Task 660114

Name 07034079_293_1
Workunit 322158
Created 1 Feb 2019, 1:06:14 UTC
Sent 1 Feb 2019, 1:06:47 UTC
Report deadline 3 Feb 2019, 1:06:47 UTC
Received 1 Feb 2019, 11:18:34 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 8454
Run time 5 min 26 sec
CPU time 3 min 27 sec
Validate state Valid
Credit 2.09
Device peak FLOPS 2.11 GFLOPS
Application version boinc2docker v1.12 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 1.89 GB
Peak swap size 3.50 GB
Peak disk usage 821.61 MB

Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
2019-02-01 17:51:26 (21251): vboxwrapper (7.7.26197): starting
2019-02-01 17:51:26 (21251): Feature: Checkpoint interval offset (543 seconds)
2019-02-01 17:51:26 (21251): Detected: VirtualBox VboxManage Interface (Version: 5.2.18)
2019-02-01 17:51:26 (21251): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-02-01 17:51:27 (21251): Create VM. (boinc_4a447ebb826e753b, slot#2)
2019-02-01 17:51:27 (21251): Updating drive controller type and model for desired configuration.
2019-02-01 17:51:27 (21251): Setting Memory Size for VM. (3072MB)
2019-02-01 17:51:27 (21251): Setting CPU Count for VM. (1)
2019-02-01 17:51:27 (21251): Setting Chipset Options for VM.
2019-02-01 17:51:27 (21251): Setting Boot Options for VM.
2019-02-01 17:51:27 (21251): Setting Network Configuration for NAT.
2019-02-01 17:51:27 (21251): Enabling VM Network Access.
2019-02-01 17:51:27 (21251): Disabling USB Support for VM.
2019-02-01 17:51:27 (21251): Disabling COM Port Support for VM.
2019-02-01 17:51:28 (21251): Disabling LPT Port Support for VM.
2019-02-01 17:51:28 (21251): Disabling Audio Support for VM.
2019-02-01 17:51:28 (21251): Disabling Clipboard Support for VM.
2019-02-01 17:51:28 (21251): Disabling Drag and Drop Support for VM.
2019-02-01 17:51:28 (21251): Adding storage controller(s) to VM.
2019-02-01 17:51:28 (21251): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2019-02-01 17:51:28 (21251): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-02-01 17:51:28 (21251): Enabling shared directory for VM.
2019-02-01 17:51:28 (21251): Starting VM. (boinc_4a447ebb826e753b, slot#2)
2019-02-01 17:51:30 (21251): Successfully started VM. (PID = '21578')
2019-02-01 17:51:30 (21251): Reporting VM Process ID to BOINC.
2019-02-01 17:51:30 (21251): Guest Log: BIOS: VirtualBox 5.2.18
2019-02-01 17:51:30 (21251): Guest Log: CPUID EDX: 0x078bfbff
2019-02-01 17:51:30 (21251): VM state change detected. (old = 'poweroff', new = 'running')
2019-02-01 17:51:31 (21251): Preference change detected
2019-02-01 17:51:31 (21251): Setting CPU throttle for VM. (100%)
2019-02-01 17:51:39 (21251): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2019-02-01 17:51:41 (21251): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-02-01 17:51:41 (21251): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2019-02-01 17:51:41 (21251): Guest Log: BIOS: Boot from Hard Disk 0 failed
2019-02-01 17:51:41 (21251): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2019-02-01 17:51:41 (21251): Guest Log: BIOS: Booting from CD-ROM...
2019-02-01 17:51:53 (21251): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-02-01 17:51:53 (21251): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2019-02-01 17:52:08 (21251): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-02-01 17:52:08 (21251): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-02-01 17:52:08 (21251): Guest Log: net.ipv4.ip_forward = 1
2019-02-01 17:52:08 (21251): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2019-02-01 17:52:08 (21251): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-02-01 17:52:08 (21251): Guest Log: sysctl: "cannot stat %s" is an unknown key
2019-02-01 17:52:08 (21251): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-02-01 17:52:08 (21251): Guest Log: Segmentation fault
2019-02-01 17:52:08 (21251): Guest Log: automount ...
2019-02-01 17:52:08 (21251): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2019-02-01 17:52:08 (21251): Guest Log: automount over.
2019-02-01 17:52:08 (21251): Guest Log: Setting hostname to boot2docker Done.
