Task 7880818

Name 07578714_03_2
Workunit 6277806
Created 27 Nov 2019, 12:53:33 UTC
Sent 27 Nov 2019, 14:55:56 UTC
Report deadline 2 Dec 2019, 14:55:56 UTC
Received 28 Nov 2019, 1:11:03 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 217
Run time 10 min 17 sec
CPU time 7 min 22 sec
Validate state Valid
Credit 2.62
Device peak FLOPS 2.23 GFLOPS
Application version boinc2docker v1.12 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 93.66 MB
Peak swap size 3.43 GB
Peak disk usage 1.00 GB

Stderr output

<core_client_version>7.4.23</core_client_version>
<![CDATA[
<stderr_txt>
2019-11-27 19:28:13 (12056): vboxwrapper (7.7.26197): starting
2019-11-27 19:28:14 (12056): Feature: Checkpoint interval offset (364 seconds)
2019-11-27 19:28:14 (12056): Detected: VirtualBox VboxManage Interface (Version: 5.1.8)
2019-11-27 19:28:14 (12056): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-11-27 19:28:14 (12056): Create VM. (boinc_9043fb414ce4e4a6, slot#5)
2019-11-27 19:28:14 (12056): Updating drive controller type and model for desired configuration.
2019-11-27 19:28:24 (12056): Setting Memory Size for VM. (3072MB)
2019-11-27 19:28:24 (12056): Setting CPU Count for VM. (1)
2019-11-27 19:28:24 (12056): Setting Chipset Options for VM.
2019-11-27 19:28:24 (12056): Setting Boot Options for VM.
2019-11-27 19:28:25 (12056): Setting Network Configuration for NAT.
2019-11-27 19:28:25 (12056): Enabling VM Network Access.
2019-11-27 19:28:25 (12056): Disabling USB Support for VM.
2019-11-27 19:28:25 (12056): Disabling COM Port Support for VM.
2019-11-27 19:28:25 (12056): Disabling LPT Port Support for VM.
2019-11-27 19:28:25 (12056): Disabling Audio Support for VM.
2019-11-27 19:28:25 (12056): Disabling Clipboard Support for VM.
2019-11-27 19:28:25 (12056): Disabling Drag and Drop Support for VM.
2019-11-27 19:28:26 (12056): Adding storage controller(s) to VM.
2019-11-27 19:28:26 (12056): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2019-11-27 19:28:26 (12056): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-11-27 19:28:26 (12056): Enabling shared directory for VM.
2019-11-27 19:28:26 (12056): Starting VM. (boinc_9043fb414ce4e4a6, slot#5)
2019-11-27 19:28:28 (12056): Successfully started VM. (PID = '13210')
2019-11-27 19:28:28 (12056): Reporting VM Process ID to BOINC.
2019-11-27 19:28:28 (12056): Guest Log: BIOS: VirtualBox 5.1.8
2019-11-27 19:28:28 (12056): VM state change detected. (old = 'poweroff', new = 'running')
2019-11-27 19:28:28 (12056): Preference change detected
2019-11-27 19:28:28 (12056): Setting CPU throttle for VM. (75%)
2019-11-27 19:28:28 (12056): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2019-11-27 19:28:30 (12056): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-11-27 19:28:30 (12056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2019-11-27 19:28:30 (12056): Guest Log: BIOS: Boot from Hard Disk 0 failed
2019-11-27 19:28:30 (12056): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2019-11-27 19:28:30 (12056): Guest Log: BIOS: Booting from CD-ROM...
2019-11-27 19:28:32 (12056): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-11-27 19:28:32 (12056): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2019-11-27 19:28:49 (12056): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-11-27 19:28:49 (12056): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-11-27 19:28:52 (12056): Guest Log: net.ipv4.ip_forward = 1
2019-11-27 19:28:52 (12056): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2019-11-27 19:28:52 (12056): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-11-27 19:28:52 (12056): Guest Log: sysctl: "cannot stat %s" is an unknown key
2019-11-27 19:28:52 (12056): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-11-27 19:28:52 (12056): Guest Log: Segmentation fault
2019-11-27 19:28:53 (12056): Guest Log: automount ...
2019-11-27 19:28:56 (12056): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2019-11-27 19:28:58 (12056): Guest Log: automount over.
