Task 7608552

Name 07576671_22_2
Workunit 6232225
Created 16 Nov 2019, 12:01:19 UTC
Sent 16 Nov 2019, 12:01:34 UTC
Report deadline 21 Nov 2019, 12:01:34 UTC
Received 12 May 2020, 14:07:52 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 194 (0x000000C2) EXIT_ABORTED_BY_CLIENT
Computer ID 3162
Run time 5 min 35 sec
CPU time 4 min 43 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 2.21 GFLOPS
Application version boinc2docker v1.12 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 177.83 MB
Peak swap size 3.79 GB
Peak disk usage 941.54 MB

Stderr output

<core_client_version>7.9.2</core_client_version>
<![CDATA[
<message>
finish file present too long</message>
<stderr_txt>
2019-11-17 11:51:03 (13844): vboxwrapper (7.7.26197): starting
2019-11-17 11:51:04 (13844): Feature: Checkpoint interval offset (234 seconds)
2019-11-17 11:51:04 (13844): Detected: VirtualBox VboxManage Interface (Version: 5.2.34)
2019-11-17 11:51:04 (13844): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-11-17 11:51:05 (13844): Create VM. (boinc_ec86ee48543738e7, slot#20)
2019-11-17 11:51:05 (13844): Updating drive controller type and model for desired configuration.
2019-11-17 11:51:06 (13844): Setting Memory Size for VM. (3072MB)
2019-11-17 11:51:06 (13844): Setting CPU Count for VM. (1)
2019-11-17 11:51:06 (13844): Setting Chipset Options for VM.
2019-11-17 11:51:07 (13844): Setting Boot Options for VM.
2019-11-17 11:51:07 (13844): Setting Network Configuration for NAT.
2019-11-17 11:51:07 (13844): Enabling VM Network Access.
2019-11-17 11:51:08 (13844): Disabling USB Support for VM.
2019-11-17 11:51:08 (13844): Disabling COM Port Support for VM.
2019-11-17 11:51:09 (13844): Disabling LPT Port Support for VM.
2019-11-17 11:51:09 (13844): Disabling Audio Support for VM.
2019-11-17 11:51:10 (13844): Disabling Clipboard Support for VM.
2019-11-17 11:51:10 (13844): Disabling Drag and Drop Support for VM.
2019-11-17 11:51:10 (13844): Adding storage controller(s) to VM.
2019-11-17 11:51:11 (13844): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2019-11-17 11:51:12 (13844): Adding VirtualBox Guest Additions to VM.
2019-11-17 11:51:12 (13844): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-11-17 11:51:12 (13844): Enabling shared directory for VM.
2019-11-17 11:51:13 (13844): Starting VM. (boinc_ec86ee48543738e7, slot#20)
2019-11-17 11:51:16 (13844): Successfully started VM. (PID = '15519')
2019-11-17 11:51:16 (13844): Reporting VM Process ID to BOINC.
2019-11-17 11:51:17 (13844): Guest Log: BIOS: VirtualBox 5.2.34
2019-11-17 11:51:17 (13844): Guest Log: CPUID EDX: 0x078bfbff
2019-11-17 11:51:19 (13844): VM state change detected. (old = 'poweroff', new = 'running')
2019-11-17 11:51:19 (13844): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-11-17 11:51:19 (13844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2019-11-17 11:51:19 (13844): Guest Log: BIOS: Boot from Hard Disk 0 failed
2019-11-17 11:51:19 (13844): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2019-11-17 11:51:19 (13844): Guest Log: BIOS: Booting from CD-ROM...
2019-11-17 11:51:20 (13844): Preference change detected
2019-11-17 11:51:20 (13844): Setting CPU throttle for VM. (100%)
2019-11-17 11:51:21 (13844): Setting checkpoint interval to 3000 seconds. (Higher value of (Preference: 3000 seconds) or (Vbox_job.xml: 600 seconds))
2019-11-17 11:51:23 (13844): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-11-17 11:51:23 (13844): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2019-11-17 11:51:38 (13844): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-11-17 11:51:38 (13844): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-11-17 11:51:42 (13844): Guest Log: net.ipv4.ip_forward = 1
2019-11-17 11:51:42 (13844): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2019-11-17 11:51:42 (13844): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-11-17 11:51:42 (13844): Guest Log: sysctl: "cannot stat %s" is an unknown key
2019-11-17 11:51:42 (13844): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-11-17 11:51:42 (13844): Guest Log: Segmentation fault
2019-11-17 11:51:42 (13844): Guest Log: automount ...
2019-11-17 11:51:42 (13844): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2019-11-17 11:51:42 (13844): Guest Log: automount over.
2019-11-17 11:51:42 (13844): Guest Log: Setting hostname to boot2docker Done.
2019-11-17 11:51:42 (13844): Guest Log: Sun Nov 17 11:51:39 UTC 2019 dhcp -------------------------------
