Task 83557
| Name | 06410601_011_1 |
| Workunit | 62847 |
| Created | 24 Dec 2017, 13:41:06 UTC |
| Sent | 24 Dec 2017, 13:43:23 UTC |
| Report deadline | 24 Dec 2017, 21:43:23 UTC |
| Received | 24 Dec 2017, 15:52:38 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 217 |
| Run time | 5 min 35 sec |
| CPU time | 2 min 26 sec |
| Validate state | Valid |
| Credit | 1.43 |
| Device peak FLOPS | 2.24 GFLOPS |
| Application version | boinc2docker v1.11 (vbox64_mt) x86_64-pc-linux-gnu |
| Peak working set size | 93.71 MB |
| Peak swap size | 3.49 GB |
| Peak disk usage | 989.48 MB |
Stderr output
<core_client_version>7.4.23</core_client_version>
<![CDATA[
<stderr_txt>
2017-12-24 10:43:33 (28560): vboxwrapper (7.7.26197): starting
2017-12-24 10:43:33 (28560): Feature: Checkpoint interval offset (183 seconds)
2017-12-24 10:43:33 (28560): Detected: VirtualBox VboxManage Interface (Version: 5.1.8)
2017-12-24 10:43:33 (28560): Detected: Minimum checkpoint interval (600.000000 seconds)
2017-12-24 10:43:40 (28560): Create VM. (boinc_920863ba5d1783aa, slot#1)
2017-12-24 10:43:40 (28560): Updating drive controller type and model for desired configuration.
2017-12-24 10:43:41 (28560): Setting Memory Size for VM. (3072MB)
2017-12-24 10:43:41 (28560): Setting CPU Count for VM. (1)
2017-12-24 10:43:42 (28560): Setting Chipset Options for VM.
2017-12-24 10:43:42 (28560): Setting Boot Options for VM.
2017-12-24 10:43:42 (28560): Setting Network Configuration for NAT.
2017-12-24 10:43:42 (28560): Enabling VM Network Access.
2017-12-24 10:43:42 (28560): Disabling USB Support for VM.
2017-12-24 10:43:42 (28560): Disabling COM Port Support for VM.
2017-12-24 10:43:42 (28560): Disabling LPT Port Support for VM.
2017-12-24 10:43:42 (28560): Disabling Audio Support for VM.
2017-12-24 10:43:43 (28560): Disabling Clipboard Support for VM.
2017-12-24 10:43:43 (28560): Disabling Drag and Drop Support for VM.
2017-12-24 10:43:43 (28560): Adding storage controller(s) to VM.
2017-12-24 10:43:43 (28560): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2017-12-24 10:43:43 (28560): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2017-12-24 10:43:43 (28560): Enabling shared directory for VM.
2017-12-24 10:43:44 (28560): Starting VM. (boinc_920863ba5d1783aa, slot#1)
2017-12-24 10:43:45 (28560): Successfully started VM. (PID = '29763')
2017-12-24 10:43:45 (28560): Reporting VM Process ID to BOINC.
2017-12-24 10:43:46 (28560): Guest Log: BIOS: VirtualBox 5.1.8
2017-12-24 10:43:46 (28560): VM state change detected. (old = 'poweroff', new = 'running')
2017-12-24 10:43:46 (28560): Preference change detected
2017-12-24 10:43:46 (28560): Setting CPU throttle for VM. (75%)
2017-12-24 10:43:47 (28560): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2017-12-24 10:43:47 (28560): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2017-12-24 10:43:47 (28560): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2017-12-24 10:43:47 (28560): Guest Log: BIOS: Boot from Hard Disk 0 failed
2017-12-24 10:43:47 (28560): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2017-12-24 10:43:47 (28560): Guest Log: BIOS: Booting from CD-ROM...
2017-12-24 10:43:52 (28560): Guest Log: BIOS: KBD: unsupported int 16h function 03
2017-12-24 10:43:52 (28560): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000
2017-12-24 10:44:12 (28560): Guest Log: net.ipv4.ip_forward = 1
2017-12-24 10:44:12 (28560): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2017-12-24 10:44:12 (28560): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2017-12-24 10:44:12 (28560): Guest Log: sysctl: "cannot stat %s" is an unknown key
2017-12-24 10:44:12 (28560): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2017-12-24 10:44:12 (28560): Guest Log: Segmentation fault
2017-12-24 10:44:14 (28560): Guest Log: automount ...
2017-12-24 10:44:14 (28560): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2017-12-24 10:44:14 (28560): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2017-12-24 10:44:14 (28560): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2017-12-24 10:44:14 (28560): Guest Log: automount over.