2019-11-27 19:28:58 (12056): Guest Log: Setting hostname to boot2docker Done.
2019-11-27 19:28:58 (12056): Guest Log: Wed Nov 27 19:28:56 UTC 2019 dhcp -------------------------------
2019-11-27 19:29:04 (12056): Guest Log: Wed Nov 27 19:29:01 UTC 2019 dhcp -------------------------------
2019-11-27 19:29:04 (12056): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-11-27 19:29:04 (12056): Guest Log: 00:00:00.000760 main     Log opened 2019-11-27T19:29:02.454248000Z
2019-11-27 19:29:04 (12056): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-11-27 19:29:04 (12056): Guest Log: 00:00:00.004481 main     OS Product: Linux
2019-11-27 19:29:04 (12056): Guest Log: 00:00:00.004556 main     OS Release: 4.1.19-boot2docker
2019-11-27 19:29:04 (12056): Guest Log: 00:00:00.004619 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-11-27 19:29:04 (12056): Guest Log: 00:00:00.004674 main     Executable: /sbin/VBoxService
2019-11-27 19:29:04 (12056): Guest Log: 00:00:00.004676 main     Process ID: 767
2019-11-27 19:29:04 (12056): Guest Log: 00:00:00.004677 main     Package type: LINUX_64BITS_GENERIC
2019-11-27 19:29:04 (12056): Guest Log: 00:00:00.000760 main     Log opened 2019-11-27T19:29:02.454248000Z
2019-11-27 19:29:04 (12056): Guest Log: 000:00:00.008623 main     5.0.16 r105871 started. Verbose level = 0
2019-11-27 19:29:04 (12056): Guest Log: 0:00:00.004481 main     OS Product: Linux
2019-11-27 19:29:04 (12056): Guest Log: 00:00:00.004556 main     OS Release: 4.1.19-boot2docker
2019-11-27 19:29:04 (12056): Guest Log: 00:00:00.004619 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-11-27 19:29:04 (12056): Guest Log: 00:00:00.004674 main     Executable: /sbin/VBoxService
2019-11-27 19:29:04 (12056): Guest Log: 00:00:00.004676 main     Process ID: 767
2019-11-27 19:29:04 (12056): Guest Log: 00:00:00.036421 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2019-11-27 19:29:04 (12056): Guest Log: 00:00:00.036676 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2019-11-27 19:29:04 (12056): Guest Log: 00:00:00.004677 main     Package type: LINUX_64BITS_GENERIC
2019-11-27 19:29:04 (12056): Guest Log: 00:00:00.008623 main     5.0.16 r105871 started. Verbose level = 0
2019-11-27 19:29:05 (12056): Guest Log: Mounting BOINC shared/...
2019-11-27 19:29:05 (12056): Guest Log: -------------------
2019-11-27 19:29:05 (12056): Guest Log: Thu Nov 28 00:29:05 UTC 2019
2019-11-27 19:29:09 (12056): Guest Log: 00:00:05.044849 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2019-11-27 19:29:10 (12056): Guest Log: Thu Nov 28 00:29:10 UTC 2019
2019-11-27 19:29:10 (12056): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2019-11-27 19:29:10 (12056): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2019-11-27 19:29:10 (12056): Guest Log:     inet 127.0.0.1/8 scope host lo
2019-11-27 19:29:10 (12056): Guest Log:        valid_lft forever preferred_lft forever
2019-11-27 19:29:10 (12056): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2019-11-27 19:29:10 (12056): Guest Log:     link/ether 3a:b4:03:04:5e:f8 brd ff:ff:ff:ff:ff:ff
2019-11-27 19:29:10 (12056): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2019-11-27 19:29:10 (12056): Guest Log:     link/ether 08:00:27:ec:c2:74 brd ff:ff:ff:ff:ff:ff
2019-11-27 19:29:10 (12056): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2019-11-27 19:29:10 (12056): Guest Log:        valid_lft forever preferred_lft forever
2019-11-27 19:29:10 (12056): Guest Log: -------------------
2019-11-27 19:29:10 (12056): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2019-11-27 19:29:10 (12056): Guest Log: Waiting for Docker daemon to start...
2019-11-27 19:29:12 (12056): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2019-11-27 19:29:12 (12056): Guest Log: Running boinc_app...
2019-11-27 19:29:12 (12056): Guest Log: Importing Docker image from BOINC...
