Task 99380
| Name | 06419837_017_3 |
| Workunit | 74146 |
| Created | 6 Jan 2018, 14:33:00 UTC |
| Sent | 6 Jan 2018, 14:33:06 UTC |
| Report deadline | 6 Jan 2018, 22:33:06 UTC |
| Received | 6 Jan 2018, 14:59:51 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 218 |
| Run time | 7 min 48 sec |
| CPU time | 2 min 43 sec |
| Validate state | Valid |
| Credit | 2.39 |
| Device peak FLOPS | 2.24 GFLOPS |
| Application version | boinc2docker v1.11 (vbox64_mt) x86_64-pc-linux-gnu |
| Peak working set size | 93.88 MB |
| Peak swap size | 3.43 GB |
| Peak disk usage | 922.66 MB |
Stderr output
<core_client_version>7.4.23</core_client_version>
<![CDATA[
<stderr_txt>
2018-01-06 09:50:36 (26206): vboxwrapper (7.7.26197): starting
2018-01-06 09:50:36 (26206): Feature: Checkpoint interval offset (108 seconds)
2018-01-06 09:50:36 (26206): Detected: VirtualBox VboxManage Interface (Version: 5.1.8)
2018-01-06 09:50:36 (26206): Detected: Minimum checkpoint interval (600.000000 seconds)
2018-01-06 09:50:36 (26206): Create VM. (boinc_9e3b4895c7626cdc, slot#3)
2018-01-06 09:50:36 (26206): Updating drive controller type and model for desired configuration.
2018-01-06 09:50:41 (26206): Setting Memory Size for VM. (3072MB)
2018-01-06 09:50:41 (26206): Setting CPU Count for VM. (1)
2018-01-06 09:50:41 (26206): Setting Chipset Options for VM.
2018-01-06 09:50:41 (26206): Setting Boot Options for VM.
2018-01-06 09:50:41 (26206): Setting Network Configuration for NAT.
2018-01-06 09:50:41 (26206): Enabling VM Network Access.
2018-01-06 09:50:41 (26206): Disabling USB Support for VM.
2018-01-06 09:50:41 (26206): Disabling COM Port Support for VM.
2018-01-06 09:50:41 (26206): Disabling LPT Port Support for VM.
2018-01-06 09:50:41 (26206): Disabling Audio Support for VM.
2018-01-06 09:50:41 (26206): Disabling Clipboard Support for VM.
2018-01-06 09:50:41 (26206): Disabling Drag and Drop Support for VM.
2018-01-06 09:50:41 (26206): Adding storage controller(s) to VM.
2018-01-06 09:50:41 (26206): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2018-01-06 09:50:42 (26206): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2018-01-06 09:50:42 (26206): Enabling shared directory for VM.
2018-01-06 09:50:42 (26206): Starting VM. (boinc_9e3b4895c7626cdc, slot#3)
2018-01-06 09:50:43 (26206): Successfully started VM. (PID = '27048')
2018-01-06 09:50:43 (26206): Reporting VM Process ID to BOINC.
2018-01-06 09:50:43 (26206): Guest Log: BIOS: VirtualBox 5.1.8
2018-01-06 09:50:43 (26206): VM state change detected. (old = 'poweroff', new = 'running')
2018-01-06 09:50:44 (26206): Preference change detected
2018-01-06 09:50:44 (26206): Setting CPU throttle for VM. (75%)
2018-01-06 09:50:44 (26206): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2018-01-06 09:50:46 (26206): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2018-01-06 09:50:46 (26206): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2018-01-06 09:50:46 (26206): Guest Log: BIOS: Boot from Hard Disk 0 failed
2018-01-06 09:50:46 (26206): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2018-01-06 09:50:46 (26206): Guest Log: BIOS: Booting from CD-ROM...
2018-01-06 09:50:48 (26206): Guest Log: BIOS: KBD: unsupported int 16h function 03
2018-01-06 09:50:48 (26206): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000
2018-01-06 09:51:05 (26206): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2018-01-06 09:51:05 (26206): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2018-01-06 09:51:07 (26206): Guest Log: net.ipv4.ip_forward = 1
2018-01-06 09:51:07 (26206): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2018-01-06 09:51:07 (26206): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-01-06 09:51:07 (26206): Guest Log: sysctl: "cannot stat %s" is an unknown key
2018-01-06 09:51:07 (26206): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2018-01-06 09:51:07 (26206): Guest Log: Segmentation fault
2018-01-06 09:51:08 (26206): Guest Log: automount ...
2018-01-06 09:51:09 (26206): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2018-01-06 09:51:09 (26206): Guest Log: automount over.
