Task 660109

Name 07034079_267_1
Workunit 322132
Created 1 Feb 2019, 1:06:14 UTC
Sent 1 Feb 2019, 1:06:47 UTC
Report deadline 3 Feb 2019, 1:06:47 UTC
Received 1 Feb 2019, 11:18:34 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 8454
Run time 7 min 14 sec
CPU time 4 min 41 sec
Validate state Valid
Credit 2.78
Device peak FLOPS 2.11 GFLOPS
Application version boinc2docker v1.12 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 1.89 GB
Peak swap size 3.44 GB
Peak disk usage 821.54 MB

Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
2019-02-01 17:56:58 (25348): vboxwrapper (7.7.26197): starting
2019-02-01 17:56:58 (25348): Feature: Checkpoint interval offset (414 seconds)
2019-02-01 17:56:58 (25348): Detected: VirtualBox VboxManage Interface (Version: 5.2.18)
2019-02-01 17:56:58 (25348): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-02-01 17:56:58 (25348): Create VM. (boinc_50da9c187ed8515c, slot#2)
2019-02-01 17:56:58 (25348): Updating drive controller type and model for desired configuration.
2019-02-01 17:56:58 (25348): Setting Memory Size for VM. (3072MB)
2019-02-01 17:56:58 (25348): Setting CPU Count for VM. (1)
2019-02-01 17:56:59 (25348): Setting Chipset Options for VM.
2019-02-01 17:56:59 (25348): Setting Boot Options for VM.
2019-02-01 17:56:59 (25348): Setting Network Configuration for NAT.
2019-02-01 17:56:59 (25348): Enabling VM Network Access.
2019-02-01 17:56:59 (25348): Disabling USB Support for VM.
2019-02-01 17:56:59 (25348): Disabling COM Port Support for VM.
2019-02-01 17:56:59 (25348): Disabling LPT Port Support for VM.
2019-02-01 17:56:59 (25348): Disabling Audio Support for VM.
2019-02-01 17:56:59 (25348): Disabling Clipboard Support for VM.
2019-02-01 17:56:59 (25348): Disabling Drag and Drop Support for VM.
2019-02-01 17:56:59 (25348): Adding storage controller(s) to VM.
2019-02-01 17:57:00 (25348): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2019-02-01 17:57:00 (25348): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-02-01 17:57:00 (25348): Enabling shared directory for VM.
2019-02-01 17:57:00 (25348): Starting VM. (boinc_50da9c187ed8515c, slot#2)
2019-02-01 17:57:02 (25348): Successfully started VM. (PID = '25676')
2019-02-01 17:57:02 (25348): Reporting VM Process ID to BOINC.
2019-02-01 17:57:02 (25348): Guest Log: BIOS: VirtualBox 5.2.18
2019-02-01 17:57:02 (25348): Guest Log: CPUID EDX: 0x078bfbff
2019-02-01 17:57:02 (25348): VM state change detected. (old = 'poweroff', new = 'running')
2019-02-01 17:57:02 (25348): Preference change detected
2019-02-01 17:57:02 (25348): Setting CPU throttle for VM. (100%)
2019-02-01 17:57:10 (25348): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2019-02-01 17:57:13 (25348): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-02-01 17:57:13 (25348): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2019-02-01 17:57:13 (25348): Guest Log: BIOS: Boot from Hard Disk 0 failed
2019-02-01 17:57:13 (25348): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2019-02-01 17:57:13 (25348): Guest Log: BIOS: Booting from CD-ROM...
2019-02-01 17:57:14 (25348): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-02-01 17:57:14 (25348): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2019-02-01 17:57:30 (25348): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-02-01 17:57:30 (25348): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-02-01 17:57:31 (25348): Guest Log: net.ipv4.ip_forward = 1
2019-02-01 17:57:31 (25348): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2019-02-01 17:57:31 (25348): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-02-01 17:57:31 (25348): Guest Log: sysctl: "cannot stat %s" is an unknown key
2019-02-01 17:57:31 (25348): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-02-01 17:57:31 (25348): Guest Log: Segmentation fault
2019-02-01 17:57:31 (25348): Guest Log: automount ...
2019-02-01 17:57:31 (25348): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2019-02-01 17:57:31 (25348): Guest Log: automount over.
2019-02-01 17:57:31 (25348): Guest Log: Setting hostname to boot2docker Done.