2017-12-24 10:44:15 (28560): Guest Log: [1;32mSetting hostname to [1;35mboot2docker[0;39m [1;32mDone.[0;39m
2017-12-24 10:44:15 (28560): Guest Log: Sun Dec 24 10:44:12 UTC 2017 dhcp -------------------------------
2017-12-24 10:44:20 (28560): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2017-12-24 10:44:20 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1 (1266)
2017-12-24 10:44:20 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1/event1 (1267)
2017-12-24 10:44:20 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00 (1270)
2017-12-24 10:44:20 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00/power_supply/AC (1271)
2017-12-24 10:44:20 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/device:01 (1273)
2017-12-24 10:44:20 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6 (1274)
2017-12-24 10:44:20 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6/event5 (1275)
2017-12-24 10:44:20 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1276)
2017-12-24 10:44:21 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1277)
2017-12-24 10:44:21 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1278)
2017-12-24 10:44:21 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1279)
2017-12-24 10:44:21 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1280)
2017-12-24 10:44:21 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1281)
2017-12-24 10:44:21 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1282)
2017-12-24 10:44:21 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1283)
2017-12-24 10:44:21 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1284)
2017-12-24 10:44:21 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1286)
2017-12-24 10:44:21 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1287)
2017-12-24 10:44:21 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1288)
2017-12-24 10:44:21 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1289)
2017-12-24 10:44:21 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1290)
2017-12-24 10:44:21 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1291)
2017-12-24 10:44:21 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1292)
2017-12-24 10:44:21 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1293)
2017-12-24 10:44:21 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1294)
2017-12-24 10:44:21 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1296)
2017-12-24 10:44:21 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1297)
2017-12-24 10:44:21 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1298)
2017-12-24 10:44:21 (28560): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1299)
2017-12-24 10:44:21 (28560): Guest Log: Sun Dec 24 10:44:18 UTC 2017 dhcp -------------------------------
2017-12-24 10:44:22 (28560): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log
2017-12-24 10:44:22 (28560): Guest Log: 00:00:00.000670 main Log opened 2017-12-24T10:44:19.527521000Z
2017-12-24 10:44:22 (28560): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log
2017-12-24 10:44:22 (28560): Guest Log: 00:00:00.000670 main Log opened 2017-12-24T10:44:19.527521000Z
2017-12-24 10:44:22 (28560): Guest Log: 00:00:00.006304 main OS Product: Linux
2017-12-24 10:44:22 (28560): Guest Log: 00:00:00.006376 main OS Release: 4.1.19-boot2docker
2017-12-24 10:44:22 (28560): Guest Log: 00:00:00.006431 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2017-12-24 10:44:22 (28560): Guest Log: 00:00:00.006483 main Executable: /sbin/VBoxService
2017-12-24 10:44:22 (28560): Guest Log: 00:00:00.006485 main Process ID: 744
2017-12-24 10:44:22 (28560): Guest Log: 00:00:00.006486 main Package type: LINUX_64BITS_GENERIC
2017-12-24 10:44:22 (28560): Guest Log: 00:00:00:00:00.007554 main 5.0.16 r105871 started. Verbose level = 0
2017-12-24 10:44:22 (28560): Guest Log: 00.006304 main OS Product: Linux
2017-12-24 10:44:22 (28560): Guest Log: 00:00:00.006376 main OS Release: 4.1.19-boot2docker
2017-12-24 10:44:22 (28560): Guest Log: 00:00:00.006431 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2017-12-24 10:44:22 (28560): Guest Log: 00:00:00.006483 main Executable: /sbin/VBoxService
2017-12-24 10:44:22 (28560): Guest Log: 00:00:00.006485 main Process ID: 744
2017-12-24 10:44:22 (28560): Guest Log: 00:00:00.006486 main Package type: LINUX_64BITS_GENERIC
2017-12-24 10:44:22 (28560): Guest Log: 00:00:00.007554 main 5.0.16 r105871 started. Verbose level = 0
2017-12-24 10:44:22 (28560): Guest Log: 00:00:00.103129 vminfo rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2017-12-24 10:44:22 (28560): Guest Log: 00:00:00.103306 vminfo Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2017-12-24 10:44:24 (28560): Guest Log: Mounting BOINC shared/...
2017-12-24 10:44:24 (28560): Guest Log: -------------------
2017-12-24 10:44:24 (28560): Guest Log: Sun Dec 24 15:44:22 UTC 2017
2017-12-24 10:44:27 (28560): Guest Log: 00:00:05.106718 vminfo Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2017-12-24 10:44:28 (28560): Guest Log: Sun Dec 24 15:44:27 UTC 2017
2017-12-24 10:44:29 (28560): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default
2017-12-24 10:44:29 (28560): Guest Log: link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2017-12-24 10:44:29 (28560): Guest Log: inet 127.0.0.1/8 scope host lo
2017-12-24 10:44:29 (28560): Guest Log: valid_lft forever preferred_lft forever
2017-12-24 10:44:29 (28560): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default
2017-12-24 10:44:29 (28560): Guest Log: link/ether 4a:ab:f1:c7:51:c4 brd ff:ff:ff:ff:ff:ff
2017-12-24 10:44:29 (28560): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2017-12-24 10:44:29 (28560): Guest Log: link/ether 08:00:27:cd:d4:f0 brd ff:ff:ff:ff:ff:ff
2017-12-24 10:44:29 (28560): Guest Log: inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2017-12-24 10:44:29 (28560): Guest Log: valid_lft forever preferred_lft forever
2017-12-24 10:44:29 (28560): Guest Log: -------------------
2017-12-24 10:44:29 (28560): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2017-12-24 10:44:29 (28560): Guest Log: Waiting for Docker daemon to start...
