lft forever
2017-12-11 08:30:47 (1493): Guest Log: -------------------
2017-12-11 08:30:47 (1493): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2017-12-11 08:30:47 (1493): Guest Log: Waiting for Docker daemon to start...
2017-12-11 08:30:49 (1493): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2017-12-11 08:30:49 (1493): Guest Log: Running boinc_app...
2017-12-11 08:30:49 (1493): Guest Log: Importing Docker image from BOINC...
2017-12-11 08:30:49 (1493): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2017-12-11 08:30:49 (1493): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /
2017-12-11 08:30:49 (1493): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2017-12-11 08:30:49 (1493): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2017-12-11 08:30:49 (1493): Guest Log: shared                  140.1G     29.9G    110.1G  21% /root/shared
2017-12-11 08:30:49 (1493): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /var/lib/docker/aufs
2017-12-11 08:30:51 (1493): Guest Log: 00:00:10.114052 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2017-12-11 08:31:06 (1493): Guest Log: doing docker load...
2017-12-11 08:31:32 (1493): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2017-12-11 08:31:32 (1493): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2017-12-11 08:31:32 (1493): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2017-12-11 08:31:32 (1493): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2017-12-11 08:31:32 (1493): Guest Log: shared                  140.1G     29.5G    110.6G  21% /root/shared
2017-12-11 08:31:32 (1493): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /var/lib/docker/aufs
2017-12-11 08:31:32 (1493): Guest Log:               total        used        free      shared  buff/cache   available
2017-12-11 08:31:32 (1493): Guest Log: Mem:           3007          50        2254         663         701        2255
2017-12-11 08:31:32 (1493): Guest Log: Swap:           701           0         701
2017-12-11 08:31:32 (1493): Guest Log: Building apps directory...
2017-12-11 08:31:37 (1493): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2017-12-11 08:31:47 (1493): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077_links.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2017-12-11 08:31:47 (1493): Guest Log: mv /root/shared/appsSource/rappture /root/shared/apps/share64/debian7/environ.d
2017-12-11 08:37:18 (1493): Guest Log: Prerun diagnostics...
2017-12-11 08:37:18 (1493): Guest Log: REPOSITORY                    TAG                 IMAGE ID            CREATED             SIZE
2017-12-11 08:37:18 (1493): Guest Log: nanohub_apps_share64_matlab   4                   32c863520615        5 days ago          488.2 MB
2017-12-11 08:37:18 (1493): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2017-12-11 08:37:18 (1493): Guest Log: 499.0M	/var/lib/docker
2017-12-11 08:37:18 (1493): Guest Log:               total        used        free      shared  buff/cache   available
2017-12-11 08:37:18 (1493): Guest Log: Mem:           3007          54        2239         663         713        2249
2017-12-11 08:37:18 (1493): Guest Log: Swap:           701           0         701
2017-12-11 08:37:18 (1493): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2017-12-11 08:37:18 (1493): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2017-12-11 08:37:18 (1493): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2017-12-11 08:37:18 (1493): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2017-12-11 08:37:18 (1493): Guest Log: shared                  140.1G     32.6G    107.5G  23% /root/shared
2017-12-11 08:37:18 (1493): Guest Log: Running... 
2017-12-11 08:37:19 (1493): Guest Log: 06388866_017.boinc
2017-12-11 08:37:19 (1493): Guest Log: 06388866_017.sh
2017-12-11 08:38:00 (1493): Guest Log: boinc_app exited (0)
2017-12-11 08:38:00 (1493): Guest Log: Saving results...
2017-12-11 08:38:00 (1493): Guest Log: 06388866_017_output.tar.gz
2017-12-11 08:38:00 (1493): VM Completion File Detected.
2017-12-11 08:38:00 (1493): Powering off VM.
2017-12-11 08:38:01 (1493): Successfully stopped VM.
2017-12-11 08:38:01 (1493): Deregistering VM. (boinc_89e33b215ee1592c, slot#4)
2017-12-11 08:38:01 (1493): Removing network bandwidth throttle group from VM.
2017-12-11 08:38:01 (1493): Removing storage controller(s) from VM.
2017-12-11 08:38:01 (1493): Removing VM from VirtualBox.
2017-12-11 08:38:01 (1493): Removing virtual ISO 9660 disk from VirtualBox.
08:38:06 (1493): called boinc_finish(0)

</stderr_txt>
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