2018-01-06 09:51:09 (26206): Guest Log: [1;32mSetting hostname to [1;35mboot2docker[0;39m [1;32mDone.[0;39m
2018-01-06 09:51:09 (26206): Guest Log: Sat Jan 6 09:51:07 UTC 2018 dhcp -------------------------------
2018-01-06 09:51:15 (26206): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1064)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00 (1282)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXCPU:00 (1283)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00 (1284)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0 (1285)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0/event0 (1286)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00 (1287)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1 (1288)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1/event1 (1289)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00 (1290)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00 (1291)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00 (1292)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00/power_supply/AC (1293)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00 (1294)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/device:01 (1295)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input7 (1296)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input7/event6 (1297)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1298)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1299)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1300)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1301)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1302)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1303)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1304)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1305)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1306)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00 (1307)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1308)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1309)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1310)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1311)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1312)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1313)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1314)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1315)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1316)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:02 (1317)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1318)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1319)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1320)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1321)
2018-01-06 09:51:15 (26206): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:01 (1322)
2018-01-06 09:51:16 (26206): Guest Log: Sat Jan 6 09:51:13 UTC 2018 dhcp -------------------------------
2018-01-06 09:51:16 (26206): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log
2018-01-06 09:51:16 (26206): Guest Log: 00:00:00.000657 main Log opened 2018-01-06T09:51:14.369030000Z
2018-01-06 09:51:17 (26206): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log
2018-01-06 09:51:17 (26206): Guest Log: 00:00:00.034685 main OS Product: Linux
2018-01-06 09:51:17 (26206): Guest Log: 00:00:00.034760 main OS Release: 4.1.19-boot2docker
2018-01-06 09:51:17 (26206): Guest Log: 00:00:00.034820 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-01-06 09:51:17 (26206): Guest Log: 00:00:00.034878 main Executable: /sbin/VBoxService
2018-01-06 09:51:17 (26206): Guest Log: 00:00:00.034880 main Process ID: 750
2018-01-06 09:51:17 (26206): Guest Log: 00:00:00.034881 main Package type: LINUX_64BITS_GENERIC
2018-01-06 09:51:17 (26206): Guest Log: 00:00:00.000657 main L00:00:00.036320 main 5.0.16 r105871 started. Verbose level = 0
2018-01-06 09:51:17 (26206): Guest Log: og opened 2018-01-06T09:51:14.369030000Z
2018-01-06 09:51:17 (26206): Guest Log: 00:00:00.034685 main OS Product: Linux
2018-01-06 09:51:17 (26206): Guest Log: 00:00:00.034760 main OS Release: 4.1.19-boot2docker
2018-01-06 09:51:17 (26206): Guest Log: 00:00:00.034820 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2018-01-06 09:51:17 (26206): Guest Log: 0000:00:00.067979 vminfo rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2018-01-06 09:51:17 (26206): Guest Log: 00:00:00.068143 vminfo Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2018-01-06 09:51:17 (26206): Guest Log: :00:00.034878 main Executable: /sbin/VBoxService
2018-01-06 09:51:17 (26206): Guest Log: 00:00:00.034880 main Process ID: 750
2018-01-06 09:51:17 (26206): Guest Log: 00:00:00.034881 main Package type: LINUX_64BITS_GENERIC
2018-01-06 09:51:17 (26206): Guest Log: 00:00:00.036320 main 5.0.16 r105871 started. Verbose level = 0
2018-01-06 09:51:17 (26206): Guest Log: Mounting BOINC shared/...
2018-01-06 09:51:17 (26206): Guest Log: -------------------
2018-01-06 09:51:17 (26206): Guest Log: Sat Jan 6 14:51:17 UTC 2018
2018-01-06 09:51:22 (26206): Guest Log: 00:00:05.078832 vminfo Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2018-01-06 09:51:22 (26206): Guest Log: Sat Jan 6 14:51:22 UTC 2018
2018-01-06 09:51:22 (26206): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default
2018-01-06 09:51:22 (26206): Guest Log: link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2018-01-06 09:51:22 (26206): Guest Log: inet 127.0.0.1/8 scope host lo
2018-01-06 09:51:22 (26206): Guest Log: valid_lft forever preferred_lft forever
2018-01-06 09:51:22 (26206): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default
2018-01-06 09:51:22 (26206): Guest Log: link/ether 7e:68:ba:dd:3e:f8 brd ff:ff:ff:ff:ff:ff
2018-01-06 09:51:22 (26206): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2018-01-06 09:51:22 (26206): Guest Log: link/ether 08:00:27:a5:3c:12 brd ff:ff:ff:ff:ff:ff
2018-01-06 09:51:22 (26206): Guest Log: inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2018-01-06 09:51:22 (26206): Guest Log: valid_lft forever preferred_lft forever
2018-01-06 09:51:22 (26206): Guest Log: -------------------
2018-01-06 09:51:22 (26206): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2018-01-06 09:51:22 (26206): Guest Log: Waiting for Docker daemon to start...