2019-02-01 17:57:31 (25348): Guest Log: Fri Feb  1 17:57:28 UTC 2019 dhcp -------------------------------
2019-02-01 17:57:36 (25348): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1066)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00 (1285)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:00 (1286)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00 (1287)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0 (1288)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0/event0 (1289)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00 (1290)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1 (1291)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1/event1 (1292)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00 (1293)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00 (1294)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00 (1295)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00/power_supply/AC (1296)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00 (1297)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/device:01 (1298)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6 (1299)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6/event5 (1300)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1301)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1302)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1303)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1304)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1305)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1306)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1307)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1308)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1309)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00 (1310)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1311)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1312)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1313)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1314)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1315)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1316)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1317)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1318)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1319)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:02 (1320)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1321)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1322)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1323)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1324)
2019-02-01 17:57:36 (25348): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:01 (1325)
2019-02-01 17:57:37 (25348): Guest Log: Fri Feb  1 17:57:34 UTC 2019 dhcp -------------------------------
2019-02-01 17:57:37 (25348): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-02-01 17:57:37 (25348): Guest Log: 00:00:00.000134 main     Log opened 2019-02-01T17:57:34.521255000Z
2019-02-01 17:57:37 (25348): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-02-01 17:57:37 (25348): Guest Log: 00:00:00.000134 main     Log opened 2019-02-01T17:57:34.521255000Z
2019-02-01 17:57:37 (25348): Guest Log: 00:00:00.004046 main     OS Product: Linux
2019-02-01 17:57:37 (25348): Guest Log: 00:00:00.004117 main     OS Release: 4.1.19-boot2docker
2019-02-01 17:57:37 (25348): Guest Log: 00:00:00.004179 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-02-01 17:57:37 (25348): Guest Log: 00:00:00.004221 main     Executable: /sbin/VBoxService
2019-02-01 17:57:37 (25348): Guest Log: 00:00:00.004223 main     Process ID: 790
2019-02-01 17:57:37 (25348): Guest Log: 00:00:00.004224 main     Package type: LINUX_64BITS_GENERIC
2019-02-01 17:57:37 (25348): Guest Log: 00:00:00.004046 main     OS Product: Linux
2019-02-01 17:57:37 (25348): Guest Log: 00:00:00.004117 main     OS Release: 4.1.19-boot2docker
2019-02-01 17:57:37 (25348): Guest Log: 00:00:00.004179 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-02-01 17:57:37 (25348): Guest Log: 00:00:00.004221 main     Executable: /sbin/VBoxService
2019-02-01 17:57:37 (25348): Guest Log: 00:00:00.004223 main     Process ID: 790
2019-02-01 17:57:37 (25348): Guest Log: 00:00:00.004224 main     Package type: LINUX_64BITS_GENERIC
2019-02-01 17:57:37 (25348): Guest Log: 00:00:00.014059 main     5.0.16 r105871 started. Verbose level = 0
2019-02-01 17:57:37 (25348): Guest Log: 00:00:00.014059 main     5.0.16 r105871 started. Verbose level = 0
2019-02-01 17:57:37 (25348): Guest Log: 00:00:00.062671 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2019-02-01 17:57:37 (25348): Guest Log: 00:00:00.062810 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2019-02-01 17:57:37 (25348): Guest Log: Mounting BOINC shared/...
2019-02-01 17:57:37 (25348): Guest Log: -------------------
2019-02-01 17:57:37 (25348): Guest Log: Fri Feb  1 10:57:37 UTC 2019
2019-02-01 17:57:42 (25348): Guest Log: 00:00:05.063958 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2019-02-01 17:57:42 (25348): Guest Log: Fri Feb  1 10:57:42 UTC 2019
2019-02-01 17:57:42 (25348): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2019-02-01 17:57:42 (25348): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2019-02-01 17:57:42 (25348): Guest Log:     inet 127.0.0.1/8 scope host lo
2019-02-01 17:57:42 (25348): Guest Log:        valid_lft forever preferred_lft forever
2019-02-01 17:57:42 (25348): Guest Log:     inet6 ::1/128 scope host 
2019-02-01 17:57:42 (25348): Guest Log:        valid_lft forever preferred_lft forever
2019-02-01 17:57:42 (25348): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2019-02-01 17:57:42 (25348): Guest Log:     link/ether d2:a6:f5:8f:86:6c brd ff:ff:ff:ff:ff:ff
2019-02-01 17:57:42 (25348): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2019-02-01 17:57:42 (25348): Guest Log:     link/ether 08:00:27:da:1f:e7 brd ff:ff:ff:ff:ff:ff
2019-02-01 17:57:42 (25348): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2019-02-01 17:57:42 (25348): Guest Log:        valid_lft forever preferred_lft forever
2019-02-01 17:57:42 (25348): Guest Log:     inet6 fe80::a00:27ff:feda:1fe7/64 scope link 
2019-02-01 17:57:42 (25348): Guest Log:        valid_lft forever preferred_lft forever
2019-02-01 17:57:42 (25348): Guest Log: -------------------
2019-02-01 17:57:42 (25348): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2019-02-01 17:57:42 (25348): Guest Log: Waiting for Docker daemon to start...