2019-11-17 11:51:48 (13844): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata1/host0/target0:0:0/0:0:0:0/block/sr0 (1107)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata3/host2/target2:0:0/2:0:0:0/block/sr1 (1123)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1338)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0 (1358)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata1/ata_port/ata1 (1359)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata1/host0 (1360)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata1/host0/scsi_host/host0 (1361)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata1/host0/target0:0:0 (1362)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata1/host0/target0:0:0/0:0:0:0 (1363)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata1/host0/target0:0:0/0:0:0:0/block/sr0 (1364)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata1/host0/target0:0:0/0:0:0:0/bsg/0:0:0:0 (1365)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata1/host0/target0:0:0/0:0:0:0/scsi_device/0:0:0:0 (1366)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata1/host0/target0:0:0/0:0:0:0/scsi_generic/sg0 (1367)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata1/link1/ata_link/link1 (1368)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata1/link1/dev1.0/ata_device/dev1.0 (1369)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata2/ata_port/ata2 (1370)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata2/host1 (1371)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata2/host1/scsi_host/host1 (1372)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata2/link2/ata_link/link2 (1373)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata2/link2/dev2.0/ata_device/dev2.0 (1374)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata3/ata_port/ata3 (1375)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata3/host2 (1376)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata3/host2/scsi_host/host2 (1377)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata3/host2/target2:0:0 (1378)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata3/host2/target2:0:0/2:0:0:0 (1379)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata3/host2/target2:0:0/2:0:0:0/block/sr1 (1380)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata3/host2/target2:0:0/2:0:0:0/bsg/2:0:0:0 (1381)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata3/host2/target2:0:0/2:0:0:0/scsi_device/2:0:0:0 (1382)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata3/host2/target2:0:0/2:0:0:0/scsi_generic/sg1 (1383)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata3/link3/ata_link/link3 (1384)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata3/link3/dev3.0/ata_device/dev3.0 (1385)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata1/host0/target0:0:0/0:0:0:0/block/sr0 (1563)
2019-11-17 11:51:48 (13844): Guest Log:   /sys/devices/pci0000:00/0000:00:0d.0/ata3/host2/target2:0:0/2:0:0:0/block/sr1 (1564)
2019-11-17 11:51:48 (13844): Guest Log: Sun Nov 17 11:51:45 UTC 2019 dhcp -------------------------------
2019-11-17 11:51:48 (13844): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-11-17 11:51:48 (13844): Guest Log: 00:00:00.000146 main     Log opened 2019-11-17T11:51:45.390928000Z
2019-11-17 11:51:48 (13844): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-11-17 11:51:48 (13844): Guest Log: 00:00:00.000146 main     Log opened 2019-11-17T11:51:45.390928000Z
2019-11-17 11:51:48 (13844): Guest Log: 00:00:00.004609 main     OS Product: Linux
2019-11-17 11:51:48 (13844): Guest Log: 00:00:00.004680 main     OS Release: 4.1.19-boot2docker
2019-11-17 11:51:48 (13844): Guest Log: 00:00:00.004736 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-11-17 11:51:48 (13844): Guest Log: 00:00:00.004785 main     Executable: /sbin/VBoxService
2019-11-17 11:51:48 (13844): Guest Log: 00:00:00.004793 main     Process ID: 801
2019-11-17 11:51:48 (13844): Guest Log: 00:00:00.004794 main     Package type: LINUX_64BITS_GENERIC
2019-11-17 11:51:48 (13844): Guest Log: 00:00:00.004609 main     OS Product: Linux
2019-11-17 11:51:48 (13844): Guest Log: 00:00:00.004680 main     OS Release: 4.1.19-boot2docker
2019-11-17 11:51:48 (13844): Guest Log: 00:00:00.004785 main     Executable: /sbin/VBoxService
2019-11-17 11:51:48 (13844): Guest Log: 00:00:00.004793 main     Process ID: 801
2019-11-17 11:51:48 (13844): Guest Log: 00:00:00.004794 main     Package type: LINUX_64BITS_GENERIC
2019-11-17 11:51:48 (13844): Guest Log: 00:00:00.057568 main     5.0.16 r105871 started. Verbose level = 0
2019-11-17 11:51:48 (13844): Guest Log: 00:00:00.057568 main     5.0.16 r105871 started. Verbose level = 0
2019-11-17 11:51:48 (13844): Guest Log: 00:00:00.075378 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2019-11-17 11:51:48 (13844): Guest Log: 00:00:00.075473 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2019-11-17 11:51:48 (13844): Guest Log: Mounting BOINC shared/...
2019-11-17 11:51:48 (13844): Guest Log: -------------------
2019-11-17 11:51:54 (13844): Guest Log: 00:00:05.077597 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2019-11-17 11:51:54 (13844): Guest Log: Sun Nov 17 17:53:13 UTC 2019
2019-11-17 11:51:54 (13844): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2019-11-17 11:51:54 (13844): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2019-11-17 11:51:54 (13844): Guest Log:     inet 127.0.0.1/8 scope host lo
2019-11-17 11:51:54 (13844): Guest Log:        valid_lft forever preferred_lft forever
2019-11-17 11:51:54 (13844): Guest Log:     inet6 ::1/128 scope host 
2019-11-17 11:51:54 (13844): Guest Log:        valid_lft forever preferred_lft forever