2019-11-27 19:29:12 (12056): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-11-27 19:29:12 (12056): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /
2019-11-27 19:29:12 (12056): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-11-27 19:29:12 (12056): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-11-27 19:29:12 (12056): Guest Log: shared                  916.3G     80.1G    836.2G   9% /root/shared
2019-11-27 19:29:12 (12056): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /var/lib/docker/aufs
2019-11-27 19:29:14 (12056): Guest Log: 00:00:10.092216 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2019-11-27 19:29:29 (12056): Guest Log: doing docker load...
2019-11-27 19:29:53 (12056): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-11-27 19:29:53 (12056): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2019-11-27 19:29:53 (12056): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-11-27 19:29:53 (12056): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-11-27 19:29:53 (12056): Guest Log: shared                  916.3G     79.9G    836.3G   9% /root/shared
2019-11-27 19:29:53 (12056): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /var/lib/docker/aufs
2019-11-27 19:29:53 (12056): Guest Log:               total        used        free      shared  buff/cache   available
2019-11-27 19:29:53 (12056): Guest Log: Mem:           3007          51        2253         663         701        2254
2019-11-27 19:29:53 (12056): Guest Log: Swap:           702           0         702
2019-11-27 19:29:53 (12056): Guest Log: Building apps directory...
2019-11-27 19:31:59 (12056): Guest Log: Prerun diagnostics...
2019-11-27 19:31:59 (12056): Guest Log: REPOSITORY                    TAG                 IMAGE ID            CREATED             SIZE
2019-11-27 19:31:59 (12056): Guest Log: nanohub_apps_share64_matlab   4                   32c863520615        24 months ago       488.2 MB
2019-11-27 19:31:59 (12056): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2019-11-27 19:31:59 (12056): Guest Log: 499.0M	/var/lib/docker
2019-11-27 19:31:59 (12056): Guest Log:               total        used        free      shared  buff/cache   available
2019-11-27 19:31:59 (12056): Guest Log: Mem:           3007          55        2238         663         713        2248
2019-11-27 19:31:59 (12056): Guest Log: Swap:           702           0         702
2019-11-27 19:31:59 (12056): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2019-11-27 19:31:59 (12056): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /
2019-11-27 19:31:59 (12056): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2019-11-27 19:31:59 (12056): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2019-11-27 19:31:59 (12056): Guest Log: shared                  916.3G     80.5G    835.8G   9% /root/shared
2019-11-27 19:31:59 (12056): Guest Log: tmpfs                     2.6G    663.1M      2.0G  24% /var/lib/docker/aufs
2019-11-27 19:32:00 (12056): Guest Log: Running... 
2019-11-27 19:32:01 (12056): Guest Log: 07578714_03.boinc
2019-11-27 19:32:01 (12056): Guest Log: 07578714_03.sh
2019-11-27 19:38:22 (12056): Guest Log: boinc_app exited (0)
2019-11-27 19:38:22 (12056): Guest Log: Saving results...
2019-11-27 19:38:22 (12056): Guest Log: 07578714_03_output.tar.gz
2019-11-27 19:38:22 (12056): VM Completion File Detected.
2019-11-27 19:38:22 (12056): Powering off VM.
2019-11-27 19:38:23 (12056): Successfully stopped VM.
2019-11-27 19:38:23 (12056): Deregistering VM. (boinc_9043fb414ce4e4a6, slot#5)
2019-11-27 19:38:23 (12056): Removing network bandwidth throttle group from VM.
2019-11-27 19:38:24 (12056): Removing storage controller(s) from VM.
2019-11-27 19:38:24 (12056): Removing VM from VirtualBox.
2019-11-27 19:38:24 (12056): Removing virtual ISO 9660 disk from VirtualBox.
19:38:29 (12056): called boinc_finish(0)

</stderr_txt>
]]>


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