2017-12-24 10:44:31 (28560): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE
2017-12-24 10:44:31 (28560): Guest Log: Running boinc_app...
2017-12-24 10:44:31 (28560): Guest Log: Importing Docker image from BOINC...
2017-12-24 10:44:31 (28560): Guest Log: Filesystem Size Used Available Use% Mounted on
2017-12-24 10:44:31 (28560): Guest Log: tmpfs 2.6G 164.1M 2.5G 6% /
2017-12-24 10:44:31 (28560): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2017-12-24 10:44:31 (28560): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2017-12-24 10:44:31 (28560): Guest Log: shared 916.3G 74.9G 841.4G 8% /root/shared
2017-12-24 10:44:31 (28560): Guest Log: tmpfs 2.6G 164.1M 2.5G 6% /var/lib/docker/aufs
2017-12-24 10:44:32 (28560): Guest Log: 00:00:10.107573 vminfo Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2017-12-24 10:44:48 (28560): Guest Log: doing docker load...
2017-12-24 10:45:12 (28560): Guest Log: Filesystem Size Used Available Use% Mounted on
2017-12-24 10:45:12 (28560): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /
2017-12-24 10:45:12 (28560): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2017-12-24 10:45:12 (28560): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2017-12-24 10:45:12 (28560): Guest Log: shared 916.3G 74.6G 841.6G 8% /root/shared
2017-12-24 10:45:12 (28560): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /var/lib/docker/aufs
2017-12-24 10:45:12 (28560): Guest Log: total used free shared buff/cache available
2017-12-24 10:45:12 (28560): Guest Log: Mem: 3007 52 2253 663 701 2254
2017-12-24 10:45:12 (28560): Guest Log: Swap: 702 0 702
2017-12-24 10:45:12 (28560): Guest Log: Building apps directory...
2017-12-24 10:45:16 (28560): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2017-12-24 10:46:01 (28560): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077_links.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2017-12-24 10:46:01 (28560): Guest Log: mv /root/shared/appsSource/rappture /root/shared/apps/share64/debian7/environ.d
2017-12-24 10:48:57 (28560): Guest Log: Prerun diagnostics...
2017-12-24 10:48:57 (28560): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE
2017-12-24 10:48:57 (28560): Guest Log: nanohub_apps_share64_matlab 4 32c863520615 2 weeks ago 488.2 MB
2017-12-24 10:48:57 (28560): Guest Log: CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
2017-12-24 10:48:57 (28560): Guest Log: 499.0M /var/lib/docker
2017-12-24 10:48:57 (28560): Guest Log: total used free shared buff/cache available
2017-12-24 10:48:57 (28560): Guest Log: Mem: 3007 54 2240 663 712 2249
2017-12-24 10:48:57 (28560): Guest Log: Swap: 702 0 702
2017-12-24 10:48:57 (28560): Guest Log: Filesystem Size Used Available Use% Mounted on
2017-12-24 10:48:57 (28560): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /
2017-12-24 10:48:57 (28560): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2017-12-24 10:48:57 (28560): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2017-12-24 10:48:57 (28560): Guest Log: shared 916.3G 74.8G 841.5G 8% /root/shared
2017-12-24 10:48:57 (28560): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /var/lib/docker/aufs
2017-12-24 10:48:57 (28560): Guest Log: Running...
2017-12-24 10:48:58 (28560): Guest Log: 06410601_011.boinc
2017-12-24 10:48:58 (28560): Guest Log: 06410601_011.sh
2017-12-24 10:49:27 (28560): Guest Log: boinc_app exited (0)
2017-12-24 10:49:27 (28560): Guest Log: Saving results...
2017-12-24 10:49:27 (28560): Guest Log: 06410601_011_output.tar.gz
2017-12-24 10:49:27 (28560): VM Completion File Detected.
2017-12-24 10:49:27 (28560): Powering off VM.
2017-12-24 10:49:28 (28560): Successfully stopped VM.
2017-12-24 10:49:28 (28560): Deregistering VM. (boinc_920863ba5d1783aa, slot#1)
2017-12-24 10:49:28 (28560): Removing network bandwidth throttle group from VM.
2017-12-24 10:49:28 (28560): Removing storage controller(s) from VM.
2017-12-24 10:49:28 (28560): Removing VM from VirtualBox.
2017-12-24 10:49:28 (28560): Removing virtual ISO 9660 disk from VirtualBox.
10:49:33 (28560): called boinc_finish(0)
</stderr_txt>
]]>
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