2019-11-17 11:51:54 (13844): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2019-11-17 11:51:54 (13844): Guest Log:     link/ether fe:8c:a4:9c:e5:f4 brd ff:ff:ff:ff:ff:ff
2019-11-17 11:51:54 (13844): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2019-11-17 11:51:54 (13844): Guest Log:     link/ether 08:00:27:57:ab:41 brd ff:ff:ff:ff:ff:ff
2019-11-17 11:51:54 (13844): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2019-11-17 11:51:54 (13844): Guest Log:        valid_lft forever preferred_lft forever
2019-11-17 11:51:54 (13844): Guest Log:     inet6 fe80::a00:27ff:fe57:ab41/64 scope link 
2019-11-17 11:51:54 (13844): Guest Log:        valid_lft forever preferred_lft forever
2019-11-17 11:51:54 (13844): Guest Log: -------------------
2019-11-17 11:51:54 (13844): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2019-11-17 11:51:54 (13844): Guest Log: Waiting for Docker daemon to start...
2019-11-17 11:51:57 (13844): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2019-11-17 11:51:57 (13844): Guest Log: Running boinc_app...
2019-11-17 11:51:57 (13844): Guest Log: Importing Docker image from BOINC...
2019-11-17 11:51:57 (13844): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-11-17 11:51:57 (13844): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /
2019-11-17 11:51:57 (13844): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-11-17 11:51:57 (13844): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-11-17 11:51:57 (13844): Guest Log: shared                   61.2G     24.1G     37.1G  39% /root/shared
2019-11-17 11:51:57 (13844): Guest Log: tmpfs                     2.6G    164.2M      2.5G   6% /var/lib/docker/aufs
2019-11-17 11:52:02 (13844): Guest Log: 00:00:10.082711 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2019-11-17 11:52:10 (13844): Guest Log: doing docker load...
2019-11-17 11:52:35 (13844): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-11-17 11:52:35 (13844): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2019-11-17 11:52:35 (13844): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-11-17 11:52:35 (13844): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /var/lib/docker/aufs
2019-11-17 11:52:35 (13844): Guest Log:               total        used        free      shared  buff/cache   available
2019-11-17 11:52:35 (13844): Guest Log: Mem:           3007          53        2252         663         701        2252
2019-11-17 11:52:35 (13844): Guest Log: Swap:           702           0         702
2019-11-17 11:52:35 (13844): Guest Log: Building apps directory...
2019-11-17 11:52:35 (13844): Guest Log: tar: ./r2/bin/main_fin_mcr/.META/manifest.xml: time stamp 2035-10-29 06:32:22 is 503239107.759323365 s in the future
2019-11-17 11:57:12 (13844): Guest Log: Prerun diagnostics...
2019-11-17 11:57:12 (13844): Guest Log: REPOSITORY                    TAG                 IMAGE ID            CREATED             SIZE
2019-11-17 11:57:12 (13844): Guest Log: nanohub_apps_share64_matlab   4                   32c863520615        23 months ago       488.2 MB
2019-11-17 11:57:12 (13844): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2019-11-17 11:57:12 (13844): Guest Log: 499.0M	/var/lib/docker
2019-11-17 11:57:12 (13844): Guest Log:               total        used        free      shared  buff/cache   available
2019-11-17 11:57:12 (13844): Guest Log: Mem:           3007          54        2215         663         737        2245
2019-11-17 11:57:12 (13844): Guest Log: Swap:           702           0         702
2019-11-17 11:57:12 (13844): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-11-17 11:57:12 (13844): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2019-11-17 11:57:12 (13844): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-11-17 11:57:12 (13844): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-11-17 11:57:12 (13844): Guest Log: shared                   61.2G     26.7G     34.6G  44% /root/shared
2019-11-17 11:57:12 (13844): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /var/lib/docker/aufs
2019-11-17 11:57:12 (13844): Guest Log: Running... 
2019-11-17 11:57:12 (13844): Guest Log: 07576671_22.boinc
2019-11-17 11:57:12 (13844): Guest Log: 07576671_22.sh
2019-11-17 11:57:36 (13844): Guest Log: boinc_app exited (0)
2019-11-17 11:57:36 (13844): Guest Log: Saving results...
2019-11-17 11:57:36 (13844): Guest Log: 07576671_22_output.tar.gz
2019-11-17 11:57:36 (13844): VM Completion File Detected.
2019-11-17 11:57:36 (13844): Powering off VM.
2019-11-17 11:57:36 (13844): Successfully stopped VM.
2019-11-17 11:57:36 (13844): Deregistering VM. (boinc_ec86ee48543738e7, slot#20)
2019-11-17 11:57:36 (13844): Removing network bandwidth throttle group from VM.
2019-11-17 11:57:36 (13844): Removing storage controller(s) from VM.
2019-11-17 11:57:36 (13844): Removing VM from VirtualBox.
2019-11-17 11:57:36 (13844): Removing virtual ISO 9660 disk from VirtualBox.
11:57:41 (13844): called boinc_finish(0)

</stderr_txt>
]]>


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