2019-02-01 17:52:08 (21251): Guest Log: Fri Feb  1 17:52:07 UTC 2019 dhcp -------------------------------
2019-02-01 17:52:13 (21251): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2019-02-01 17:52:13 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1066)
2019-02-01 17:52:13 (21251): Guest Log:   /sys/devices/LNXSYSTM:00 (1285)
2019-02-01 17:52:13 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:00 (1286)
2019-02-01 17:52:13 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00 (1287)
2019-02-01 17:52:13 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0 (1288)
2019-02-01 17:52:13 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0/event0 (1289)
2019-02-01 17:52:13 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00 (1290)
2019-02-01 17:52:13 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1 (1291)
2019-02-01 17:52:13 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1/event1 (1292)
2019-02-01 17:52:13 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00 (1293)
2019-02-01 17:52:13 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00 (1294)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00 (1295)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00/power_supply/AC (1296)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00 (1297)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/device:01 (1298)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6 (1299)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6/event5 (1300)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1301)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1302)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1303)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1304)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1305)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1306)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1307)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1308)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1309)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00 (1310)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1311)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1312)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1313)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1314)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1315)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1316)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1317)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1318)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1319)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:02 (1320)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1321)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1322)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1323)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1324)
2019-02-01 17:52:14 (21251): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:01 (1325)
2019-02-01 17:52:15 (21251): Guest Log: Fri Feb  1 17:52:13 UTC 2019 dhcp -------------------------------
2019-02-01 17:52:15 (21251): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-02-01 17:52:15 (21251): Guest Log: 00:00:00.000123 main     Log opened 2019-02-01T17:52:13.158804000Z
2019-02-01 17:52:15 (21251): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-02-01 17:52:15 (21251): Guest Log: 00:00:00.000123 main     Log opened 2019-02-01T17:52:13.158804000Z
2019-02-01 17:52:15 (21251): Guest Log: 00:00:00.004194 main     OS Product: Linux
2019-02-01 17:52:15 (21251): Guest Log: 00:00:00.004283 main     OS Release: 4.1.19-boot2docker
2019-02-01 17:52:15 (21251): Guest Log: 00:00:00.004351 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-02-01 17:52:15 (21251): Guest Log: 00:00:00.004396 main     Executable: /sbin/VBoxService
2019-02-01 17:52:15 (21251): Guest Log: 00:00:00.004398 main     Process ID: 729
2019-02-01 17:52:15 (21251): Guest Log: 00:00:00.004400 main     Package type: LINUX_64BITS_GENERIC
2019-02-01 17:52:15 (21251): Guest Log: 00:00:00.004194 main     OS Product: Linux
2019-02-01 17:52:15 (21251): Guest Log: 00:00:00.004283 main     OS Release: 4.1.19-boot2docker
2019-02-01 17:52:15 (21251): Guest Log: 00:00:00.004351 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-02-01 17:52:15 (21251): Guest Log: 00:00:00.004396 main     Executable: /sbin/VBoxService
2019-02-01 17:52:15 (21251): Guest Log: 00:00:00.004398 main     Process ID: 729
2019-02-01 17:52:15 (21251): Guest Log: 00:00:00.004400 main     Package type: LINUX_64BITS_GENERIC
2019-02-01 17:52:15 (21251): Guest Log: 00:00:00.014214 main     5.0.16 r105871 started. Verbose level = 0
2019-02-01 17:52:15 (21251): Guest Log: 00:00:00.014214 main     5.0.16 r105871 started. Verbose level = 0
2019-02-01 17:52:15 (21251): Guest Log: 00:00:00.042391 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2019-02-01 17:52:15 (21251): Guest Log: 00:00:00.042497 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2019-02-01 17:52:15 (21251): Guest Log: Mounting BOINC shared/...
2019-02-01 17:52:15 (21251): Guest Log: -------------------
2019-02-01 17:52:15 (21251): Guest Log: Fri Feb  1 10:52:14 UTC 2019
2019-02-01 17:52:20 (21251): Guest Log: 00:00:05.068457 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2019-02-01 17:52:20 (21251): Guest Log: Fri Feb  1 10:52:19 UTC 2019
2019-02-01 17:52:20 (21251): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2019-02-01 17:52:20 (21251): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2019-02-01 17:52:20 (21251): Guest Log:     inet 127.0.0.1/8 scope host lo
2019-02-01 17:52:20 (21251): Guest Log:        valid_lft forever preferred_lft forever
2019-02-01 17:52:20 (21251): Guest Log:     inet6 ::1/128 scope host 
2019-02-01 17:52:20 (21251): Guest Log:        valid_lft forever preferred_lft forever
2019-02-01 17:52:20 (21251): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2019-02-01 17:52:20 (21251): Guest Log:     link/ether 3e:ec:32:4c:53:4c brd ff:ff:ff:ff:ff:ff
2019-02-01 17:52:20 (21251): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2019-02-01 17:52:20 (21251): Guest Log:     link/ether 08:00:27:34:70:23 brd ff:ff:ff:ff:ff:ff
2019-02-01 17:52:20 (21251): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2019-02-01 17:52:20 (21251): Guest Log:        valid_lft forever preferred_lft forever
2019-02-01 17:52:20 (21251): Guest Log:     inet6 fe80::a00:27ff:fe34:7023/64 scope link 
2019-02-01 17:52:20 (21251): Guest Log:        valid_lft forever preferred_lft forever
2019-02-01 17:52:20 (21251): Guest Log: -------------------
2019-02-01 17:52:20 (21251): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2019-02-01 17:52:20 (21251): Guest Log: Waiting for Docker daemon to start...