2019-02-01 17:57:46 (25348): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2019-02-01 17:57:46 (25348): Guest Log: Running boinc_app...
2019-02-01 17:57:46 (25348): Guest Log: Importing Docker image from BOINC...
2019-02-01 17:57:46 (25348): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-02-01 17:57:46 (25348): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /
2019-02-01 17:57:46 (25348): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-02-01 17:57:46 (25348): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-02-01 17:57:46 (25348): Guest Log: shared                   57.9G     26.8G     31.1G  46% /root/shared
2019-02-01 17:57:46 (25348): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /var/lib/docker/aufs
2019-02-01 17:57:47 (25348): Guest Log: 00:00:10.065662 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2019-02-01 17:58:03 (25348): Guest Log: doing docker load...
2019-02-01 17:58:27 (25348): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-02-01 17:58:27 (25348): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2019-02-01 17:58:27 (25348): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-02-01 17:58:27 (25348): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-02-01 17:58:27 (25348): Guest Log: shared                   57.9G     26.7G     31.3G  46% /root/shared
2019-02-01 17:58:27 (25348): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /var/lib/docker/aufs
2019-02-01 17:58:27 (25348): Guest Log:               total        used        free      shared  buff/cache   available
2019-02-01 17:58:27 (25348): Guest Log: Mem:           3007          51        2254         663         701        2254
2019-02-01 17:58:27 (25348): Guest Log: Swap:           700           0         700
2019-02-01 17:58:27 (25348): Guest Log: Building apps directory...
2019-02-01 18:00:55 (25348): Guest Log: Prerun diagnostics...
2019-02-01 18:00:55 (25348): Guest Log: REPOSITORY                    TAG                 IMAGE ID            CREATED             SIZE
2019-02-01 18:00:55 (25348): Guest Log: nanohub_apps_share64_matlab   4                   32c863520615        14 months ago       488.2 MB
2019-02-01 18:00:55 (25348): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2019-02-01 18:00:55 (25348): Guest Log: 499.0M	/var/lib/docker
2019-02-01 18:00:55 (25348): Guest Log:               total        used        free      shared  buff/cache   available
2019-02-01 18:00:55 (25348): Guest Log: Mem:           3007          54        2239         663         713        2249
2019-02-01 18:00:55 (25348): Guest Log: Swap:           700           0         700
2019-02-01 18:00:55 (25348): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-02-01 18:00:55 (25348): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2019-02-01 18:00:55 (25348): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-02-01 18:00:55 (25348): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-02-01 18:00:55 (25348): Guest Log: shared                   57.9G     27.2G     30.8G  47% /root/shared
2019-02-01 18:00:55 (25348): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /var/lib/docker/aufs
2019-02-01 18:00:55 (25348): Guest Log: Running... 
2019-02-01 18:00:55 (25348): Guest Log: 07034079_267.boinc
2019-02-01 18:00:55 (25348): Guest Log: 07034079_267.sh
2019-02-01 18:04:05 (25348): Guest Log: boinc_app exited (0)
2019-02-01 18:04:05 (25348): Guest Log: Saving results...
2019-02-01 18:04:05 (25348): Guest Log: 07034079_267_output.tar.gz
2019-02-01 18:04:05 (25348): VM Completion File Detected.
2019-02-01 18:04:05 (25348): Powering off VM.
2019-02-01 18:04:05 (25348): Successfully stopped VM.
2019-02-01 18:04:05 (25348): Deregistering VM. (boinc_50da9c187ed8515c, slot#2)
2019-02-01 18:04:05 (25348): Removing network bandwidth throttle group from VM.
2019-02-01 18:04:05 (25348): Removing storage controller(s) from VM.
2019-02-01 18:04:05 (25348): Removing VM from VirtualBox.
2019-02-01 18:04:05 (25348): Removing virtual ISO 9660 disk from VirtualBox.
18:04:10 (25348): called boinc_finish(0)

</stderr_txt>
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