2018-01-06 09:51:26 (26206): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE
2018-01-06 09:51:26 (26206): Guest Log: Running boinc_app...
2018-01-06 09:51:26 (26206): Guest Log: Importing Docker image from BOINC...
2018-01-06 09:51:26 (26206): Guest Log: Filesystem Size Used Available Use% Mounted on
2018-01-06 09:51:26 (26206): Guest Log: tmpfs 2.6G 164.1M 2.5G 6% /
2018-01-06 09:51:26 (26206): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2018-01-06 09:51:26 (26206): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2018-01-06 09:51:26 (26206): Guest Log: shared 916.3G 72.8G 843.4G 8% /root/shared
2018-01-06 09:51:26 (26206): Guest Log: tmpfs 2.6G 164.1M 2.5G 6% /var/lib/docker/aufs
2018-01-06 09:51:27 (26206): Guest Log: 00:00:10.096470 vminfo Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2018-01-06 09:51:42 (26206): Guest Log: doing docker load...
2018-01-06 09:52:06 (26206): Guest Log: Filesystem Size Used Available Use% Mounted on
2018-01-06 09:52:06 (26206): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /
2018-01-06 09:52:06 (26206): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2018-01-06 09:52:06 (26206): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2018-01-06 09:52:06 (26206): Guest Log: shared 916.3G 72.9G 843.4G 8% /root/shared
2018-01-06 09:52:06 (26206): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /var/lib/docker/aufs
2018-01-06 09:52:06 (26206): Guest Log: total used free shared buff/cache available
2018-01-06 09:52:06 (26206): Guest Log: Mem: 3007 50 2254 663 701 2255
2018-01-06 09:52:06 (26206): Guest Log: Swap: 702 0 702
2018-01-06 09:52:06 (26206): Guest Log: Building apps directory...
2018-01-06 09:52:17 (26206): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2018-01-06 09:52:25 (26206): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077_links.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2018-01-06 09:52:25 (26206): Guest Log: mv /root/shared/appsSource/rappture /root/shared/apps/share64/debian7/environ.d
2018-01-06 09:57:33 (26206): Guest Log: Prerun diagnostics...
2018-01-06 09:57:33 (26206): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE
2018-01-06 09:57:33 (26206): Guest Log: nanohub_apps_share64_matlab 4 32c863520615 4 weeks ago 488.2 MB
2018-01-06 09:57:33 (26206): Guest Log: CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
2018-01-06 09:57:33 (26206): Guest Log: 499.0M /var/lib/docker
2018-01-06 09:57:33 (26206): Guest Log: total used free shared buff/cache available
2018-01-06 09:57:33 (26206): Guest Log: Mem: 3007 53 2242 663 711 2250
2018-01-06 09:57:33 (26206): Guest Log: Swap: 702 0 702
2018-01-06 09:57:33 (26206): Guest Log: Filesystem Size Used Available Use% Mounted on
2018-01-06 09:57:33 (26206): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /
2018-01-06 09:57:33 (26206): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm
2018-01-06 09:57:33 (26206): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup
2018-01-06 09:57:33 (26206): Guest Log: shared 916.3G 77.7G 838.6G 8% /root/shared
2018-01-06 09:57:33 (26206): Guest Log: tmpfs 2.6G 663.1M 2.0G 24% /var/lib/docker/aufs
2018-01-06 09:57:33 (26206): Guest Log: Running...
2018-01-06 09:57:33 (26206): Guest Log: 06419837_017.boinc
2018-01-06 09:57:33 (26206): Guest Log: 06419837_017.sh
2018-01-06 09:58:26 (26206): Guest Log: boinc_app exited (0)
2018-01-06 09:58:27 (26206): Guest Log: Saving results...
2018-01-06 09:58:27 (26206): Guest Log: 06419837_017_output.tar.gz
2018-01-06 09:58:27 (26206): VM Completion File Detected.
2018-01-06 09:58:27 (26206): Powering off VM.
2018-01-06 09:58:29 (26206): Successfully stopped VM.
2018-01-06 09:58:29 (26206): Deregistering VM. (boinc_9e3b4895c7626cdc, slot#3)
2018-01-06 09:58:29 (26206): Removing network bandwidth throttle group from VM.
2018-01-06 09:58:31 (26206): Removing storage controller(s) from VM.
2018-01-06 09:58:31 (26206): Removing VM from VirtualBox.
2018-01-06 09:58:32 (26206): Removing virtual ISO 9660 disk from VirtualBox.
09:58:37 (26206): called boinc_finish(0)
</stderr_txt>
]]>
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