2019-02-01 17:52:21 (21251): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2019-02-01 17:52:21 (21251): Guest Log: Running boinc_app...
2019-02-01 17:52:21 (21251): Guest Log: Importing Docker image from BOINC...
2019-02-01 17:52:21 (21251): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-02-01 17:52:21 (21251): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /
2019-02-01 17:52:21 (21251): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-02-01 17:52:21 (21251): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-02-01 17:52:21 (21251): Guest Log: shared                   57.9G     26.8G     31.1G  46% /root/shared
2019-02-01 17:52:21 (21251): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /var/lib/docker/aufs
2019-02-01 17:52:24 (21251): Guest Log: 00:00:10.071472 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2019-02-01 17:52:41 (21251): Guest Log: doing docker load...
2019-02-01 17:53:04 (21251): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-02-01 17:53:04 (21251): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2019-02-01 17:53:04 (21251): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-02-01 17:53:04 (21251): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-02-01 17:53:04 (21251): Guest Log: shared                   57.9G     26.7G     31.3G  46% /root/shared
2019-02-01 17:53:04 (21251): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /var/lib/docker/aufs
2019-02-01 17:53:04 (21251): Guest Log:               total        used        free      shared  buff/cache   available
2019-02-01 17:53:04 (21251): Guest Log: Mem:           3007          49        2256         663         701        2257
2019-02-01 17:53:04 (21251): Guest Log: Swap:           703           0         703
2019-02-01 17:53:04 (21251): Guest Log: Building apps directory...
2019-02-01 17:55:03 (21251): Guest Log: Prerun diagnostics...
2019-02-01 17:55:04 (21251): Guest Log: REPOSITORY                    TAG                 IMAGE ID            CREATED             SIZE
2019-02-01 17:55:04 (21251): Guest Log: nanohub_apps_share64_matlab   4                   32c863520615        14 months ago       488.2 MB
2019-02-01 17:55:04 (21251): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2019-02-01 17:55:04 (21251): Guest Log: 499.0M	/var/lib/docker
2019-02-01 17:55:04 (21251): Guest Log:               total        used        free      shared  buff/cache   available
2019-02-01 17:55:04 (21251): Guest Log: Mem:           3007          52        2241         663         713        2251
2019-02-01 17:55:04 (21251): Guest Log: Swap:           703           0         703
2019-02-01 17:55:04 (21251): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-02-01 17:55:04 (21251): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2019-02-01 17:55:04 (21251): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-02-01 17:55:04 (21251): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-02-01 17:55:04 (21251): Guest Log: shared                   57.9G     27.2G     30.8G  47% /root/shared
2019-02-01 17:55:04 (21251): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /var/lib/docker/aufs
2019-02-01 17:55:04 (21251): Guest Log: Running... 
2019-02-01 17:55:05 (21251): Guest Log: 07034079_293.boinc
2019-02-01 17:55:05 (21251): Guest Log: 07034079_293.sh
2019-02-01 17:56:44 (21251): Guest Log: boinc_app exited (0)
2019-02-01 17:56:44 (21251): Guest Log: Saving results...
2019-02-01 17:56:44 (21251): Guest Log: 07034079_293_output.tar.gz
2019-02-01 17:56:44 (21251): VM Completion File Detected.
2019-02-01 17:56:44 (21251): Powering off VM.
2019-02-01 17:56:45 (21251): Successfully stopped VM.
2019-02-01 17:56:45 (21251): Deregistering VM. (boinc_4a447ebb826e753b, slot#2)
2019-02-01 17:56:45 (21251): Removing network bandwidth throttle group from VM.
2019-02-01 17:56:45 (21251): Removing storage controller(s) from VM.
2019-02-01 17:56:45 (21251): Removing VM from VirtualBox.
2019-02-01 17:56:45 (21251): Removing virtual ISO 9660 disk from VirtualBox.
17:56:50 (21251): called boinc_finish(0)

</stderr_txt>
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